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Giacomo Bassetto

dblp:155/1936 · DBLP profile ↗
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2ranked-venue papers
0as first author
0since 2021 · last 2017
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 2

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
2 papers
Probabilistic and Bayesian machine learning · 72% Knowledge representation and reasoning · 28%
Interdisciplinary, comprehensive, and emerging computing
2 papers
Bioinformatics and computational biology · 100%

Topics — the 4 heaviest of 5, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Probabilistic and Bayesian machine learning › statistical inference › bayesian inference › approximate bayesian inference
approximate bayesian computation
0.312017
Flexible statistical inference for mechanistic models of neural dynamics · NIPS 2017
Bioinformatics and computational biology
computational neuroscience
0.312017
Flexible statistical inference for mechanistic models of neural dynamics · NIPS 2017
Machine learning › Probabilistic and Bayesian machine learning › structured models › latent variable model
bayesian latent variable model
0.212014
A Bayesian model for identifying hierarchically organised states in neural population activity · NIPS 2014
Bioinformatics and computational biology › computational neuroscience
neural population analysis
0.112014
A Bayesian model for identifying hierarchically organised states in neural population activity · NIPS 2014

Methods — techniques the papers use, named apart from their topics

recurrent neural network · 0.6bayesian mixture-density network · 0.6adaptive simulation · 0.6hierarchical model · 0.4bayesian inference · 0.4
YearPublicationVenuePosition
2017 Flexible statistical inference for mechanistic models of neural dynamics
abstract
Mechanistic models of single-neuron dynamics have been extensively studied in computational neuroscience. However, identifying which models can quantitatively reproduce empirically measured data has been challenging. We propose to overcome this limitation by using likelihood-free inference approaches (also known as Approximate Bayesian Computation, ABC) to perform full Bayesian inference on single-neuron models. Our approach builds on recent advances in ABC by learning a neural network which maps features of the observed data to the posterior distribution over parameters. We learn a Bayesian mixture-density network approximating the posterior over multiple rounds of adaptively chosen simulations. Furthermore, we propose an efficient approach for handling missing features and parameter settings for which the simulator fails, as well as a strategy for automatically learning relevant features using recurrent neural networks. On synthetic data, our approach efficiently estimates posterior distributions and recovers ground-truth parameters. On in-vitro recordings of membrane voltages, we recover multivariate posteriors over biophysical parameters, which yield model-predicted voltage traces that accurately match empirical data. Our approach will enable neuroscientists to perform Bayesian inference on complex neuron models without having to design model-specific algorithms, closing the gap between mechanistic and statistical approaches to single-neuron modelling.
Jan-Matthis Lueckmann, Pedro J. Gonçalves, Giacomo Bassetto, Kaan Öcal, Marcel Nonnenmacher, Jakob H. Macke
NIPS3
2014 A Bayesian model for identifying hierarchically organised states in neural population activity
Patrick Putzky, Florian Franzen, Giacomo Bassetto, Jakob H. Macke
NIPS3