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Mali Shen

dblp:163/7666 · DBLP profile ↗
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5ranked-venue papers
1as first author
1since 2021 · last 2021
0000-0002-6400-6247ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 3 · 1 since 2021Systems, architecture and hardware · 2Graphics, computer vision, multimedia, augmented reality and games · 2 · 1 first-authorApplied, interdisciplinary, general and emerging computing · 2 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
2 papers
Robot manipulation · 44% Motion planning and robot control · 22% Segmentation and scene understanding · 15%

Topics — the 8 heaviest of 9, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Computer vision › Segmentation and scene understanding
medical image segmentation
0.412020
Pathological Airway Segmentation with Cascaded Neural Networks for Bronchoscopic Navigation · ICRA 2020
Robotics › Robot manipulation › medical robotics
bronchoscopic intervention robot
0.312018
Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC) · ICRA 2018
Robotics › Robot manipulation
continuum robot
0.312018
Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC) · ICRA 2018
Robotics › Motion planning and robot control › robot kinematics
continuum robot kinematics
0.312018
Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC) · ICRA 2018
Robotics › Robot manipulation
medical robotics
0.312018
Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC) · ICRA 2018
Robotics › Motion planning and robot control
robot kinematics
0.312018
Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC) · ICRA 2018
Robotics › Robot manipulation › continuum robot
tendon-driven continuum robot
0.312018
Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC) · ICRA 2018
Machine learning › Deep learning architectures and training › feedforward neural network
cascaded network
0.112020
Pathological Airway Segmentation with Cascaded Neural Networks for Bronchoscopic Navigation · ICRA 2020

Methods — techniques the papers use, named apart from their topics

morphological operations · 0.4cascaded 2d+3d neural networks · 0.4adversarial training · 0.4statistical kinematic modeling · 0.3laser profiling fabrication · 0.3constant curvature kinematic modeling · 0.3
YearPublicationVenuePosition
2021 Deep Graph-Based Multimodal Feature Embedding for Endomicroscopy Image Retrieval
abstract
Representation learning is a critical task for medical image analysis in computer-aided diagnosis. However, it is challenging to learn discriminative features due to the limited size of the data set and the lack of labels. In this article, we propose a deep graph-based multimodal feature embedding (DGMFE) framework for medical image retrieval with application to breast tissue classification by learning discriminative features of probe-based confocal laser endomicroscopy (pCLE). We first build a multimodality graph model based on the visual similarity between pCLE data and reference histology images. The latent similar pCLE-histology pairs are extracted by walking with the cyclic path on the graph while the dissimilar pairs are extracted based on the geodesic distance. Given the similar and dissimilar pairs, the latent feature space is discovered by reconstructing the similarity between pCLE and histology images via deep Siamese neural networks. The proposed method is evaluated on a clinical database with 700 pCLE mosaics. The accuracy of image retrieval demonstrates that DGMFE can outperform previous works on feature learning. Especially, the top-1 accuracy in an eight-class retrieval task is 0.739, thus demonstrating a 10% improvement compared to the state-of-the-art method.
Yun Gu, Khushi Vyas, Mali Shen, Jie Yang 0002, Guang-Zhong Yang
IEEE Trans. Neural Networks Learn. Syst.3
2020 Pathological Airway Segmentation with Cascaded Neural Networks for Bronchoscopic Navigation
abstract
Robotic bronchoscopic intervention requires detailed 3D airway maps for both localisation and enhanced visualisation, especially at peripheral airways. Patient-specific airway maps can be generated from preoperative chest CT scans. Due to pathological abnormalities and anatomical variations, automatically delineating the airway tree with distal branches is a challenging task. In the paper, we propose a cascaded 2D+3D model that has been tailored for airway segmentation from pathological CT scans. A novel 2D neural network is developed to generate the initial predictions where the peripheral airways are refined by a 3D adversarial training model. A sampling strategy based on a sequence of morphological operations is employed for the concatenation of the 2D and 3D models. The method has been validated on 20 pathological CT scans with results demonstrating improved segmentation accuracy and consistency, especially in peripheral airways.
Mali Shen, Pallav L. Shah, Guang-Zhong Yang
ICRA2
2019 AirwayNet: A Voxel-Connectivity Aware Approach for Accurate Airway Segmentation Using Convolutional Neural Networks
Yulei Qin, Hao Zheng 0008, Yun Gu, Mali Shen, Jie Yang 0002, Xiaolin Huang, Yue Min Zhu, Guang-Zhong Yang
MICCAI (6)5
2018 Design and Kinematics Characterization of a Laser-Profiled Continuum Manipulator for the Guidance of Bronchoscopic Instruments * This work was supported by Engineering and Physical Sciences Research Council (EPSRC), United Kingdom (EP/N019318/1). Ning Liu and Mali Shen are also supported by Chinese Scholarship Council (CSC)
abstract
Bronchoscopic intervention, as a minimally invasive method for the diagnosis and treatment of lung diseases, has attracted more and more attention in recent years. However, existing endobronchial instruments lack the steerability accessing the peripheral airways with difficult bifurcations. This paper presents a novel wire-driven dexterous manipulator for the guidance of such instruments. Precision laser profiling is used to cut a stainless steel tube into multiple interlocked segments with revolute joints. The outer diameter of the manipulator is 2.20 mm which is small enough to be inserted into the working channels of most commercial bronchoscopes and distal airways, while keeping a large inner lumen with a diameter of 1.44 mm for passing various bronchoscopic instruments. The small bending radius provides enough flexibility to navigate inside the complex bronchial tree. Two kinematic models are proposed to predict the manipulator configuration from the translation of actuation wires. The former model is geometrically derived with the assumption of constant curvature bending and the latter one is statistically driven by capturing the motion trajectories of manipulator joints. A prototype of our low-cost add-on instrument guidance robot for bronchoscopic intervention is presented which can be easily integrated into current clinical routine.
Mohamed E. M. K. Abdelaziz, Mali Shen, Guang-Zhong Yang
ICRA3
2017 BRANCH: Bifurcation Recognition for Airway Navigation based on struCtural cHaracteristics
Mali Shen, Stamatia Giannarou, Pallav L. Shah, Guang-Zhong Yang
MICCAI (2)1