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Fabiana Dominiquini

dblp:01/1628 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2004
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › protein structure analysis › protein binding site analysis
protein interface analysis
0.012004
STING Contacts: a web-based application for identification and analysis of amino acid contacts within protein structure and across protein interfaces · Bioinform. 2004
Bioinformatics and computational biology
protein structure analysis
0.012004
STING Contacts: a web-based application for identification and analysis of amino acid contacts within protein structure and across protein interfaces · Bioinform. 2004

Methods — techniques the papers use, named apart from their topics

atomic contact calculation · 0.0
YearPublicationVenuePosition
2004 STING Contacts: a web-based application for identification and analysis of amino acid contacts within protein structure and across protein interfaces
abstract
UNLABELLED: Amino acid contacts in terms of atomic interactions are essential factors to be considered in the analysis of the structure of a protein and its complexes. Consequently, molecular biologists do require specific tools for the identification and visualization of all such contacts. Graphical contacts (GC) and interface forming residue graphical contacts (IFRgc) presented here, calculate atomic contacts among amino acids based on a table of predefined pairs of the atom types and their distances, and then display them using number of different forms. The inventory of currently listed contact types by GC and IFRgc include hydrogen bonds (in nine different flavors), hydrophobic interactions, charge-charge interactions, aromatic stacking and disulfide bonds. Such extensive catalog of the interactions, representing the forces that govern protein folding, stability and binding, is the key feature of these two applications. GC and IFRgc are part of STING Millennium Suite. AVAILABILITY: http://sms.cbi.cnptia.embrapa.br/SMS, http://trantor.bioc.columbia.edu/SMS, http://mirrors.rcsb.org//SMS, http://www.es.embnet.org/SMS and http://www.ar.embnet.org/SMS (Options: Graphical Contacts and IFR Graphical Contacts).
Adauto L. Mancini, Roberto H. Higa, Adilton G. Oliveira, Fabiana Dominiquini, Paula R. Kuser, Michel Eduardo Beleza Yamagishi, Roberto C. Togawa, Goran Neshich
Bioinform.4