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Panagiotis Ioannidis 0001

dblp:157/3972-1 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2015
0000-0003-0939-6745ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › sequence analysis › sequence assembly › genome assembly
assembly quality assessment		 0.212015
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs · Bioinform. 2015
Bioinformatics and computational biology
genome annotation		 0.212015
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs · Bioinform. 2015
Bioinformatics and computational biology › sequence analysis › sequence assembly
genome assembly		 0.212015
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs · Bioinform. 2015

Methods — techniques the papers use, named apart from their topics

single-copy ortholog analysis · 0.2
YearPublicationVenuePosition
2015 BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
abstract
MOTIVATION: Genomics has revolutionized biological research, but quality assessment of the resulting assembled sequences is complicated and remains mostly limited to technical measures like N50. RESULTS: We propose a measure for quantitative assessment of genome assembly and annotation completeness based on evolutionarily informed expectations of gene content. We implemented the assessment procedure in open-source software, with sets of Benchmarking Universal Single-Copy Orthologs, named BUSCO. AVAILABILITY AND IMPLEMENTATION: Software implemented in Python and datasets available for download from http://busco.ezlab.org. CONTACT: [email protected] SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Felipe A. Simão, Robert M. Waterhouse, Panagiotis Ioannidis 0001, Evgenia V. Kriventseva, Evgeny M. Zdobnov
 Bioinform.3