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Stephanie Lien

dblp:07/7068 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2009
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
genomics		 0.112009
LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures · Bioinform. 2009
Bioinformatics and computational biology › genomics › variant annotation
SNP annotation		 0.112009
LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures · Bioinform. 2009
Bioinformatics and computational biology › structural bioinformatics › protein structure representation
protein structure visualization		 0.012009
LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures · Bioinform. 2009
Bioinformatics and computational biology
structural biology		 0.012009
LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures · Bioinform. 2009
YearPublicationVenuePosition
2009 LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures
abstract
SUMMARY: LS-SNP/PDB is a new WWW resource for genome-wide annotation of human non-synonymous (amino acid changing) SNPs. It serves high-quality protein graphics rendered with UCSF Chimera molecular visualization software. The system is kept up-to-date by an automated, high-throughput build pipeline that systematically maps human nsSNPs onto Protein Data Bank structures and annotates several biologically relevant features. AVAILABILITY: LS-SNP/PDB is available at (http://ls-snp.icm.jhu.edu/ls-snp-pdb) and via links from protein data bank (PDB) biology and chemistry tabs, UCSC Genome Browser Gene Details and SNP Details pages and PharmGKB Gene Variants Downloads/Cross-References pages.
Michael C. Ryan, Mark Diekhans, Stephanie Lien, Yun Liu 0013, Rachel Karchin
 Bioinform.3