Jacqueline Matthew

dblp:187/6064 · DBLP profile ↗
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13ranked-venue papers
0as first author
4since 2021 · last 2023
0000-0003-4754-0322ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 13 · 4 since 2021Graphics, computer vision, multimedia, augmented reality and games · 8 · 1 since 2021
YearPublicationVenuePosition
2023 Fast fetal head compounding from multi-view 3D ultrasound
Robert Wright, Alberto Gómez 0002, Veronika A. M. Zimmer, Nicolas Toussaint, Bishesh Khanal, Jacqueline Matthew, Emily Skelton, Bernhard Kainz, Daniel Rueckert, Joseph V. Hajnal, Julia A. Schnabel
Medical Image Anal.6
2023 Placenta segmentation in ultrasound imaging: Addressing sources of uncertainty and limited field-of-view
abstract
Automatic segmentation of the placenta in fetal ultrasound (US) is challenging due to the (i) high diversity of placenta appearance, (ii) the restricted quality in US resulting in highly variable reference annotations, and (iii) the limited field-of-view of US prohibiting whole placenta assessment at late gestation. In this work, we address these three challenges with a multi-task learning approach that combines the classification of placental location (e.g., anterior, posterior) and semantic placenta segmentation in a single convolutional neural network. Through the classification task the model can learn from larger and more diverse datasets while improving the accuracy of the segmentation task in particular in limited training set conditions. With this approach we investigate the variability in annotations from multiple raters and show that our automatic segmentations (Dice of 0.86 for anterior and 0.83 for posterior placentas) achieve human-level performance as compared to intra- and inter-observer variability. Lastly, our approach can deliver whole placenta segmentation using a multi-view US acquisition pipeline consisting of three stages: multi-probe image acquisition, image fusion and image segmentation. This results in high quality segmentation of larger structures such as the placenta in US with reduced image artifacts which are beyond the field-of-view of single probes.
Veronika A. M. Zimmer, Alberto Gómez 0002, Emily Skelton, Robert Wright, Gavin Wheeler, Shujie Deng, Nooshin Ghavami, Karen Lloyd, Jacqueline Matthew, Bernhard Kainz, Daniel Rueckert, Joseph V. Hajnal, Julia A. Schnabel
Medical Image Anal.9
2021 Detecting Hypo-plastic Left Heart Syndrome in Fetal Ultrasound via Disease-Specific Atlas Maps
Samuel Budd, Matthew Sinclair, Thomas G. Day, Athanasios Vlontzos, Jeremy Tan, Tianrui Liu 0001, Jacqueline Matthew, Emily Skelton, John M. Simpson, Reza Razavi, Ben Glocker, Daniel Rueckert, Emma C. Robinson, Bernhard Kainz
MICCAI (7)7
2021 Mutual Information-Based Disentangled Neural Networks for Classifying Unseen Categories in Different Domains: Application to Fetal Ultrasound Imaging
abstract
Deep neural networks exhibit limited generalizability across images with different entangled domain features and categorical features. Learning generalizable features that can form universal categorical decision boundaries across domains is an interesting and difficult challenge. This problem occurs frequently in medical imaging applications when attempts are made to deploy and improve deep learning models across different image acquisition devices, across acquisition parameters or if some classes are unavailable in new training databases. To address this problem, we propose Mutual Information-based Disentangled Neural Networks (MIDNet), which extract generalizable categorical features to transfer knowledge to unseen categories in a target domain. The proposed MIDNet adopts a semi-supervised learning paradigm to alleviate the dependency on labeled data. This is important for real-world applications where data annotation is time-consuming, costly and requires training and expertise. We extensively evaluate the proposed method on fetal ultrasound datasets for two different image classification tasks where domain features are respectively defined by shadow artifacts and image acquisition devices. Experimental results show that the proposed method outperforms the state-of-the-art on the classification of unseen categories in a target domain with sparsely labeled training data.
Qingjie Meng, Jacqueline Matthew, Veronika A. M. Zimmer, Alberto Gómez 0002, David Lloyd 0003, Daniel Rueckert, Bernhard Kainz
IEEE Trans. Medical Imaging2
2019 Confident Head Circumference Measurement from Ultrasound with Real-Time Feedback for Sonographers
Samuel Budd, Matthew Sinclair, Bishesh Khanal, Jacqueline Matthew, David Lloyd 0003, Alberto Gómez 0002, Nicolas Toussaint, Emma C. Robinson, Bernhard Kainz
MICCAI (4)4
2019 Complete Fetal Head Compounding from Multi-view 3D Ultrasound
Robert Wright, Nicolas Toussaint, Alberto Gómez 0002, Veronika A. M. Zimmer, Bishesh Khanal, Jacqueline Matthew, Emily Skelton, Bernhard Kainz, Daniel Rueckert, Joseph V. Hajnal, Julia A. Schnabel
MICCAI (3)6
2019 Towards Whole Placenta Segmentation at Late Gestation Using Multi-view Ultrasound Images
Veronika A. M. Zimmer, Alberto Gómez 0002, Emily Skelton, Nicolas Toussaint, Tong Zhang 0017, Bishesh Khanal, Robert Wright, Yohan Noh, Alison Ho, Jacqueline Matthew, Joseph V. Hajnal, Julia A. Schnabel
MICCAI (5)10
2019 Weakly Supervised Estimation of Shadow Confidence Maps in Fetal Ultrasound Imaging
abstract
Detecting acoustic shadows in ultrasound images is important in many clinical and engineering applications. Real-time feedback of acoustic shadows can guide sonographers to a standardized diagnostic viewing plane with minimal artifacts and can provide additional information for other automatic image analysis algorithms. However, automatically detecting shadow regions using learning-based algorithms is challenging because pixel-wise ground truth annotation of acoustic shadows is subjective and time consuming. In this paper, we propose a weakly supervised method for automatic confidence estimation of acoustic shadow regions. Our method is able to generate a dense shadow-focused confidence map. In our method, a shadow-seg module is built to learn general shadow features for shadow segmentation, based on global image-level annotations as well as a small number of coarse pixel-wise shadow annotations. A transfer function is introduced to extend the obtained binary shadow segmentation to a reference confidence map. In addition, a confidence estimation network is proposed to learn the mapping between input images and the reference confidence maps. This network is able to predict shadow confidence maps directly from input images during inference. We use evaluation metrics such as DICE, inter-class correlation, and so on, to verify the effectiveness of our method. Our method is more consistent than human annotation and outperforms the state-of-the-art quantitatively in shadow segmentation and qualitatively in confidence estimation of shadow regions. Furthermore, we demonstrate the applicability of our method by integrating shadow confidence maps into tasks such as ultrasound image classification, multi-view image fusion, and automated biometric measurements.
Qingjie Meng, Richard James Housden, Jacqueline Matthew, Daniel Rueckert, Julia A. Schnabel, Bernhard Kainz, Matthew Sinclair, Veronika A. M. Zimmer, Benjamin Hou, Martin Rajchl, Nicolas Toussaint, Ozan Oktay, Jo Schlemper, Alberto Gómez 0002
IEEE Trans. Medical Imaging3
2018 3D Fetal Skull Reconstruction from 2DUS via Deep Conditional Generative Networks
Juan J. Cerrolaza, Carlo Biffi, Alberto Gómez 0002, Matthew Sinclair, Jacqueline Matthew, Caronline Knight, Bernhard Kainz, Daniel Rueckert
MICCAI (1)6
2018 Fast Multiple Landmark Localisation Using a Patch-Based Iterative Network
Amir Alansary, Juan J. Cerrolaza, Bishesh Khanal, Matthew Sinclair, Jacqueline Matthew, Chandni Gupta, Caroline L. Knight, Bernhard Kainz, Daniel Rueckert
MICCAI (1)6
2018 Standard Plane Detection in 3D Fetal Ultrasound Using an Iterative Transformation Network
Bishesh Khanal, Benjamin Hou, Amir Alansary, Juan J. Cerrolaza, Matthew Sinclair, Jacqueline Matthew, Chandni Gupta, Caroline L. Knight, Bernhard Kainz, Daniel Rueckert
MICCAI (1)7
2017 SonoNet: Real-Time Detection and Localisation of Fetal Standard Scan Planes in Freehand Ultrasound
abstract
Identifying and interpreting fetal standard scan planes during 2-D ultrasound mid-pregnancy examinations are highly complex tasks, which require years of training. Apart from guiding the probe to the correct location, it can be equally difficult for a non-expert to identify relevant structures within the image. Automatic image processing can provide tools to help experienced as well as inexperienced operators with these tasks. In this paper, we propose a novel method based on convolutional neural networks, which can automatically detect 13 fetal standard views in freehand 2-D ultrasound data as well as provide a localization of the fetal structures via a bounding box. An important contribution is that the network learns to localize the target anatomy using weak supervision based on image-level labels only. The network architecture is designed to operate in real-time while providing optimal output for the localization task. We present results for real-time annotation, retrospective frame retrieval from saved videos, and localization on a very large and challenging dataset consisting of images and video recordings of full clinical anomaly screenings. We found that the proposed method achieved an average F1-score of 0.798 in a realistic classification experiment modeling real-time detection, and obtained a 90.09% accuracy for retrospective frame retrieval. Moreover, an accuracy of 77.8% was achieved on the localization task.
Christian F. Baumgartner, Konstantinos Kamnitsas, Jacqueline Matthew, Tara P. Fletcher, Sandra Smith, Lisa M. Koch, Bernhard Kainz, Daniel Rueckert
IEEE Trans. Medical Imaging3
2016 Real-Time Standard Scan Plane Detection and Localisation in Fetal Ultrasound Using Fully Convolutional Neural Networks
Christian F. Baumgartner, Konstantinos Kamnitsas, Jacqueline Matthew, Sandra Smith, Bernhard Kainz, Daniel Rueckert
MICCAI (2)3