Ali Bahrami Rad

dblp:148/9744 · DBLP profile ↗
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7ranked-venue papers
1as first author
5since 2021 · last 2024
0000-0002-5654-4301ORCID · verified

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Applied, interdisciplinary, general and emerging computing · 5 · 5 since 2021Artificial intelligence and machine learning · 1Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 first-author
YearPublicationVenuePosition
2024 Multimodal Mental Health Digital Biomarker Analysis From Remote Interviews Using Facial, Vocal, Linguistic, and Cardiovascular Patterns
abstract
OBJECTIVE: Psychiatric evaluation suffers from subjectivity and bias, and is hard to scale due to intensive professional training requirements. In this work, we investigated whether behavioral and physiological signals, extracted from tele-video interviews, differ in individuals with psychiatric disorders. METHODS: Temporal variations in facial expression, vocal expression, linguistic expression, and cardiovascular modulation were extracted from simultaneously recorded audio and video of remote interviews. Averages, standard deviations, and Markovian process-derived statistics of these features were computed from 73 subjects. Four binary classification tasks were defined: detecting 1) any clinically-diagnosed psychiatric disorder, 2) major depressive disorder, 3) self-rated depression, and 4) self-rated anxiety. Each modality was evaluated individually and in combination. RESULTS: Statistically significant feature differences were found between psychiatric and control subjects. Correlations were found between features and self-rated depression and anxiety scores. Heart rate dynamics provided the best unimodal performance with areas under the receiver-operator curve (AUROCs) of 0.68-0.75 (depending on the classification task). Combining multiple modalities provided AUROCs of 0.72-0.82. CONCLUSION: Multimodal features extracted from remote interviews revealed informative characteristics of clinically diagnosed and self-rated mental health status. SIGNIFICANCE: The proposed multimodal approach has the potential to facilitate scalable, remote, and low-cost assessment for low-burden automated mental health services.
Zifan Jiang, Salman Seyedi, Emily Griner, Ahmed Abbasi, Ali Bahrami Rad, Hyeokhyen Kwon, Robert O. Cotes, Gari D. Clifford
IEEE J. Biomed. Health Informatics5
2024 Off-Body Sleep Analysis for Predicting Adverse Behavior in Individuals With Autism Spectrum Disorder
abstract
Poor sleep quality in Autism Spectrum Disorder (ASD) individuals is linked to severe daytime behaviors. This study explores the relationship between a prior night's sleep structure and its predictive power for next-day behavior in ASD individuals. The motion was extracted using a low-cost near-infrared camera in a privacy-preserving way. Over two years, we recorded overnight data from 14 individuals, spanning over 2000 nights, and tracked challenging daytime behaviors, including aggression, self-injury, and disruption. We developed an ensemble machine learning algorithm to predict next-day behavior in the morning and the afternoon. Our findings indicate that sleep quality is a more reliable predictor of morning behavior than afternoon behavior the next day. The proposed model attained an accuracy of 74% and a F1 score of 0.74in target-sensitive tasks and 67% accuracy and 0.69 F1 score in target-insensitive tasks. For 7 of the 14, better-than-chance balanced accuracy was obtained (p-value 0.05), with 3 showing significant trends (p-value 0.1). These results suggest off-body, privacy-preserving sleep monitoring as a viable method for predicting next-day adverse behavior in ASD individuals, with the potential for behavioral intervention and enhanced care in social and learning settings.
Yashar Kiarashinejad, Pradyumna Suresha, Ali Bahrami Rad, Matthew A. Reyna, Conor Anderson, Jenny Foster, Johanna Lantz, Tania Villavicencio, Theresa Hamlin, Gari D. Clifford
IEEE J. Biomed. Health Informatics3
2023 Beyond Heart Murmur Detection: Automatic Murmur Grading From Phonocardiogram
abstract
OBJECTIVE: Murmurs are abnormal heart sounds, identified by experts through cardiac auscultation. The murmur grade, a quantitative measure of the murmur intensity, is strongly correlated with the patient's clinical condition. This work aims to estimate each patient's murmur grade (i.e., absent, soft, loud) from multiple auscultation location phonocardiograms (PCGs) of a large population of pediatric patients from a low-resource rural area. METHODS: The Mel spectrogram representation of each PCG recording is given to an ensemble of 15 convolutional residual neural networks with channel-wise attention mechanisms to classify each PCG recording. The final murmur grade for each patient is derived based on the proposed decision rule and considering all estimated labels for available recordings. The proposed method is cross-validated on a dataset consisting of 3456 PCG recordings from 1007 patients using a stratified ten-fold cross-validation. Additionally, the method was tested on a hidden test set comprised of 1538 PCG recordings from 442 patients. RESULTS: The overall cross-validation performances for patient-level murmur gradings are 86.3% and 81.6% in terms of the unweighted average of sensitivities and F1-scores, respectively. The sensitivities (and F1-scores) for absent, soft, and loud murmurs are 90.7% (93.6%), 75.8% (66.8%), and 92.3% (84.2%), respectively. On the test set, the algorithm achieves an unweighted average of sensitivities of 80.4% and an F1-score of 75.8%. CONCLUSIONS: This study provides a potential approach for algorithmic pre-screening in low-resource settings with relatively high expert screening costs. SIGNIFICANCE: The proposed method represents a significant step beyond detection of murmurs, providing characterization of intensity, which may provide an enhanced classification of clinical outcomes.
Andoni Elola, Elisabete Aramendi, Jorge Oliveira 0002, Francesco Renna, Miguel Tavares Coimbra, Matthew A. Reyna, Reza Sameni, Gari D. Clifford, Ali Bahrami Rad
IEEE J. Biomed. Health Informatics9
2022 The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
abstract
Cardiac auscultation is one of the most cost-effective techniques used to detect and identify many heart conditions. Computer-assisted decision systems based on auscultation can support physicians in their decisions. Unfortunately, the application of such systems in clinical trials is still minimal since most of them only aim to detect the presence of extra or abnormal waves in the phonocardiogram signal, i.e., only a binary ground truth variable (normal vs abnormal) is provided. This is mainly due to the lack of large publicly available datasets, where a more detailed description of such abnormal waves (e.g., cardiac murmurs) exists. To pave the way to more effective research on healthcare recommendation systems based on auscultation, our team has prepared the currently largest pediatric heart sound dataset. A total of 5282 recordings have been collected from the four main auscultation locations of 1568 patients, in the process, 215780 heart sounds have been manually annotated. Furthermore, and for the first time, each cardiac murmur has been manually annotated by an expert annotator according to its timing, shape, pitch, grading, and quality. In addition, the auscultation locations where the murmur is present were identified as well as the auscultation location where the murmur is detected more intensively. Such detailed description for a relatively large number of heart sounds may pave the way for new machine learning algorithms with a real-world application for the detection and analysis of murmur waves for diagnostic purposes.
Jorge Oliveira 0002, Francesco Renna, Paulo Dias Costa, Diogo Marcelo Nogueira, Cristina Oliveira, Carlos Ferreira 0007, Alípio Mário Jorge, Sandra da Silva Mattos, Thamine Hatem, Thiago Tavares, Andoni Elola, Ali Bahrami Rad, Reza Sameni, Gari D. Clifford, Miguel Tavares Coimbra
IEEE J. Biomed. Health Informatics12
2021 Classification and Prediction of Post-Trauma Outcomes Related to PTSD Using Circadian Rhythm Changes Measured via Wrist-Worn Research Watch in a Large Longitudinal Cohort
abstract
Post-Traumatic Stress Disorder (PTSD) is a psychiatric condition resulting from threatening or horrifying events. We hypothesized that circadian rhythm changes, measured by a wrist-worn research watch are predictive of post-trauma outcomes. APPROACH: 1618 post-trauma patients were enrolled after admission to emergency departments (ED). Three standardized questionnaires were administered at week eight to measure post-trauma outcomes related to PTSD, sleep disturbance, and pain interference with daily life. Pulse activity and movement data were captured from a research watch for eight weeks. Standard and novel movement and cardiovascular metrics that reflect circadian rhythms were derived using this data. These features were used to train different classifiers to predict the three outcomes derived from week-eight surveys. Clinical surveys administered at ED were also used as features in the baseline models. RESULTS: The highest cross-validated performance of research watch-based features was achieved for classifying participants with pain interference by a logistic regression model, with an area under the receiver operating characteristic curve (AUC) of 0.70. The ED survey-based model achieved an AUC of 0.77, and the fusion of research watch and ED survey metrics improved the AUC to 0.79. SIGNIFICANCE: This work represents the first attempt to predict and classify post-trauma symptoms from passive wearable data using machine learning approaches that leverage the circadian desynchrony in a potential PTSD population.
Ayse S. Cakmak, Erick Andres Perez-Alday, Giulia Da Poian, Ali Bahrami Rad, Thomas J. Metzler, Thomas Neylan, Stacey L. House, Francesca L. Beaudoin, Xinming An, Jennifer S. Stevens, Donglin Zeng, Sarah D. Linnstaedt, Tanja Jovanovic, Laura T. Germine, Kenneth A. Bollen, Scott L. Rauch, Christopher A. Lewandowski, Phyllis L. Hendry, Sophia Sheikh, Alan B. Storrow, Paul I. Musey, John P. Haran, Christopher W. Jones, Brittany E. Punches, Robert A. Swor, Nina T. Gentile, Meghan McGrath, Mark J. Seamon, Kamran Mohiuddin, Anna M. Chang, Claire Pearson, Robert M. Domeier, Steven E. Bruce, Brian J. O'Neil, Niels K. Rathlev, Leon D. Sanchez, Robert H. Pietrzak, Jutta Joormann, Deanna M. Barch, Diego A. Pizzagalli, Steven E. Harte, James M. Elliott, Ronald C. Kessler, Karestan C. Koenen, Kerry J. Ressler, Samuel A. McLean, Qiao Li 0011, Gari D. Clifford
IEEE J. Biomed. Health Informatics4
2020 Real-time phonocardiogram anomaly detection by adaptive 1D Convolutional Neural Networks
abstract
The heart sound signals (Phonocardiogram – PCG) enable the earliest monitoring to detect a potential cardiovascular pathology and have recently become a crucial tool as a diagnostic test in outpatient monitoring to assess heart hemodynamic status. The need for an automated and accurate anomaly detection method for PCG has thus become imminent. To determine the state-of-the-art PCG classification algorithm, 48 international teams competed in the PhysioNet (CinC) Challenge in 2016 over the largest benchmark dataset with 3126 records with the classification outputs, normal (N), abnormal (A) and unsure – too noisy (U). In this study, our aim is to push this frontier further; however, we focus deliberately on the anomaly detection problem while assuming a reasonably high Signal-to-Noise Ratio (SNR) on the records. By using 1D Convolutional Neural Networks trained with a novel data purification approach, we aim to achieve the highest detection performance and real-time processing ability with significantly lower delay and computational complexity. The experimental results over the high-quality subset of the same benchmark dataset show that the proposed approach achieves both objectives. Furthermore, our findings reveal the fact that further improvements indeed require a personalized (patient-specific) approach to avoid major drawbacks of a global PCG classification approach.
Serkan Kiranyaz, Morteza Zabihi, Ali Bahrami Rad, Turker Ince, Ridha Hamila, Moncef Gabbouj
Neurocomputing3
2014 Nearest-manifold classification approach for cardiac arrest rhythm interpretation during resuscitation
abstract
In order to monitor the cardiac arrest patients response to therapy, there is a need for methods that can reliably interpret the different types of cardiac rhythms that can occur during a resuscitation episode. These rhythms can be categorized to five groups; ventricular tachycardia, ventricular fibrillation, pulseless electrical activity, asystole, and pulse generating rhythm. The objective of this study was to develop machine learning algorithms to automatically recognize these rhythms. We proposed a detection algorithm based on the nearest-manifold classification approach using a group of 8 time-domain features as statistical measures on the signal itself, as well as the first and second differences. The overall accuracy of the cardiac arrest rhythm interpretation is 79% which is 9% better than our prior work. The sensitivity/specificity of shockable/non-shockable rhythms is 92/95%.
Ali Bahrami Rad, Trygve Eftestøl, Jan Terje Kvaløy, Unai Ayala, Jo Kramer-Johansen, Kjersti Engan
ICASSP1