Yanshuai Tu

dblp:142/3913 · DBLP profile ↗
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7ranked-venue papers
4as first author
5since 2021 · last 2024
0000-0002-4619-2613ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 6 · 4 first-author · 5 since 2021Graphics, computer vision, multimedia, augmented reality and games · 2 · 2 first-author · 1 since 2021Artificial intelligence and machine learning · 1
YearPublicationVenuePosition
2024 Adaptive smoothing of retinotopic maps based on Teichmüller parametrization
Yanshuai Tu, Xin Li 0201, Zhonglin Lu, Yalin Wang 0001
Medical Image Anal.1
2022 Quantitative characterization of the human retinotopic map based on quasiconformal mapping
abstract
The retinotopic map depicts the cortical neurons' response to visual stimuli on the retina and has contributed significantly to our understanding of human visual system. Although recent advances in high field functional magnetic resonance imaging (fMRI) have made it possible to generate the in vivo retinotopic map with great detail, quantifying the map remains challenging. Existing quantification methods do not preserve surface topology and often introduce large geometric distortions to the map. In this study, we developed a new framework based on computational conformal geometry and quasiconformal Teichmüller theory to quantify the retinotopic map. Specifically, we introduced a general pipeline, consisting of cortical surface conformal parameterization, surface-spline-based cortical activation signal smoothing, and vertex-wise Beltrami coefficient-based map description. After correcting most of the violations of the topological conditions, the result was a "Beltrami coefficient map" (BCM) that rigorously and completely characterizes the retinotopic map by quantifying the local quasiconformal mapping distortion at each visual field location. The BCM provided topological and fully reconstructable retinotopic maps. We successfully applied the new framework to analyze the V1 retinotopic maps from the Human Connectome Project (n=181), the largest state of the art retinotopy dataset currently available. With unprecedented precision, we found that the V1 retinotopic map was quasiconformal and the local mapping distortions were similar across observers. The new framework can be applied to other visual areas and retinotopic maps of individuals with and without eye diseases, and improve our understanding of visual cortical organization in normal and clinical populations.
Duyan Ta, Yanshuai Tu, Zhonglin Lu, Yalin Wang 0001
Medical Image Anal.2
2022 Corrigendum to 'Quantitative Characterization of the Human Retinotopic Map Based on Quasiconformal Mapping' [Medical Image Analysis Volume 75 (2022) 102230]
Duyan Ta, Yanshuai Tu, Zhonglin Lu, Yalin Wang 0001
Medical Image Anal.2
2021 Topological Receptive Field Model for Human Retinotopic Mapping
Yanshuai Tu, Duyan Ta, Zhonglin Lu, Yalin Wang 0001
MICCAI (7)1
2021 Topology-preserving smoothing of retinotopic maps
abstract
Retinotopic mapping, i.e., the mapping between visual inputs on the retina and neuronal activations in cortical visual areas, is one of the central topics in visual neuroscience. For human observers, the mapping is obtained by analyzing functional magnetic resonance imaging (fMRI) signals of cortical responses to slowly moving visual stimuli on the retina. Although it is well known from neurophysiology that the mapping is topological (i.e., the topology of neighborhood connectivity is preserved) within each visual area, retinotopic maps derived from the state-of-the-art methods are often not topological because of the low signal-to-noise ratio and spatial resolution of fMRI. The violation of topological condition is most severe in cortical regions corresponding to the neighborhood of the fovea (e.g., < 1 degree eccentricity in the Human Connectome Project (HCP) dataset), significantly impeding accurate analysis of retinotopic maps. This study aims to directly model the topological condition and generate topology-preserving and smooth retinotopic maps. Specifically, we adopted the Beltrami coefficient, a metric of quasiconformal mapping, to define the topological condition, developed a mathematical model to quantify topological smoothing as a constrained optimization problem, and elaborated an efficient numerical method to solve the problem. The method was then applied to V1, V2, and V3 simultaneously in the HCP dataset. Experiments with both simulated and real retinotopy data demonstrated that the proposed method could generate topological and smooth retinotopic maps.
Yanshuai Tu, Duyan Ta, Zhonglin Lu, Yalin Wang 0001
PLoS Comput. Biol.1
2020 Optimizing Visual Cortex Parameterization with Error-Tolerant Teichmüller Map in Retinotopic Mapping
Yanshuai Tu, Duyan Ta, Zhonglin Lu, Yalin Wang 0001
MICCAI (7)1
2014 Controllability of Boolean control networks with time delays both in states and inputs
Yang Liu 0040, Yanshuai Tu
Neurocomputing3