Applying deep neural networks to 3D point cloud processing has demonstrated a rapid pace of advancement in those domains where 3D geometry information can greatly boost task performance, such as AR/VR, robotics, and autonomous driving. However, as the size of both the neural network model and 3D point cloud continues to scale, reducing the entailed computation and memory access overhead is a primary challenge to meet strict latency and energy constraints of practical applications. This paper proposes a new weight pruning technique for 3D point cloud based on spatial point distribution. We identify that particular groups of neighborhood voxels in 3D point cloud contribute more frequently to actual output features than others. Based on this observation, we propose to selectively prune less contributing groups of neighborhood voxels first to reduce the computation overhead while minimizing the impact on model accuracy. We apply our proposal to three representative sparse 3D convolution libraries. Our proposal reduces the inference latency by 1.60× on average and energy consumption by 1.74× on NVIDIA GV100 GPU with no loss in accuracy metric

Similarity search or nearest neighbor search is a task of retrieving a set of vectors in the (vector) database that are most similar to the provided query vector. It has been a key kernel for many applications for a long time. However, it is becoming especially more important in recent days as modern neural networks and machine learning models represent the semantics of images, videos, and documents as high-dimensional vectors called embeddings. Finding a set of similar embeddings for the provided query embedding is now the critical operation for modern recommender systems and semantic search engines. Since exhaustively searching for the most similar vectors out of billion vectors is such a prohibitive task, approximate nearest neighbor search (ANNS) is often utilized in many real-world use cases. Unfortunately, we find that utilizing the server-class CPUs and GPUs for the ANNS task leads to suboptimal performance and energy efficiency. To address such limitations, we propose a specialized architecture named ANNA (Approximate Nearest Neighbor search Accelerator), which is compatible with state-of-the-art ANNS algorithms such as Google ScaNN and Facebook Faiss. By combining the benefits of a specialized dataflow pipeline and efficient data reuse, ANNA achieves multiple orders of magnitude higher energy efficiency, 2.3-61.6× higher throughput, and 4.3-82.1× lower latency than the conventional CPU or GPU for both million- and billion-scale datasets.

Deep neural networks (DNNs) with embedding layers are widely adopted to capture complex relationships among entities within a dataset. Embedding layers aggregate multiple embeddings — a dense vector used to represent the complicated nature of a data feature— into a single embedding; such operation is called embedding reduction. Embedding reduction spends a significant portion of its runtime on reading embeddings from memory and thus is known to be heavily memory-bandwidth-bound. Recent works attempt to accelerate this critical operation, but they often require either hardware modifications or emerging memory technologies, which makes it hardly deployable on commodity hardware. Thus, we propose MERCI, Memoization for Embedding Reduction with ClusterIng, a novel memoization framework for efficient embedding reduction. MERCI provides a mechanism for memoizing partial aggregation of correlated embeddings and retrieving the memoized partial result at a low cost. MERCI substantially reduces the number of memory accesses by 44% (29%), leading to 102% (74%) throughput improvement on real machines and 40.2% (28.6%) energy savings at the expense of 8×(1×) additional memory usage.

The self-attention mechanism is rapidly emerging as one of the most important key primitives in neural networks (NNs) for its ability to identify the relations within input entities. The self-attention-oriented NN models such as Google Transformer and its variants have established the state-of-the-art on a very wide range of natural language processing tasks, and many other self-attention-oriented models are achieving competitive results in computer vision and recommender systems as well. Unfortunately, despite its great benefits, the self-attention mechanism is an expensive operation whose cost increases quadratically with the number of input entities that it processes, and thus accounts for a significant portion of the inference runtime. Thus, this paper presents ELSA (Efficient, Lightweight Self-Attention), a hardware-software co-designed solution to substantially reduce the runtime as well as energy spent on the self-attention mechanism. Specifically, based on the intuition that not all relations are equal, we devise a novel approximation scheme that significantly reduces the amount of computation by efficiently filtering out relations that are unlikely to affect the final output. With the specialized hardware for this approximate self-attention mechanism, ELSA achieves a geomean speedup of 58.1× as well as over three orders of magnitude improvements in energy efficiency compared to GPU on self-attention computation in modern NN models while maintaining less than 1% loss in the accuracy metric.

Inverted index serves as a fundamental data structure for efficient search across various applications such as full-text search engine, document analytics and other information retrieval systems. The storage requirement and query load for these structures have been growing at a rapid rate. Thus, an ideal indexing system should maintain a small index size with a low query processing time. Previous works have mainly focused on using CPUs and GPUs to exploit query parallelism while utilizing state-of-the-art compression schemes to fit the index in memory. However, scaling parallelism to maximally utilize memory bandwidth on these architectures is still challenging. In this work, we present IIU, a novel inverted index processing unit, to optimize the query performance while maintaining a low memory overhead for index storage. To this end, we co-design the indexing scheme and hardware accelerator so that the accelerator can process highly compressed inverted index at a high throughput. In addition, IIU provides flexible interconnects between modules to take advantage of both intra- and inter-query parallelism. Our evaluation using a cycle-level simulator demonstrates that IIU provides an average of 13.8\times× query latency reduction and 5.4\times× throughput improvement across different query types, while reducing the average energy consumption by 18.6\times×, compared to Apache Lucene, a production-grade full-text search framework.

In this paper, we describe our vision to accelerate algorithms in the domain of genomic data analysis by proposing a framework called Genesis (genome analysis) that contains an interface and an implementation of a system that processes genomic data efficiently. This framework can be deployed in the cloud and exploit the FPGAs-as-a-service paradigm to provide cost-efficient secondary DNA analysis. We propose conceptualizing genomic reads and associated read attributes as a very large relational database and using extended SQL as a domain-specific language to construct queries that form various data manipulation operations. To accelerate such queries, we design a Genesis hardware library which consists of primitive hardware modules that can be composed to construct a dataflow architecture specialized for those queries. As a proof of concept for the Genesis framework, we present the architecture and the hardware implementation of several genomic analysis stages in the secondary analysis pipeline corresponding to the best known software analysis toolkit, GATK4 workflow proposed by the Broad Institute. We walk through the construction of genomic data analysis operations using a sequence of SQL-style queries and show how Genesis hardware library modules can be utilized to construct the hardware pipelines designed to accelerate such queries. We exploit parallelism and data reuse by utilizing a dataflow architecture along with the use of on-chip scratchpads as well as non-blocking APIs to manage the accelerators, allowing concurrent execution of the accelerator and the host. Our accelerated system deployed on the cloud FPGA performs up to 19.3× better than GATK4 running on a commodity multi-core Xeon server and obtains up to 15× better cost savings. We believe that if a software algorithm can be mapped onto a hardware library to utilize the underlying accelerator(s) using an already-standardized software interface such as SQL, while allowing the efficient mapping of such interface to primitive hardware modules as we have demonstrated here, it will expedite the acceleration of domainspecific algorithms and allow the easy adaptation of algorithm changes.

Garbage collection (GC) is a standard feature for high productivity programming, saving a programmer from many nasty memory-related bugs. However, these productivity benefits come with a cost in terms of application throughput, worst-case latency, and energy consumption. Since the first introduction of GC by the Lisp programming language in the 1950s, a myriad of hardware and software techniques have been proposed to reduce this cost. While the idea of accelerating GC in hardware is appealing, its impact has been very limited due to narrow coverage, lack of flexibility, intrusive system changes, and significant hardware cost. Even with specialized hardware GC performance is eventually limited by memory bandwidth bottleneck. Fortunately, emerging 3D stacked DRAM technologies shed new light on this decades-old problem by enabling efficient near-memory processing with ample memory bandwidth. Thus, we propose Charon1, the first 3D stacked memory-based GC accelerator. Through a detailed performance analysis of HotSpot JVM, we derive a set of key algorithmic primitives based on their GC time coverage and implementation complexity in hardware. Then we devise a specialized processing unit to substantially improve their memory-level parallelism and throughput with a low hardware cost. Our evaluation of Charon with the full-production HotSpot JVM running two big data analytics frameworks, Spark and GraphChi, demonstrates a 3.29× geomean speedup and 60.7% energy savings for GC over the baseline 8-core out-of-order processor.