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Daniel Zhou

dblp:185/3979 · DBLP profile ↗
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3ranked-venue papers
0as first author
3since 2021 · last 2025
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 2 · 2 since 2021Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
1 paper
Probabilistic and Bayesian machine learning · 67% Deep learning architectures and training · 33%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Computational science and engineering · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Probabilistic and Bayesian machine learning › stochastic processes › gaussian process
gaussian process regression
0.912025
Dynamic Bayesian Learning for Spatiotemporal Mechanistic Models · J. Mach. Learn. Res. 2025
Machine learning › Probabilistic and Bayesian machine learning › hierarchical modeling
hierarchical bayesian model
0.912025
Dynamic Bayesian Learning for Spatiotemporal Mechanistic Models · J. Mach. Learn. Res. 2025
Machine learning › Deep learning architectures and training
state space model
0.912025
Dynamic Bayesian Learning for Spatiotemporal Mechanistic Models · J. Mach. Learn. Res. 2025
Computational science and engineering
inverse problem
0.312025
Dynamic Bayesian Learning for Spatiotemporal Mechanistic Models · J. Mach. Learn. Res. 2025

Methods — techniques the papers use, named apart from their topics

transfer learning · 1.7markov chain monte carlo · 1.7hierarchical state-space models · 1.7gaussian process regression · 1.7
YearPublicationVenuePosition
2025 Dynamic Bayesian Learning for Spatiotemporal Mechanistic Models
abstract
We develop an approach for Bayesian learning of spatiotemporal dynamical mechanistic models. Such learning consists of statistical emulation of the mechanistic system that can efficiently interpolate the output of the system from arbitrary inputs. The emulated learner can then be used to train the system from noisy data achieved by melding information from observed data with the emulated mechanistic system. This joint melding of mechanistic systems employ hierarchical state-space models with Gaussian process regression. Assuming the dynamical system is controlled by a finite collection of inputs, Gaussian process regression learns the effect of these parameters through a number of training runs, driving the stochastic innovations of the spatiotemporal state-space component. This enables efficient modeling of the dynamics over space and time. This article details exact inference with analytically accessible posterior distributions in hierarchical matrix-variate Normal and Wishart models in designing the emulator. This step obviates expensive iterative algorithms such as Markov chain Monte Carlo or variational approximations. We also show how emulation is applicable to large-scale emulation by designing a dynamic Bayesian transfer learning framework. Inference on mechanistic model parameters proceeds using Markov chain Monte Carlo as a post-emulation step using the emulator as a regression component. We demonstrate this framework through solving inverse problems arising in the analysis of ordinary and partial nonlinear differential equations and, in addition, to a black-box computer model generating spatiotemporal dynamics across a graphical model.
Sudipto Banerjee, Xiang 'Anthony' Chen, Ian Frankenburg, Daniel Zhou
J. Mach. Learn. Res.4
2023 Characterizing Racial Disparity in Cancers by Predicting Candidate Biomarker
abstract
Cancer is an abnormal division of cells and can spread to multiple tissues. Race has been reported as a determining factor in cancer susceptibility and, therefore, survival rate. The risks of malignancies among individuals of African ancestry and Asians compared to Caucasians are reported to be distinctive. Genetic factors due to mutations in DNA have been linked to the cause of specific cancer types and could play a key role in the survival of cancer patients. The Cancer Genome Atlas (TCGA) is a project initiated by the National Cancer Institute with the goal of characterizing genetic patterns for 34 cancer types/subtypes.By processing the genome sequencing datasets of TCGA cancers, we calculated the number of mutated genes (mutation frequency) for each TCGA cancer type and selected top five cancers based on the count of the uniquely mutated genes in cancer patients of different ethnicities. We then identified overlapping genes through conducting proportion tests for their mutation frequencies between races in each of selected cancers to look for evidence of racial disparity. Lastly, we performed functional annotation, key pathway analyses, and protein conserved domain detection for uniquely mutated genes between races.Our study revealed key cancer pathways and protein domains of identified driver genes contributing to the disparity in mortality rates between races. We developed a bioinformatics pipeline method for comparing survival disparities between races of TCGA cancers, which is deployed in the Google Colab notebook. The research findings from our study could offer racial-specific therapy recommendations for various malignancies.)
Judy Bai, Daniel Zhou
BIBM2
2022 MFC-Prov: Media forensics challenge image provenance evaluation and data analysis on large-scale datasets
Xiongnan Jin, Yooyoung Lee, Jon Fiscus, Haiying Guan, Amy N. Yates, Andrew Delgado, Daniel Zhou
Neurocomputing7