Yuehaw Khoo

dblp:131/6764 · DBLP profile ↗
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8ranked-venue papers
1as first author
4since 2021 · last 2026
0000-0002-8472-8984ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Graphics, computer vision, multimedia, augmented reality and games · 4 · 1 first-author · 1 since 2021Artificial intelligence and machine learning · 3 · 2 since 2021Theory of computation · 1 · 1 since 2021
YearPublicationVenuePosition
2026 Subspace Method of Moments for Ab Initio 3-D Single Particle Cryo-EM Reconstruction
abstract
Cryo-electron microscopy (cryo-EM) is a widely used technique for recovering the three-dimensional (3-D) structure of biological molecules from a large number of experimentally generated noisy 2-D tomographic projection images of the 3-D structure, taken from unknown viewing angles. Through computationally intensive algorithms, these observed images are processed to reconstruct the 3-D structures. Many popular computational methods rely on estimating the unknown angles as part of the reconstruction process, which becomes particularly challenging at low signal-to-noise ratios. The method of moments offers an alternative approach that circumvents the estimation of viewing orientations of individual projection images by instead estimating the underlying distribution of the viewing angles, and is robust to noise given sufficiently many images. However, the method of moments typically entails computing higher-order moments of the projection images, incurring significant computational and memory costs. To mitigate this, we propose a new approach called the subspace method of moments (SubspaceMoM), which compresses the first three moments using data-driven low-rank tensor techniques as well as expansion into a suitable function basis. The compressed moments can be efficiently computed from the set of projection images using numerical quadrature and can be employed to jointly reconstruct the 3-D structure and the distribution of viewing orientations. We illustrate the practical applicability of SubspaceMoM through numerical experiments using up to the third-order moment on synthetic datasets with a simplified cryo-EM image formation model, which significantly improves the reconstruction resolution compared to previous MoM approaches.
Jeremy G. Hoskins, Yuehaw Khoo, Oscar Mickelin, Amit Singer, Yuguan Wang
SIAM J. Imaging Sci.2
2025 Robust Point Matching with Distance Profiles
abstract
Computational difficulty of quadratic matching and the Gromov-Wasserstein distance has led to various approximation and relaxation schemes. One of such methods, relying on the notion of distance profiles, has been widely used in practice, but its theoretical understanding is limited. By delving into the statistical complexity of the previously proposed method based on distance profiles, we show that it suffers from the curse of dimensionality unless we make certain assumptions on the underlying metric measure spaces. Building on this insight, we propose and analyze a modified matching procedure that can be used to robustly match points under a certain probabilistic setting. We demonstrate the performance of the proposed methods using simulations and real data applications to complement the theoretical findings. As a result, we contribute to the literature by providing theoretical underpinnings of the matching procedures based on distance invariants like distance profiles, which have been widely used in practice but rarely analyzed theoretically.
YoonHaeng Hur, Yuehaw Khoo
J. Mach. Learn. Res.2
2024 S-SOS: Stochastic Sum-Of-Squares for Parametric Polynomial Optimization
abstract
Global polynomial optimization is an important tool across applied mathematics, with many applications in operations research, engineering, and the physical sciences. In various settings, the polynomials depend on external parameters that may be random. We discuss a stochastic sum-of-squares (S-SOS) algorithm based on the sum-of-squares hierarchy that constructs a series of semidefinite programs to jointly find strict lower bounds on the global minimum and extracts candidates for parameterized global minimizers. We prove quantitative convergence of the hierarchy as the degree increases and use it to solve unconstrained and constrained polynomial optimization problems parameterized by random variables. By employing n-body priors from condensed matter physics to induce sparsity, we can use S-SOS to produce solutions and uncertainty intervals for sensor network localization problems containing up to 40 variables and semidefinite matrix sizes surpassing 800 x 800.
Licheng Zhu, Mathias Oster, Yuehaw Khoo
NeurIPS3
2022 NMR assignment through linear programming
José F. S. Bravo Ferreira, David Cowburn, Yuehaw Khoo, Amit Singer
J. Glob. Optim.3
2016 Variable splitting techniques for discrete tomography
abstract
Discrete tomography problems require the generation of an underlying attenuation field over a combinatorial set that renders the direct application of conventional tomographic reconstruction techniques obsolete. In this work, we propose a solution approach based on a new variable splitting coupled with the alternating direction method of multipliers (ADMM). The new approach creates subproblems that can be solved using existing and fast techniques, such as graph-cut methods, and results in overall solutions of excellent quality. In particular, compared to state-of-the art techniques, we obtain reliable representations of the underlying fields with substantially lower angular coverage. We develop the method under both Gaussian and Poisson noise models and show results with both binary and multilabel phantoms.
Ahmet Tuysuzoglu, Yuehaw Khoo, W. Clem Karl
ICIP2
2016 Non-Iterative Rigid 2D/3D Point-Set Registration Using Semidefinite Programming
abstract
We describe a convex programming framework for pose estimation in 2D/3D point-set registration with unknown point correspondences. We give two mixed-integer nonlinear program (MINLP) formulations of the 2D/3D registration problem when there are multiple 2D images, and propose convex relaxations for both the MINLPs to semidefinite programs that can be solved efficiently by interior point methods. Our approach to the 2D/3D registration problem is non-iterative in nature as we jointly solve for pose and correspondence. Furthermore, these convex programs can readily incorporate feature descriptors of points to enhance registration results. We prove that the convex programs exactly recover the solution to the MINLPs under certain noiseless condition. We apply these formulations to the registration of 3D models of coronary vessels to their 2D projections obtained from multiple intra-operative fluoroscopic images. For this application, we experimentally corroborate the exact recovery property in the absence of noise and further demonstrate robustness of the convex programs in the presence of noise.
Yuehaw Khoo, Ankur Kapoor
IEEE Trans. Image Process.1
2015 Large-scale sensor network localization via rigid subnetwork registration
abstract
In this paper, we describe an algorithm for sensor network localization (SNL) that proceeds by dividing the whole network into smaller subnetworks, then localizes them in parallel using some fast and accurate algorithm, and finally registers the localized subnetworks in a global coordinate system. We demonstrate that this divide-and-conquer algorithm can be used to leverage existing high-precision SNL algorithms to large-scale networks, which could otherwise only be applied to small-to-medium sized networks. The main contribution of this paper concerns the final registration phase. In particular, we consider a least-squares formulation of the registration problem (both with and without anchor constraints) and demonstrate how this otherwise non-convex problem can be relaxed into a tractable convex program. We provide some preliminary simulation results for large-scale SNL demonstrating that the proposed registration algorithm (together with an accurate localization scheme) offers a good tradeoff between run time and accuracy.
Kunal N. Chaudhury, Yuehaw Khoo, Amit Singer
ICASSP2
2014 Open Problem: Tightness of maximum likelihood semidefinite relaxations
abstract
We have observed an interesting, yet unexplained, phenomenon: Semidefinite programming (SDP) based relaxations of maximum likelihood estimators (MLE) tend to be tight in recovery problems with noisy data, even when MLE cannot exactly recover the ground truth. Several results establish tightness of SDP based relaxations in the regime where exact recovery from MLE is possible. However, to the best of our knowledge, their tightness is not understood beyond this regime. As an illustrative example, we focus on the generalized Procrustes problem.
Afonso S. Bandeira, Yuehaw Khoo, Amit Singer
COLT2