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Ninette Amariglio

dblp:183/4470 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2016
—ORCID · unresolved

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › structural bioinformatics
protein structure
0.212016
e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures · Bioinform. 2016
Bioinformatics and computational biology › transcriptomics
RNA editing
0.212016
e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures · Bioinform. 2016
Bioinformatics and computational biology › genome annotation
genomic variant annotation
0.112016
e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures · Bioinform. 2016

Methods — techniques the papers use, named apart from their topics

structure mapping · 0.2recoding event modeling · 0.2
YearPublicationVenuePosition
2016 e23D: database and visualization of A-to-I RNA editing sites mapped to 3D protein structures
abstract
UNLABELLED: e23D, a database of A-to-I RNA editing sites from human, mouse and fly mapped to evolutionary related protein 3D structures, is presented. Genomic coordinates of A-to-I RNA editing sites are converted to protein coordinates and mapped onto 3D structures from PDB or theoretical models from ModBase. e23D allows visualization of the protein structure, modeling of recoding events and orientation of the editing with respect to nearby genomic functional sites from databases of disease causing mutations and genomic polymorphism. AVAILABILITY AND IMPLEMENTATION: http://www.sheba-cancer.org.il/e23D CONTACT: [email protected] or [email protected].
Oz Solomon, Eran Eyal, Ninette Amariglio, Ron Unger, Gideon Rechavi
Bioinform.3