Narrowing the gap between theory and practice is a longstanding goal of the algorithm analysis community. To further progress our understanding of how algorithms work in practice, we propose a new algorithm analysis framework that we call by-the-book analysis. In contrast to earlier frameworks, by-the-book analysis not only models an algorithm's input data, but also the algorithm itself. Results from by-the-book analysis are meant to correspond well with established knowledge of an algorithm's practical behavior, as they are meant to be grounded in observations from implementations, input modeling best practices, and measurements on practical benchmark instances. We apply our framework to the simplex method, an algorithm which is beloved for its excellent performance in practice and notorious for its high running time under worst-case analysis. The simplex method similarly showcased the previous state of the art framework smoothed analysis (Spielman and Teng, STOC'01). We explain how our framework overcomes several weaknesses of smoothed analysis and we prove that under input scaling assumptions, feasibility tolerances and other design principles used by simplex method implementations, the simplex method indeed attains a polynomial running time. Our results provide analytical justification for these features which are common to all high-quality simplex method implementations.

The combinatorial diameter of a polytope $P$ is the maximum value of a shortest path between two vertices of $P$, where the path uses the edges of $P$ only. In contrast to the combinatorial diameter, the circuit diameter of $P$ is defined as the maximum value of a shortest path between two vertices of $P$, where the path uses potential edge directions of $P$, i.e., all edge directions that can arise by translating some of the facets of $P$. In this paper, we study the circuit diameter of polytopes corresponding to classical combinatorial optimization problems, such as the matching polytope, the Traveling Salesman polytope, and the fractional stable set polytope.