George Tucker

dblp:135/5748 · DBLP profile ↗
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32ranked-venue papers
5as first author
11since 2021 · last 2025
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 29 · 4 first-author · 11 since 2021Graphics, computer vision, multimedia, augmented reality and games · 3 · 1 first-authorSystems, architecture and hardware · 1 · 1 since 2021Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author
YearPublicationVenuePosition
2025 Training Language Models to Self-Correct via Reinforcement Learning
abstract
Self-correction is a highly desirable capability of large language models (LLMs), yet it has consistently been found to be largely ineffective in modern LLMs. Current methods for training self-correction typically depend on either multiple models, a more advanced model, or additional forms of supervision. To address these shortcomings, we develop a multi-turn online reinforcement learning (RL) approach, SCoRe, that significantly improves an LLM's self-correction ability using entirely self-generated data. To build SCoRe, we first show that variants of supervised fine-tuning (SFT) on offline model-generated correction traces are insufficient for instilling self-correction behavior. In particular, we observe that training via SFT either suffers from a distribution mismatch between the training data and the model's own responses or implicitly prefers only a certain mode of correction behavior that is often not effective at test time. SCoRe addresses these challenges by training under the model's own distribution of self-generated correction traces and using appropriate regularization to steer the learning process into learning a self-correction strategy that is effective at test time as opposed to simply fitting high-reward responses for a given prompt. This regularization prescribes running a first phase of RL on a base model to generate a policy initialization that is less susceptible to collapse and then using a reward bonus to amplify self-correction during training. When applied to Gemini 1.0 Pro and 1.5 Flash models, we find that SCoRe achieves state-of-the-art self-correction performance, improving the base models' self-correction by 15.6% and 9.1% respectively on the MATH and HumanEval benchmarks.
Aviral Kumar, Vincent Zhuang, Rishabh Agarwal, John D. Co-Reyes, Avi Singh, Kate Baumli, Shariq Iqbal, Colton Bishop, Rebecca Roelofs, Lei M. Zhang, Kay McKinney, Disha Shrivastava, Cosmin Paduraru, George Tucker, Doina Precup, Feryal M. P. Behbahani, Aleksandra Faust
ICLR15
2023 Offline Q-learning on Diverse Multi-Task Data Both Scales And Generalizes
Aviral Kumar, Rishabh Agarwal, Xinyang Geng, George Tucker, Sergey Levine
ICLR4
2023 Imitation Is Not Enough: Robustifying Imitation with Reinforcement Learning for Challenging Driving Scenarios
abstract
Imitation learning (IL) is a simple and powerful way to use high-quality human driving data, which can be collected at scale, to produce human-like behavior. However, policies based on imitation learning alone often fail to sufficiently account for safety and reliability concerns. In this paper, we show how imitation learning combined with reinforcement learning using simple rewards can substan-tially improve the safety and reliability of driving policies over those learned from imitation alone. In particular, we train a policy on over lOOk miles of urban driving data, and measure its effectiveness in test scenarios grouped by different levels of collision likelihood. Our analysis shows that while imitation can perform well in low-difficulty scenarios that are well-covered by the demonstration data, our proposed approach significantly improves robustness on the most challenging scenarios (over 38 % reduction in failures). To our knowledge, this is the first application of a combined imitation and reinforcement learning approach in autonomous driving that utilizes large amounts of real- world human driving data.
Yiren Lu 0001, Justin Fu, George Tucker, Xinlei Pan, Eli Bronstein, Rebecca Roelofs, Benjamin Sapp, Brandyn White, Aleksandra Faust, Shimon Whiteson, Dragomir Anguelov, Sergey Levine
IROS3
2023 Waymax: An Accelerated, Data-Driven Simulator for Large-Scale Autonomous Driving Research
abstract
Simulation is an essential tool to develop and benchmark autonomous vehicle planning software in a safe and cost-effective manner. However, realistic simulation requires accurate modeling of multi-agent interactive behaviors to be trustworthy, behaviors which can be highly nuanced and complex. To address these challenges, we introduce Waymax, a new data-driven simulator for autonomous driving in multi-agent scenes, designed for large-scale simulation and testing. Waymax uses publicly-released, real-world driving data (e.g., the Waymo Open Motion Dataset) to initialize or play back a diverse set of multi-agent simulated scenarios. It runs entirely on hardware accelerators such as TPUs/GPUs and supports in-graph simulation for training, making it suitable for modern large-scale, distributed machine learning workflows. To support online training and evaluation, Waymax includes several learned and hard-coded behavior models that allow for realistic interaction within simulation. To supplement Waymax, we benchmark a suite of popular imitation and reinforcement learning algorithms with ablation studies on different design decisions, where we highlight the effectiveness of routes as guidance for planning agents and the ability of RL to overfit against simulated agents.
Cole Gulino, Justin Fu, George Tucker, Eli Bronstein, Yiren Lu 0001, Jean Harb, Xinlei Pan, Yan Wang 0051, Xiangyu Chen 0007, John D. Co-Reyes, Rishabh Agarwal, Rebecca Roelofs, Yao Lu 0006, Nico Montali, Paul Mougin, Zoey Yang, Brandyn White, Aleksandra Faust, Rowan McAllister, Dragomir Anguelov, Benjamin Sapp
NeurIPS4
2022 Offline Policy Selection under Uncertainty
abstract
The presence of uncertainty in policy evaluation significantly complicates the process of policy ranking and selection in real-world settings. We formally consider offline policy selection as learning preferences over a set of policy prospects given a fixed experience dataset. While one can select or rank policies based on point estimates of their expected values or high-confidence intervals, access to the full distribution over one’s belief of the policy value enables more flexible selection algorithms under a wider range of downstream evaluation metrics. We propose a Bayesian approach for estimating this belief distribution in terms of posteriors of distribution correction ratios derived from stochastic constraints. Empirically, despite being Bayesian, the credible intervals obtained are competitive with state-of-the-art frequentist approaches in confidence interval estimation. More importantly, we show how the belief distribution may be used to rank policies with respect to arbitrary downstream policy selection metrics, and empirically demonstrate that this selection procedure significantly outperforms existing approaches, such as ranking policies according to mean or high-confidence lower bound value estimates.
Sherry Yang 0001, Bo Dai 0001, Ofir Nachum, George Tucker, Dale Schuurmans
AISTATS4
2022 DR3: Value-Based Deep Reinforcement Learning Requires Explicit Regularization
Aviral Kumar, Rishabh Agarwal, Tengyu Ma 0001, Aaron C. Courville, George Tucker, Sergey Levine
ICLR5
2022 Model Selection in Batch Policy Optimization
abstract
We study the problem of model selection in batch policy optimization: given a fixed, partial-feedback dataset and M model classes, learn a policy with performance that is competitive with the policy derived from the best model class. We formalize the problem in the contextual bandit setting with linear model classes by identifying three sources of error that any model selection algorithm should optimally trade-off in order to be competitive: (1) approximation error, (2) statistical complexity, and (3) coverage. The first two sources are common in model selection for supervised learning, where optimally trading off these two is well-studied. In contrast, the third source is unique to batch policy optimization and is due to dataset shift inherent to the setting. We first show that no batch policy optimization algorithm can achieve a guarantee addressing all three simultaneously, revealing a stark contrast between difficulties in batch policy optimization and the positive results available in supervised learning. Despite this negative result, we show that relaxing any one of the three error sources enables the design of algorithms achieving near-oracle inequalities for the remaining two. We conclude with experiments demonstrating the efficacy of these algorithms.
Jonathan Lee 0002, George Tucker, Ofir Nachum, Bo Dai 0001
ICML2
2022 Oracle Inequalities for Model Selection in Offline Reinforcement Learning
abstract
In offline reinforcement learning (RL), a learner leverages prior logged data to learn a good policy without interacting with the environment. A major challenge in applying such methods in practice is the lack of both theoretically principled and practical tools for model selection and evaluation. To address this, we study the problem of model selection in offline RL with value function approximation. The learner is given a nested sequence of model classes to minimize squared Bellman error and must select among these to achieve a balance between approximation and estimation error of the classes. We propose the first model selection algorithm for offline RL that achieves minimax rate-optimal oracle inequalities up to logarithmic factors. The algorithm, ModBE, takes as input a collection of candidate model classes and a generic base offline RL algorithm. By successively eliminating model classes using a novel one-sided generalization test, ModBE returns a policy with regret scaling with the complexity of the minimally complete model class. In addition to its theoretical guarantees, it is conceptually simple and computationally efficient, amounting to solving a series of square loss regression problems and then comparing relative square loss between classes. We conclude with several numerical simulations showing it is capable of reliably selecting a good model class.
Jonathan Lee 0002, George Tucker, Ofir Nachum, Bo Dai 0001, Emma Brunskill
NeurIPS2
2021 Benchmarks for Deep Off-Policy Evaluation
Justin Fu, Mohammad Norouzi 0002, Ofir Nachum, George Tucker, Ziyu Wang 0001, Alexander Novikov 0001, Sherry Yang 0001, Michael R. Zhang, Yutian Chen 0001, Aviral Kumar, Cosmin Paduraru, Sergey Levine, Tom Le Paine
ICLR4
2021 Autoregressive Dynamics Models for Offline Policy Evaluation and Optimization
Michael R. Zhang, Thomas Paine, Ofir Nachum, Cosmin Paduraru, George Tucker, Ziyu Wang 0001, Mohammad Norouzi 0002
ICLR5
2021 Coupled Gradient Estimators for Discrete Latent Variables
abstract
Training models with discrete latent variables is challenging due to the high variance of unbiased gradient estimators. While low-variance reparameterization gradients of a continuous relaxation can provide an effective solution, a continuous relaxation is not always available or tractable. Dong et al. (2020) and Yin et al. (2020) introduced a performant estimator that does not rely on continuous relaxations; however, it is limited to binary random variables. We introduce a novel derivation of their estimator based on importance sampling and statistical couplings, which we extend to the categorical setting. Motivated by the construction of a stick-breaking coupling, we introduce gradient estimators based on reparameterizing categorical variables as sequences of binary variables and Rao-Blackwellization. In systematic experiments, we show that our proposed categorical gradient estimators provide state-of-the-art performance, whereas even with additional Rao-Blackwellization previous estimators (Yin et al., 2019) underperform a simpler REINFORCE with a leave-one-out-baseline estimator (Kool et al., 2019).
Andriy Mnih, George Tucker
NeurIPS3
2020 Model Based Reinforcement Learning for Atari
Lukasz Kaiser, Mohammad Babaeizadeh, Piotr Milos, Blazej Osinski, Roy H. Campbell, Konrad Czechowski, Dumitru Erhan, Chelsea Finn, Piotr Kozakowski, Sergey Levine, Afroz Mohiuddin, Ryan Sepassi, George Tucker, Henryk Michalewski
ICLR13
2020 Meta-Learning without Memorization
Mingzhang Yin, George Tucker, Mingyuan Zhou, Sergey Levine, Chelsea Finn
ICLR2
2020 DisARM: An Antithetic Gradient Estimator for Binary Latent Variables
abstract
Training models with discrete latent variables is challenging due to the difficulty of estimating the gradients accurately. Much of the recent progress has been achieved by taking advantage of continuous relaxations of the system, which are not always available or even possible. The Augment-REINFORCE-Merge (ARM) estimator provides an alternative that, instead of relaxation, uses continuous augmentation. Applying antithetic sampling over the augmenting variables yields a relatively low-variance and unbiased estimator applicable to any model with binary latent variables. However, while antithetic sampling reduces variance, the augmentation process increases variance. We show that ARM can be improved by analytically integrating out the randomness introduced by the augmentation process, guaranteeing substantial variance reduction. Our estimator, DisARM, is simple to implement and has the same computational cost as ARM. We evaluate DisARM on several generative modeling benchmarks and show that it consistently outperforms ARM and a strong independent sample baseline in terms of both variance and log-likelihood. Furthermore, we propose a local version of DisARM designed for optimizing the multi-sample variational bound, and show that it outperforms VIMCO, the current state-of-the-art method.
Andriy Mnih, George Tucker
NeurIPS3
2020 Conservative Q-Learning for Offline Reinforcement Learning
abstract
Effectively leveraging large, previously collected datasets in reinforcement learn- ing (RL) is a key challenge for large-scale real-world applications. Offline RL algorithms promise to learn effective policies from previously-collected, static datasets without further interaction. However, in practice, offline RL presents a major challenge, and standard off-policy RL methods can fail due to overestimation of values induced by the distributional shift between the dataset and the learned policy, especially when training on complex and multi-modal data distributions. In this paper, we propose conservative Q-learning (CQL), which aims to address these limitations by learning a conservative Q-function such that the expected value of a policy under this Q-function lower-bounds its true value. We theoretically show that CQL produces a lower bound on the value of the current policy and that it can be incorporated into a policy learning procedure with theoretical improvement guarantees. In practice, CQL augments the standard Bellman error objective with a simple Q-value regularizer which is straightforward to implement on top of existing deep Q-learning and actor-critic implementations. On both discrete and continuous control domains, we show that CQL substantially outperforms existing offline RL methods, often learning policies that attain 2-5 times higher final return, especially when learning from complex and multi-modal data distributions.
Aviral Kumar, Aurick Zhou, George Tucker, Sergey Levine
NeurIPS3
2019 Doubly Reparameterized Gradient Estimators for Monte Carlo Objectives
George Tucker, Dieterich Lawson, Shixiang Gu, Chris J. Maddison
ICLR (Poster)1
2019 The Laplacian in RL: Learning Representations with Efficient Approximations
George Tucker, Ofir Nachum
ICLR (Poster)2
2019 Guided evolutionary strategies: augmenting random search with surrogate gradients
abstract
Many applications in machine learning require optimizing a function whose true gradient is unknown or computationally expensive, but where surrogate gradient information, directions that may be correlated with the true gradient, is cheaply available. For example, this occurs when an approximate gradient is easier to compute than the full gradient (e.g. in meta-learning or unrolled optimization), or when a true gradient is intractable and is replaced with a surrogate (e.g. in reinforcement learning or training networks with discrete variables). We propose Guided Evolutionary Strategies (GES), a method for optimally using surrogate gradient directions to accelerate random search. GES defines a search distribution for evolutionary strategies that is elongated along a subspace spanned by the surrogate gradients and estimates a descent direction which can then be passed to a first-order optimizer. We analytically and numerically characterize the tradeoffs that result from tuning how strongly the search distribution is stretched along the guiding subspace and use this to derive a setting of the hyperparameters that works well across problems. We evaluate GES on several example problems, demonstrating an improvement over both standard evolutionary strategies and first-order methods that directly follow the surrogate gradient.
Niru Maheswaranathan, Luke Metz, George Tucker, Dami Choi, Jascha Sohl-Dickstein
ICML3
2019 On Variational Bounds of Mutual Information
abstract
Estimating and optimizing Mutual Information (MI) is core to many problems in machine learning, but bounding MI in high dimensions is challenging. To establish tractable and scalable objectives, recent work has turned to variational bounds parameterized by neural networks. However, the relationships and tradeoffs between these bounds remains unclear. In this work, we unify these recent developments in a single framework. We find that the existing variational lower bounds degrade when the MI is large, exhibiting either high bias or high variance. To address this problem, we introduce a continuum of lower bounds that encompasses previous bounds and flexibly trades off bias and variance. On high-dimensional, controlled problems, we empirically characterize the bias and variance of the bounds and their gradients and demonstrate the effectiveness of these new bounds for estimation and representation learning.
Ben Poole, Sherjil Ozair, Aäron van den Oord, Alexander A. Alemi, George Tucker
ICML5
2019 Stabilizing Off-Policy Q-Learning via Bootstrapping Error Reduction
abstract
Off-policy reinforcement learning aims to leverage experience collected from prior policies for sample-efficient learning. However, in practice, commonly used off-policy approximate dynamic programming methods based on Q-learning and actor-critic methods are highly sensitive to the data distribution, and can make only limited progress without collecting additional on-policy data. As a step towards more robust off-policy algorithms, we study the setting where the off-policy experience is fixed and there is no further interaction with the environment. We identify \emph{bootstrapping error} as a key source of instability in current methods. Bootstrapping error is due to bootstrapping from actions that lie outside of the training data distribution, and it accumulates via the Bellman backup operator. We theoretically analyze bootstrapping error, and demonstrate how carefully constraining action selection in the backup can mitigate it. Based on our analysis, we propose a practical algorithm, bootstrapping error accumulation reduction (BEAR). We demonstrate that BEAR is able to learn robustly from different off-policy distributions, including random data and suboptimal demonstrations, on a range of continuous control tasks.
Aviral Kumar, Justin Fu, Matthew Soh, George Tucker, Sergey Levine
NeurIPS4
2019 Energy-Inspired Models: Learning with Sampler-Induced Distributions
abstract
Energy-based models (EBMs) are powerful probabilistic models, but suffer from intractable sampling and density evaluation due to the partition function. As a result, inference in EBMs relies on approximate sampling algorithms, leading to a mismatch between the model and inference. Motivated by this, we consider the sampler-induced distribution as the model of interest and maximize the likelihood of this model. This yields a class of energy-inspired models (EIMs) that incorporate learned energy functions while still providing exact samples and tractable log-likelihood lower bounds. We describe and evaluate three instantiations of such models based on truncated rejection sampling, self-normalized importance sampling, and Hamiltonian importance sampling. These models out-perform or perform comparably to the recently proposed Learned Accept/RejectSampling algorithm and provide new insights on ranking Noise Contrastive Estimation and Contrastive Predictive Coding. Moreover, EIMs allow us to generalize a recent connection between multi-sample variational lower bounds and auxiliary variable variational inference. We show how recent variational bounds can be unified with EIMs as the variational family.
Dieterich Lawson, George Tucker, Bo Dai 0001, Rajesh Ranganath
NeurIPS2
2019 Don't Blame the ELBO! A Linear VAE Perspective on Posterior Collapse
abstract
Posterior collapse in Variational Autoencoders (VAEs) with uninformative priors arises when the variational posterior distribution closely matches the prior for a subset of latent variables. This paper presents a simple and intuitive explanation for posterior collapse through the analysis of linear VAEs and their direct correspondence with Probabilistic PCA (pPCA). We explain how posterior collapse may occur in pPCA due to local maxima in the log marginal likelihood. Unexpectedly, we prove that the ELBO objective for the linear VAE does not introduce additional spurious local maxima relative to log marginal likelihood. We show further that training a linear VAE with exact variational inference recovers a uniquely identifiable global maximum corresponding to the principal component directions. Empirically, we find that our linear analysis is predictive even for high-capacity, non-linear VAEs and helps explain the relationship between the observation noise, local maxima, and posterior collapse in deep Gaussian VAEs.
James Lucas, George Tucker, Roger B. Grosse, Mohammad Norouzi 0002
NeurIPS2
2018 Learning Hard Alignments with Variational Inference
abstract
There has recently been significant interest in hard attention models for tasks such as object recognition, visual captioning and speech recognition. Hard attention offers benefits over soft attention such as decreased computational cost, but training hard attention models can be difficult because of the discrete latent variables they introduce. Previous work used REINFORCE to approach these issues, however, it suffers from high-variance gradient estimates, resulting in slow convergence. In this paper, we tackle the problem of learning hard attention for a sequential task using variational inference methods, specifically the recently introduced Variational Inference for Monte Carlo Objectives (VIMCO) and Neural Variational Inference (NVIL). Furthermore, we propose a novel baseline that adapts VIMCO to this setting. We demonstrate our method on a phoneme recognition task in clean and noisy environments and show that our method outperforms REINFORCE, with the difference being greater for a more complicated task.
Dieterich Lawson, Chung-Cheng Chiu, George Tucker, Colin Raffel, Kevin Swersky, Navdeep Jaitly
ICASSP3
2018 Deep Bayesian Bandits Showdown: An Empirical Comparison of Bayesian Deep Networks for Thompson Sampling
Carlos Riquelme, George Tucker, Jasper Snoek
ICLR (Poster)2
2018 Smoothed Action Value Functions for Learning Gaussian Policies
abstract
State-action value functions (i.e., Q-values) are ubiquitous in reinforcement learning (RL), giving rise to popular algorithms such as SARSA and Q-learning. We propose a new notion of action value defined by a Gaussian smoothed version of the expected Q-value. We show that such smoothed Q-values still satisfy a Bellman equation, making them learnable from experience sampled from an environment. Moreover, the gradients of expected reward with respect to the mean and covariance of a parameterized Gaussian policy can be recovered from the gradient and Hessian of the smoothed Q-value function. Based on these relationships we develop new algorithms for training a Gaussian policy directly from a learned smoothed Q-value approximator. The approach is additionally amenable to proximal optimization by augmenting the objective with a penalty on KL-divergence from a previous policy. We find that the ability to learn both a mean and covariance during training leads to significantly improved results on standard continuous control benchmarks.
Ofir Nachum, Mohammad Norouzi 0002, George Tucker, Dale Schuurmans
ICML3
2018 The Mirage of Action-Dependent Baselines in Reinforcement Learning
abstract
Policy gradient methods are a widely used class of model-free reinforcement learning algorithms where a state-dependent baseline is used to reduce gradient estimator variance. Several recent papers extend the baseline to depend on both the state and action and suggest that this significantly reduces variance and improves sample efficiency without introducing bias into the gradient estimates. To better understand this development, we decompose the variance of the policy gradient estimator and numerically show that learned state-action-dependent baselines do not in fact reduce variance over a state-dependent baseline in commonly tested benchmark domains. We confirm this unexpected result by reviewing the open-source code accompanying these prior papers, and show that subtle implementation decisions cause deviations from the methods presented in the papers and explain the source of the previously observed empirical gains. Furthermore, the variance decomposition highlights areas for improvement, which we demonstrate by illustrating a simple change to the typical value function parameterization that can significantly improve performance.
George Tucker, Surya Bhupatiraju, Shixiang Gu, Richard E. Turner, Zoubin Ghahramani, Sergey Levine
ICML1
2018 Sample-Efficient Reinforcement Learning with Stochastic Ensemble Value Expansion
abstract
There is growing interest in combining model-free and model-based approaches in reinforcement learning with the goal of achieving the high performance of model-free algorithms with low sample complexity. This is difficult because an imperfect dynamics model can degrade the performance of the learning algorithm, and in sufficiently complex environments, the dynamics model will always be imperfect. As a result, a key challenge is to combine model-based approaches with model-free learning in such a way that errors in the model do not degrade performance. We propose stochastic ensemble value expansion (STEVE), a novel model-based technique that addresses this issue. By dynamically interpolating between model rollouts of various horizon lengths, STEVE ensures that the model is only utilized when doing so does not introduce significant errors. Our approach outperforms model-free baselines on challenging continuous control benchmarks with an order-of-magnitude increase in sample efficiency.
Jacob Buckman, Danijar Hafner, George Tucker, Eugene Brevdo, Honglak Lee
NeurIPS3
2017 Filtering Variational Objectives
abstract
When used as a surrogate objective for maximum likelihood estimation in latent variable models, the evidence lower bound (ELBO) produces state-of-the-art results. Inspired by this, we consider the extension of the ELBO to a family of lower bounds defined by a particle filter's estimator of the marginal likelihood, the filtering variational objectives (FIVOs). FIVOs take the same arguments as the ELBO, but can exploit a model's sequential structure to form tighter bounds. We present results that relate the tightness of FIVO's bound to the variance of the particle filter's estimator by considering the generic case of bounds defined as log-transformed likelihood estimators. Experimentally, we show that training with FIVO results in substantial improvements over training the same model architecture with the ELBO on sequential data.
Chris J. Maddison, Dieterich Lawson, George Tucker, Nicolas Heess, Mohammad Norouzi 0002, Andriy Mnih, Arnaud Doucet, Yee Whye Teh
NIPS3
2017 REBAR: Low-variance, unbiased gradient estimates for discrete latent variable models
abstract
Learning in models with discrete latent variables is challenging due to high variance gradient estimators. Generally, approaches have relied on control variates to reduce the variance of the REINFORCE estimator. Recent work \citep{jang2016categorical, maddison2016concrete} has taken a different approach, introducing a continuous relaxation of discrete variables to produce low-variance, but biased, gradient estimates. In this work, we combine the two approaches through a novel control variate that produces low-variance, \emph{unbiased} gradient estimates. Then, we introduce a modification to the continuous relaxation and show that the tightness of the relaxation can be adapted online, removing it as a hyperparameter. We show state-of-the-art variance reduction on several benchmark generative modeling tasks, generally leading to faster convergence to a better final log-likelihood.
George Tucker, Andriy Mnih, Chris J. Maddison, Dieterich Lawson, Jascha Sohl-Dickstein
NIPS1
2016 Model Compression Applied to Small-Footprint Keyword Spotting
George Tucker, Minhua Wu, Ming Sun 0007, Sankaran Panchapagesan, Gengshen Fu, Shiv Vitaladevuni
INTERSPEECH1
2016 Max-pooling loss training of long short-term memory networks for small-footprint keyword spotting
abstract
We propose a max-pooling based loss function for training Long Short-Term Memory (LSTM) networks for small-footprint keyword spotting (KWS), with low CPU, memory, and latency requirements. The max-pooling loss training can be further guided by initializing with a cross-entropy loss trained network. A posterior smoothing based evaluation approach is employed to measure keyword spotting performance. Our experimental results show that LSTM models trained using cross-entropy loss or max-pooling loss outperform a cross-entropy loss trained baseline feed-forward Deep Neural Network (DNN). In addition, max-pooling loss trained LSTM with randomly initialized network performs better compared to cross-entropy loss trained LSTM. Finally, the max-pooling loss trained LSTM initialized with a cross-entropy pre-trained network shows the best performance, which yields 67:6% relative reduction compared to baseline feed-forward DNN in Area Under the Curve (AUC) measure.
Ming Sun 0007, Anirudh Raju, George Tucker, Sankaran Panchapagesan, Gengshen Fu, Arindam Mandal, Spyridon Matsoukas, Nikko Strom, Shiv Vitaladevuni
SLT3
2013 A sampling framework for incorporating quantitative mass spectrometry data in protein interaction analysis
abstract
BACKGROUND: Comprehensive protein-protein interaction (PPI) maps are a powerful resource for uncovering the molecular basis of genetic interactions and providing mechanistic insights. Over the past decade, high-throughput experimental techniques have been developed to generate PPI maps at proteome scale, first using yeast two-hybrid approaches and more recently via affinity purification combined with mass spectrometry (AP-MS). Unfortunately, data from both protocols are prone to both high false positive and false negative rates. To address these issues, many methods have been developed to post-process raw PPI data. However, with few exceptions, these methods only analyze binary experimental data (in which each potential interaction tested is deemed either observed or unobserved), neglecting quantitative information available from AP-MS such as spectral counts. RESULTS: We propose a novel method for incorporating quantitative information from AP-MS data into existing PPI inference methods that analyze binary interaction data. Our approach introduces a probabilistic framework that models the statistical noise inherent in observations of co-purifications. Using a sampling-based approach, we model the uncertainty of interactions with low spectral counts by generating an ensemble of possible alternative experimental outcomes. We then apply the existing method of choice to each alternative outcome and aggregate results over the ensemble. We validate our approach on three recent AP-MS data sets and demonstrate performance comparable to or better than state-of-the-art methods. Additionally, we provide an in-depth discussion comparing the theoretical bases of existing approaches and identify common aspects that may be key to their performance. CONCLUSIONS: Our sampling framework extends the existing body of work on PPI analysis using binary interaction data to apply to the richer quantitative data now commonly available through AP-MS assays. This framework is quite general, and many enhancements are likely possible. Fruitful future directions may include investigating more sophisticated schemes for converting spectral counts to probabilities and applying the framework to direct protein complex prediction methods.
George Tucker, Po-Ru Loh, Bonnie Berger
BMC Bioinform.1