VLDB 2026 Research / reviewers in the wild / expert
Harrisen Scells
dblp:194/5258 · also Harry Scells
· DBLP profile ↗
45ranked-venue papers in the field
17as first author
29since 2021 · last 2026
0000-0001-9578-7157ORCID · verified
Domains — venue-derived; a paper can count in several
Information Retrieval & Web Search · 44 (17 first)Data Mining & Knowledge Discovery · 1
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | An Open SERP Mining Infrastructure for the Archive Query Log
Jan Heinrich Merker, Simon Ruth, Harrisen Scells, Martin Potthast |
ECIR (4) | 3 |
| 2026 | Humans, LLMs, and Measures Do Not Align in Attributed Information RetrievalabstractEvaluating attributed information retrieval (AIR) systems requires assessing both informativeness and attributability. To enable scalable evaluation, LLM-sourced ground truth data is frequently used, yet the validity of this practice remains unclear. We replicate the evaluation framework of Djeddal et al. [1] which relies on LLM-written ground truth answers, and additionally crowdsource human-written answers and pairwise preference judgments. This allows us to investigate (1) how robust reference-based evaluation measures are to gold reference variation; (2) to what extent do LLM judges agree with human annotators; and (3) which automatic measures best predict human and LLM preferences? Our findings reveal substantial sensitivity of reference-based measures to gold reference choice, and human and LLM judges exhibiting low agreement on preference judgments, despite similar aggregate tendencies. Furthermore, no automatic evaluation measure strongly predicts human preferences, suggesting a fundamental methodological shortcoming in current AIR evaluation practices. Lukas Gienapp, Jenny Lang, Martin Potthast, Harrisen Scells |
SIGIR | 4 |
| 2026 | Topic-Specific Classifiers are Better Relevance Judges than Prompted LLMsabstractThe unjudged document problem, where systems that did not contribute to the original judgement pool may retrieve documents without a relevance judgement, is a key obstacle to the reuseability of test collections in information retrieval. While the de facto standard to deal with the problem is to treat unjudged documents as non-relevant, many alternatives have been proposed, such as the use of large language models (LLMs) as a relevance judge (LLM-as-a-judge). However, this has been criticized, among other things, as circular, since the same LLM can be used as the ranker and the judge. We propose to train topic-specific relevance classifiers instead: By finetuning monoT5 with independent LoRA weight adaptation on the judgments of a single assessor for a single topic's pool, we align it to that assessor's notion of relevance for the topic. The system rankings obtained through our classifier's relevance judgments achieve a Spearmans' $ρ$ correlation of $>0.94$ with ground truth system rankings. As little as 128 initial human judgments per topic suffice to improve the comparability of models, compared to treating unjudged documents as non-relevant, while achieving more reliability than existing LLM-as-a-judge approaches. Topic-specific relevance classifiers are thus a lightweight and straightforward way to tackle the unjudged document problem, while maintaining human judgments as the gold standard for retrieval evaluation. Code, models, and data are made openly available. Lukas Gienapp, Martin Potthast, Andrew Yates, Harrisen Scells, Eugene Yang 0001 |
SIGIR | 4 |
| 2026 | Understanding Wacky Weights: A Dissection of SPLADE's Learned Term ImportanceabstractLearned sparse retrieval models such as SPLADE combine the effectiveness of neural architectures with the efficiency of inverted indices. As these models assign weights to terms from a fixed vocabulary, interpretability is often touted as a major benefit of these models. However, the emergence of wacky weights, i.e., expansion terms that appear semantically unrelated to the input, limits interpretability. While prior research has anecdotally observed this phenomenon, there is a lack of systematic understanding regarding their origins, prevalence, and contribution to retrieval effectiveness. In this paper, we reproduce SPLADE-v2 to systematically investigate wacky weights across the SPLADE family of models. We present a comprehensive dissection of wacky weights, providing a formal definition of wackiness based on the lexical utility of expansion terms. Furthermore, we introduce a novel measure to compare the prevalence of these tokens across models with varying vocabularies and sparsity levels. Beyond reproducing the original SPLADE-v2, we train it with various loss functions, datasets, and backbone transformers to isolate the factors contributing to wackiness. Our results show that larger vocabularies are associated with a higher prevalence of wacky tokens, while stricter sparsity regularizers are associated with lower prevalence. Finally, we find that wacky weights are used primarily for in-domain effectiveness rather than out-of-domain generalization. Gregory Polyakov, Harrisen Scells, Carsten Eickhoff |
SIGIR | 2 |
| 2025 | Corpus Subsampling: Estimating the Effectiveness of Neural Retrieval Models on Large Corpora
Maik Fröbe, Andrew Parry, Harrisen Scells, Shuai Wang 0032, Shengyao Zhuang, Guido Zuccon, Martin Potthast, Matthias Hagen |
ECIR (1) | 3 |
| 2025 | Ranking Generated Answers - On the Agreement of Retrieval Models with Humans on Consumer Health Questions
Sebastian Heineking, Jonas Probst, Daniel Steinbach, Martin Potthast, Harrisen Scells |
ECIR (3) | 5 |
| 2025 | Overview of Touché 2025: Argumentation Systems - Extended Abstract
Johannes Kiesel, Çagri Çöltekin, Marcel Gohsen, Sebastian Heineking, Maximilian Heinrich, Maik Fröbe, Tim Hagen, Mohammad Aliannejadi, Tomaz Erjavec, Matthias Hagen, Matyás Kopp, Nikola Ljubesic, Katja Meden, Nailia Mirzakhmedova, Vaidas Morkevicius, Harrisen Scells, Ines Zelch, Martin Potthast, Benno Stein 0001 |
ECIR (5) | 16 |
| 2025 | DenseReviewer: A Screening Prioritisation Tool for Systematic Review Based on Dense Retrieval
Xinyu Mao 0001, Teerapong Leelanupab, Harrisen Scells, Guido Zuccon |
ECIR (5) | 3 |
| 2025 | Web-Scale Retrieval Experimentation with chatnoir-pyterrier
Jan Heinrich Merker, Janek Bevendorff, Maik Fröbe, Tim Hagen, Harrisen Scells, Matti Wiegmann, Benno Stein 0001, Matthias Hagen, Martin Potthast |
ECIR (5) | 5 |
| 2025 | Set-Encoder: Permutation-Invariant Inter-passage Attention for Listwise Passage Re-ranking with Cross-Encoders
Ferdinand Schlatt, Maik Fröbe, Harrisen Scells, Shengyao Zhuang, Bevan Koopman, Guido Zuccon, Benno Stein 0001, Martin Potthast, Matthias Hagen |
ECIR (2) | 3 |
| 2025 | Rank-DistiLLM: Closing the Effectiveness Gap Between Cross-Encoders and LLMs for Passage Re-ranking
Ferdinand Schlatt, Maik Fröbe, Harrisen Scells, Shengyao Zhuang, Bevan Koopman, Guido Zuccon, Benno Stein 0001, Martin Potthast, Matthias Hagen |
ECIR (3) | 3 |
| 2025 | Reassessing Large Language Model Boolean Query Generation for Systematic ReviewsabstractSystematic reviews are comprehensive literature reviews that address highly focused research questions and represent the highest form of evidence in medicine. A critical step in this process is the development of complex Boolean queries to retrieve relevant literature. Given the difficulty of manually constructing these queries, recent efforts have explored Large Language Models (LLMs) to assist in their formulation. One of the first studies, Wang et al. [21], investigated ChatGPT for this task, followed by Staudinger et al. [14], which evaluated multiple LLMs in a reproducibility study. However, the latter overlooked several key aspects of the original work, including (i) validation of generated queries (ii) output formatting constraints, and (iii) selection of examples for chainof- thought (Guided) prompting. As a result, its findings diverged significantly from the original study. In this work, we systematically reproduce both studies while addressing these overlooked factors. Our results show that query effectiveness varies significantly across models and prompt designs, with guided query formulation benefiting from well-chosen seed studies. Overall, prompt design and model selection are key drivers of successful query formulation. Our findings provide a clearer understanding of LLMs' potential in Boolean query generation and highlight the importance of modeland prompt-specific optimisations. The complex nature of systematic reviews adds to challenges in both developing and reproducing methods but also highlights the importance of reproducibility studies in this domain. Shuai Wang 0032, Harrisen Scells, Bevan Koopman, Guido Zuccon |
SIGIR | 2 |
| 2025 | The Viability of Crowdsourcing for RAG EvaluationabstractHow good are humans at writing and judging responses in retrieval-augmented generation (RAG) scenarios? To answer this question, we investigate the efficacy of crowdsourcing for RAG through two complementary studies: response writing and response utility judgment. Our new Webis Crowd RAG Corpus 2025 (Webis-CrowdRAG-25) consists of 903 human-written and 903 LLM-generated responses for the 301 topics of the TREC 2024 RAG~track, with each response composed according to one of the three discourse styles 'bullet list', 'essay', or 'news'. For a selection of 65 topics, the corpus further contains 47,320 pairwise human judgments and 10,556 pairwise LLM judgments across seven utility dimensions (e.g., coverage and coherence). Our analyses give insights into human writing behavior for RAG and the viability of crowdsourcing for RAG evaluation. We find that human pairwise judgments provide reliable and cost-effective results. This is much less the case for LLM-based pairwise and human/LLM-based pointwise judgments, nor for automated comparisons with human-written reference responses. All our data and tools are freely available. Lukas Gienapp, Tim Hagen, Maik Fröbe, Matthias Hagen, Benno Stein 0001, Martin Potthast, Harrisen Scells |
SIGIR | 7 |
| 2025 | TIREx Tracker: The Information Retrieval Experiment TrackerabstractThe reproducibility and transparency of retrieval experiments depends on the availability of information about the experimental setup. However, the manual collection of experiment metadata can be tedious, error-prone, and inconsistent, which calls for an automated systematic collection. Expanding ir_metadata, we present the TIREx tracker, a tool that records hardware configurations, power/CPU/RAM/GPU usage, and experiment/system versions. Implemented as a lightweight platform-independent C binary, the TIREx tracker integrates seamlessly into Python, Java, or C/C++ workflows and can be easily integrated into shard task submissions, as we demonstrate for the TIRA/TIREx platform. Code, binaries, and documentation of the TIREx tracker are publicly available at https://github.com/tira-io/tirex-tracker. Tim Hagen, Maik Fröbe, Jan Heinrich Merker, Harrisen Scells, Matthias Hagen, Martin Potthast |
SIGIR | 4 |
| 2025 | AiReview: An Open Platform for Accelerating Systematic Reviews with LLMsabstractSystematic reviews are fundamental to evidence-based medicine.Creating one is time-consuming and labour-intensive, mainly due to the need to screen, or assess, many studies for inclusion in the review.Existing tools help streamline this process, mostly using traditional machine learning.Large language models (LLMs) offer new opportunities to speed up screening, yet no tool currently enables users to directly apply LLMs or ensures systematic and transparent use of these methods.This paper presents (i) a flexible framework for using LLMs in systematic review tasks, especially title and abstract screening, and (ii) a web-based interface for LLMassisted screening.Together, they form AiReview-a novel platform that connects cutting-edge LLM-assisted screening methods with real-world systematic review practice.The live tool is available at https://aireview.ielab.io.We also release the code publicly at https://github.com/ielab/ai-review. Xinyu Mao 0001, Teerapong Leelanupab, Martin Potthast, Harrisen Scells, Guido Zuccon |
SIGIR | 4 |
| 2025 | Variations in Relevance Judgments and the Shelf Life of Test CollectionsabstractThe fundamental property of Cranfield-style evaluations, that system rankings are stable even when assessors disagree on individual relevance decisions, was validated on traditional test collections. However, the paradigm shift towards neural retrieval models affected the characteristics of modern test collections, e.g., documents are short, judged with four grades of relevance, and information needs have no descriptions or narratives. Under these changes, it is unclear whether assessor disagreement remains negligible for system comparisons. We investigate this aspect under the additional condition that the few modern test collections are heavily re-used. Given more possible query interpretations due to less formalized information needs, an ''expiration date'' for test collections might be needed if top-effectiveness requires overfitting to a single interpretation of relevance. We run a reproducibility study and re-annotate the relevance judgments of the 2019~TREC Deep Learning track. We can reproduce prior work in the neural retrieval setting, showing that assessor disagreement does not affect system rankings. However, we observe that some models substantially degrade with our new relevance judgments, and some have already reached the effectiveness of humans as rankers, providing evidence that test collections can expire. Andrew Parry, Maik Fröbe, Harrisen Scells, Ferdinand Schlatt, Guglielmo Faggioli, Saber Zerhoudi, Sean MacAvaney, Eugene Yang 0001 |
SIGIR | 3 |
| 2024 | Zero-Shot Generative Large Language Models for Systematic Review Screening Automation
Shuai Wang 0032, Harrisen Scells, Shengyao Zhuang, Martin Potthast, Bevan Koopman, Guido Zuccon |
ECIR (1) | 2 |
| 2024 | Resources for Combining Teaching and Research in Information Retrieval CourseworkabstractThe first International Workshop on Open Web Search (WOWS) was held on Thursday, March 28th, at ECIR 2024 in Glasgow, UK. The full-day workshop had two calls for contributions: the first call aimed at scientific contributions to building, operating, and evaluating search engines cooperatively and the cooperative use of the web as a resource for researchers and innovators. The second call for implementations of retrieval components aimed to gain practical experience with joint, cooperative evaluation of search engines and their components. In total, 2~papers were accepted for the first call, and 11~software components were submitted for the second. The workshop ended with breakout sessions on how the OpenWebSearch.eu project can incorporate collaborative evaluations and a hub of search engines. Maik Fröbe, Harrisen Scells, Theresa Elstner, Christopher Akiki, Lukas Gienapp, Jan Heinrich Merker, Sean MacAvaney, Benno Stein 0001, Matthias Hagen, Martin Potthast |
SIGIR | 2 |
| 2024 | Evaluating Generative Ad Hoc Information RetrievalabstractRecent advances in large language models have enabled the development of viable generative retrieval systems. Instead of a traditional document ranking, generative retrieval systems often directly return a grounded generated text as a response to a query. Quantifying the utility of the textual responses is essential for appropriately evaluating such generative ad hoc retrieval. Yet, the established evaluation methodology for ranking-based ad hoc retrieval is not suited for the reliable and reproducible evaluation of generated responses. To lay a foundation for developing new evaluation methods for generative retrieval systems, we survey the relevant literature from the fields of information retrieval and natural language processing, identify search tasks and system architectures in generative retrieval, develop a new user model, and study its operationalization. Lukas Gienapp, Harrisen Scells, Niklas Deckers, Janek Bevendorff, Shuai Wang 0032, Johannes Kiesel, Shahbaz Syed, Maik Fröbe, Guido Zuccon, Benno Stein 0001, Matthias Hagen, Martin Potthast |
SIGIR | 2 |
| 2023 | The Archive Query Log: Mining Millions of Search Result Pages of Hundreds of Search Engines from 25 Years of Web ArchivesabstractThe Archive Query Log (AQL) is a previously unused, comprehensive query log collected at the Internet Archive over the last 25 years. Its first version includes 356 million queries, 137 million search result pages, and 1.4 billion search results across 550 search providers. Although many query logs have been studied in the literature, the search providers that own them generally do not publish their logs to protect user privacy and vital business data. Of the few query logs publicly available, none combines size, scope, and diversity. The AQL is the first to do so, enabling research on new retrieval models and (diachronic) search engine analyses. Provided in a privacy-preserving manner, it promotes open research as well as more transparency and accountability in the search industry. Jan Heinrich Merker, Sebastian Heineking, Maik Fröbe, Lukas Gienapp, Harrisen Scells, Benno Stein 0001, Matthias Hagen, Martin Potthast |
SIGIR | 5 |
| 2023 | pybool_ir: A Toolkit for Domain-Specific Search ExperimentsabstractUndertaking research in domain-specific scenarios such as systematic review literature search, legal search, and patent search can often have a high barrier of entry due to complicated indexing procedures and complex Boolean query syntax. Indexing and searching document collections like PubMed in off-the-shelf tools such as Elasticsearch and Lucene often yields less accurate (and less effective) results than the PubMed search engine, i.e., retrieval results do not match what would be retrieved if one issued the same query to PubMed. Furthermore, off-the-shelf tools have their own nuanced query languages and do not allow directly using the often large and complicated Boolean queries seen in domain-specific search scenarios. The pybool_ir toolkit aims to address these problems and to lower the barrier to entry for developing new methods for domain-specific search. The toolkit is an open source package available at https://github.com/hscells/pybool_ir. Harrisen Scells, Martin Potthast |
SIGIR | 1 |
| 2023 | Smooth Operators for Effective Systematic Review QueriesabstractEffective queries are crucial to minimising the time and cost of medical systematic reviews, as all retrieved documents must be judged for relevance. Boolean queries, developed by expert librarians, are the standard for systematic reviews. They guarantee reproducible and verifiable retrieval and more control than free-text queries. However, the result sets of Boolean queries are unranked and difficult to control due to the strict Boolean operators. We address these problems in a single unified retrieval model by formulating a class of smooth operators that are compatible with and extend existing Boolean operators. Our smooth operators overcome several shortcomings of previous extensions of the Boolean retrieval model. In particular, our operators are independent of the underlying ranking function, so that exact-match and large language model rankers can be combined in the same query. We found that replacing Boolean operators with equivalent or similar smooth operators often improves the effectiveness of queries. Their properties make tuning a query to precision or recall intuitive and allow greater control over how documents are retrieved. This additional control leads to more effective queries and reduces the cost of systematic reviews. Harrisen Scells, Ferdinand Schlatt, Martin Potthast |
SIGIR | 1 |
| 2023 | Can ChatGPT Write a Good Boolean Query for Systematic Review Literature Search?abstractSystematic reviews are comprehensive literature reviews for a highly focused research question. These reviews are considered the highest form of evidence in medicine. Complex Boolean queries are developed as part of the systematic review creation process to retrieve literature, as they permit reproducibility and understandability. However, it is difficult and time-consuming to develop high-quality Boolean queries, often requiring the expertise of expert searchers like librarians. Recent advances in transformer-based generative models have shown their ability to effectively follow user instructions and generate answers based on these instructions. In this paper, we investigate ChatGPT as a means for automatically formulating and refining complex Boolean queries for systematic review literature search. Overall, our research finds that ChatGPT has the potential to generate effective Boolean queries. The ability of ChatGPT to follow complex instructions and generate highly precise queries makes it a tool of potential value for researchers conducting systematic reviews, particularly for rapid reviews where time is a constraint and where one can trade off higher precision for lower recall. We also identify several caveats in using ChatGPT for this task, highlighting that this technology needs further validation before it is suitable for widespread uptake. Shuai Wang 0032, Harrisen Scells, Bevan Koopman, Guido Zuccon |
SIGIR | 2 |
| 2022 | Seed-Driven Document Ranking for Systematic Reviews: A Reproducibility Study
Shuai Wang 0032, Harrisen Scells, Ahmed Mourad, Guido Zuccon |
ECIR (1) | 2 |
| 2022 | Reduce, Reuse, Recycle: Green Information Retrieval ResearchabstractRecent advances in Information Retrieval utilise energy-intensive hardware to produce state-of-the-art results. In areas of research highly related to Information Retrieval, such as Natural Language Processing and Machine Learning, there have been efforts to quantify and reduce the power and emissions produced by methods that depend on such hardware. Research that is conscious of the environmental impacts of its experimentation and takes steps to mitigate some of these impacts is considered 'Green'. Given the continuous demand for more data and power-hungry techniques, Green research is likely to become more important within the broader research community. Therefore, within the Information Retrieval community, the consequences of non-Green (in other words, Red) research should at least be considered and acknowledged. As such, the aims of this perspective paper are fourfold: (1) to review the Green literature not only for Information Retrieval but also for related domains in order to identify transferable Green techniques; (2) to provide measures for quantifying the power usage and emissions of Information Retrieval research; (3) to report the power usage and emission impacts for various current IR methods; and (4) to provide a framework to guide Green Information Retrieval research, taking inspiration from 'reduce, reuse, recycle' waste management campaigns, including salient examples from the literature that implement these concepts. Harrisen Scells, Shengyao Zhuang, Guido Zuccon |
SIGIR | 1 |
| 2022 | From Little Things Big Things Grow: A Collection with Seed Studies for Medical Systematic Review Literature SearchabstractMedical systematic review query formulation is a highly complex task done by trained information specialists. Complexity comes from the reliance on lengthy Boolean queries, which express a detailed research question. To aid query formulation, information specialists use a set of exemplar documents, called 'seed studies', prior to query formulation. Seed studies help verify the effectiveness of a query prior to the full assessment of retrieved studies. Beyond this use of seeds, specific IR methods can exploit seed studies for guiding both automatic query formulation and new retrieval models. One major limitation of work to date is that these methods exploit 'pseudo seed studies' through retrospective use of included studies (i.e., relevance assessments). However, we show pseudo seed studies are not representative of real seed studies used by information specialists. Hence, we provide a test collection with real world seed studies used to assist with the formulation of queries. To support our collection, we provide an analysis, previously not possible, on how seed studies impact retrieval and perform several experiments using seed study based methods to compare the effectiveness of using seed studies versus pseudo seed studies. We make our test collection and the results of all of our experiments and analysis available at http://github.com/ielab/sysrev-seed-collection. Shuai Wang 0032, Harrisen Scells, Justin Clark, Bevan Koopman, Guido Zuccon |
SIGIR | 2 |
| 2021 | PECAN: A Platform for Searching Chat ConversationsabstractOften, existing chat services that organisations and individuals use today provide a way to search through previously sent messages. However, many of these chat services provide far-limited search functionalities, typically exact matching on individual messages. In this paper, we introduce a new task for addressing this problem, called searching for conversations, whereby the aim is to retrieve and rank groups of related messages given a search query. We promote this task by providing a platform for research and development called PECAN. Our platform provides all the necessary functionality researchers need to conduct experiments on searching for conversations. Our system is also generic so as to support organisations and individuals who wish to search through their chat message archives. Kunpeng Qin, Harrisen Scells, Guido Zuccon |
SIGIR | 2 |
| 2021 | Big Brother: A Drop-In Website Interaction Logging ServiceabstractFine-grained logging of interactions in user studies is important for studying user behaviour, among other reasons. However, in many research scenarios, the way interactions are logged is usually tied to a monolithic system. We present a generic, application-independent service for logging interactions in web-pages, specifically targetting user studies. Our service, Big Brother, can be dropped-in to existing user interfaces with almost no configuration required by researchers. Big Brother has already been used in several user studies to record interactions in a number of user study research scenarios, such as lab-based and crowdsourcing environments. We further demonstrate the ability for Big Brother to scale to very large user studies through benchmarking experiments. Big Brother also provides a number of additional tools for visualising and analysing interactions. Big Brother significantly lowers the barrier to entry for logging user interactions by providing a minimal but powerful, no configuration necessary, service for researchers and practitioners of user studies that can scale to thousands of concurrent sessions. We have made the source code and releases for Big Brother available for download at https://github.com/hscells/bigbro. Harrisen Scells, Jimmy, Guido Zuccon |
SIGIR | 1 |
| 2021 | A comparison of automatic Boolean query formulation for systematic reviews
Harrisen Scells, Guido Zuccon, Bevan Koopman |
Inf. Retr. J. | 1 |
| 2020 | You Can Teach an Old Dog New Tricks: Rank Fusion applied to Coordination Level Matching for Ranking in Systematic Reviews
Harrisen Scells, Guido Zuccon, Bevan Koopman |
ECIR (1) | 1 |
| 2020 | A Computational Approach for Objectively Derived Systematic Review Search Strategies
Harrisen Scells, Guido Zuccon, Bevan Koopman, Justin Clark |
ECIR (1) | 1 |
| 2020 | Systematic Review Automation Tools for End-to-End Query FormulationabstractSystematic reviews are used widely in the biomedical and healthcare domains. Systematic reviews aim to provide a complete and exhaustive overview of the medical literature for a specific research question. Core to the construction of a systematic review is the search strategy. The main component of a search strategy is a complex Boolean query, typically developed by information specialists (e.g., librarians). The aim of the search strategy is to retrieve relevant studies that will contribute to the outcomes of the systematic review. One barrier information specialists face when developing a search strategy is the enormous amount of medical literature that exists in databases. This vast amount of literature means that search strategies often suffer from biases (e.g., lack of expertise, overconfidence, limited knowledge of the domain) and are incomplete, or retrieve far too many studies (possibly as a result of the biases, but also due to the tools used to develop search strategies). Retrieving too many studies impacts the time and financial costs of the review, and retrieving too few studies may impact the outcomes of the review. Therefore, it is vital to support expert searchers develop effective search strategies. In this paper, we present a novel end-to-end set of advanced tools for information specialists. These tools are tightly integrated into an existing Open Source search strategy refining package (searchrefiner). These tools aim to address the problems associated with search strategy development by providing a complete framework from query development, to refinement, to documentation. The implementation of these tools also offers a glimpse at the ease at which related tools may be implemented within the searchrefiner ecosystem. More information about the tools including installation, documentation, and screenshots is made available on the searchrefiner website: https://ielab.io/searchrefiner. Hang Li 0009, Harrisen Scells, Guido Zuccon |
SIGIR | 2 |
| 2020 | Automatic Boolean Query Formulation for Systematic Review Literature SearchabstractFormulating Boolean queries for systematic review literature search is a challenging task. Commonly, queries are formulated by information specialists using the protocol specified in the review and interactions with the research team. Information specialists have in-depth experience on how to formulate queries in this domain, but may not have in-depth knowledge about the reviews’ topics. Query formulation requires a significant amount of time and effort, and is performed interactively; specialists repeatedly formulate queries, attempt to validate their results, and reformulate specific Boolean clauses. In this paper, we investigate the possibility of automatically formulating a Boolean query from the systematic review protocol. We propose a novel five-step approach to automatic query formulation, specific to Boolean queries in this domain, which approximates the process by which information specialists formulate queries. In this process, we use syntax parsing to derive the logical structure of high-level concepts in a query, automatically extract and map concepts to entities in order to perform entity expansion, and finally apply post-processing operations (such as stemming and search filters). Harrisen Scells, Guido Zuccon, Bevan Koopman, Justin Clark |
WWW | 1 |
| 2020 | Sampling Query Variations for Learning to Rank to Improve Automatic Boolean Query Generation in Systematic ReviewsabstractSearching medical literature for synthesis in a systematic review is a complex and labour intensive task. In this context, expert searchers construct lengthy Boolean queries. The universe of possible query variations can be massive: a single query can be composed of hundreds of field-restricted search terms/phrases or ontological concepts, each grouped by a logical operator nested to depths of sometimes five or more levels deep. With the many choices about how to construct a query, it is difficult to both formulate and recognise effective queries. To address this challenge, automatic methods have recently been explored for generating and selecting effective Boolean query variations for systematic reviews. The limiting factor of these methods is that it is computationally infeasible to process all query variations for training the methods. To overcome this, we propose novel query variation sampling methods for training Learning to Rank models to rank queries. Our results show that query sampling methods do directly impact the ability of a Learning to Rank model to effectively identify good query variations. Thus, selecting appropriate query sampling methods is a key problem for the automatic reformulation of effective Boolean queries for systematic review literature search. We find that the best sampling strategies are those which balance the diversity of queries with the quantity of queries. Harrisen Scells, Guido Zuccon, Mohamed A. Sharaf, Bevan Koopman |
WWW | 1 |
| 2019 | Causality Discovery with Domain Knowledge for Drug-Drug Interactions Discovery
Sitthichoke Subpaiboonkit, Xue Li 0001, Xin Zhao 0013, Harrisen Scells, Guido Zuccon |
ADMA | 4 |
| 2019 | TrecTools: an Open-source Python Library for Information Retrieval Practitioners Involved in TREC-like CampaignsabstractThis paper introduces TrecTools, a Python library for assisting Information Retrieval (IR) practitioners with TREC-like campaigns. IR practitioners tasked with activities like building test collections, evaluating systems, or analysing results from empirical experiments commonly have to resort to use a number of different software tools and scripts that each perform an individual functionality - and at times they even have to implement ad-hoc scripts of their own. TrecTools aims to provide a unified environment for performing these common activities. João R. M. Palotti, Harrisen Scells, Guido Zuccon |
SIGIR | 2 |
| 2019 | Automatic Boolean Query Refinement for Systematic Review Literature SearchabstractIn the medical domain, systematic reviews are a highly trustworthy evidence source used to inform clinical diagnosis and treatment, and governmental policy making. Systematic reviews must be complete in that all relevant literature for the research question of the review must be synthesised in order to produce a recommendation. To identify the literature to screen for inclusion in systematic reviews, information specialists construct complex Boolean queries that capture the information needs defined by the research questions of the systemic review. However, in the quest for total recall, these Boolean queries return many non relevant results. Harrisen Scells, Guido Zuccon, Bevan Koopman |
WWW | 1 |
| 2018 | searchrefiner: A Query Visualisation and Understanding Tool for Systematic ReviewsabstractWe present an open source tool, searchrefiner, for researchers that conduct medical systematic reviews to assist in formulating, visualising, and understanding Boolean queries. The searchrefiner web interface allows researchers to explore how Boolean queries retrieve citations in existing, popular query syntaxes used in systematic review literature search. The web interface allows researchers to perform tasks such as using validation citations to ensure queries are retrieving a minimum set of known relevant citations, and editing Boolean queries by dragging and dropping clauses in a structured editor. In addition, the tools provided by the searchrefiner interface allow researchers to visualise why the queries they formulate retrieve citations, and ways to understand how to refine queries into more effective ones. searchrefiner is targeted at both experts and novices, as a tool for query formulation and refinement, and as a tool for training users to search for literature to compile systematic reviews. Harrisen Scells, Guido Zuccon |
CIKM | 1 |
| 2018 | Improving Systematic Review Creation With Information RetrievalabstractSystematic reviews, in particular medical systematic reviews, are time consuming and costly to produce but are of value for clinical decision making, policy, and regulations. The largest contributing factors to the time and monetary costs are the searching (including the formulation of queries) and screening processes. These initial processes involve researchers reading the abstracts of thousands and sometimes hundreds of thousands of research articles to determine if the retrieved articles should be included or excluded from the systematic review. This research explores automatic methodologies to reduce the workload relating to the searching and initial screening processes. The objective of this research is to use Information Retrieval techniques to improve the retrieval of literature for medical systematic reviews. Harrisen Scells |
SIGIR | 1 |
| 2018 | Query Variation Performance Prediction for Systematic ReviewsabstractWhen conducting systematic reviews, medical researchers heavily deliberate over the final query to pose to the information retrieval system. Given the possible query variations that they could construct, selecting the best performing query is difficult. This motivates a new type of query performance prediction (QPP) task where the challenge is to estimate the performance of a set of query variations given a particular topic. Query variations are the reductions, expansions and modifications of a given seed query under the hypothesis that there exists some variations (either generated from permutations or hand crafted) which will improve retrieval effectiveness over the original query. We use the CLEF 2017 TAR Collection, to evaluate sixteen pre and post retrieval predictors for the task of Query Variation Performance Prediction (QVPP). Our findings show the IDF based QPPs exhibits the strongest correlations with performance. However, when using QPPs to select the best query, little improvement over the original query can be obtained, despite the fact that there are query variations which perform significantly better. Our findings highlight the difficulty in identifying effective queries within the context of this new task, and motivates further research to develop more accurate methods to help systematic review researchers in the query selection process. Harrisen Scells, Leif Azzopardi, Guido Zuccon, Bevan Koopman |
SIGIR | 1 |
| 2018 | An Information Retrieval Experiment Framework for Domain Specific ApplicationsabstractWe present a framework for constructing and executing information retrieval experiment pipelines. The framework as a whole is built primarily for domain specific applications such as medical literature search for systematic reviews, or finding factually or legally applicable case law in the legal domain; however it can also be used for more general tasks. There are a number of pre-implemented components that enable common information retrieval experiments such as ad-hoc retrieval or query analysis through query performance predictors. In addition, this collection of tools seeks to be user friendly, well documented, and easily extendible. Finally, the entire pipeline can be distributed as a single binary with no dependencies, ready to use with a simple domain specific language (DSL) for constructing pipelines. Harrisen Scells, Daniel Locke, Guido Zuccon |
SIGIR | 1 |
| 2018 | Generating Better Queries for Systematic ReviewsabstractSystematic reviews form the cornerstone of evidence based medicine, aiming to answer complex medical questions based on all evidence currently available. Key to the effectiveness of a systematic review is an (often large) Boolean query used to search large publication repositories. These Boolean queries are carefully crafted by researchers and information specialists, and often reviewed by a panel of experts. However, little is known about the effectiveness of the Boolean queries at the time of formulation. In this paper we investigate whether a better Boolean query than that defined in the protocol of a systematic review, can be created, and we develop methods for the transformation of a given Boolean query into a more effective one. Our approach involves defining possible transformations of Boolean queries and their clauses. It also involves casting the problem of identifying a transformed query that is better than the original into: (i) a classification problem; and (ii) a learning to rank problem. Empirical experiments are conducted on a real set of systematic reviews. Analysis of results shows that query transformations that are better than the original queries do exist, and that our approaches are able to select more effective queries from the set of possible transformed queries so as to maximise different target effectiveness measures. Harrisen Scells, Guido Zuccon |
SIGIR | 1 |
| 2017 | Integrating the Framing of Clinical Questions via PICO into the Retrieval of Medical Literature for Systematic ReviewsabstractThe PICO process is a technique used in evidence based practice to frame and answer clinical questions. It involves structuring the question around four types of clinical information: population, intervention, control or comparison and outcome. The PICO framework is used extensively in the compilation of systematic reviews as the means of framing research questions. However, when a search strategy (comprising of a large Boolean query) is formulated to retrieve studies for inclusion in the review, PICO is often ignored. This paper evaluates how PICO annotations can be applied and integrated into retrieval to improve the screening of studies for inclusion in systematic reviews. The task is to increase precision while maintaining the high level of recall essential to ensure systematic reviews are representative and unbiased. Our results show that restricting the search strategies to match studies using PICO annotations improves precision, however recall is slightly reduced, when compared to the non-PICO baseline. This can lead to both time and cost savings when compiling systematic reviews. Harrisen Scells, Guido Zuccon, Bevan Koopman, Anthony Deacon, Leif Azzopardi, Shlomo Geva |
CIKM | 1 |
| 2017 | The Lucene for Information Access and Retrieval Research (LIARR) Workshop at SIGIR 2017abstractAs an empirical discipline, information access and retrieval research requires substantial software infrastructure to index and search large collections. This workshop is motivated by the desire to better align information retrieval research with the practice of building search applications from the perspective of open-source information retrieval systems. Our goal is to promote the use of Lucene for information access and retrieval research. Leif Azzopardi, Matt Crane, Hui Fang 0001, Grant Ingersoll, Jimmy Lin, Yashar Moshfeghi, Harrisen Scells, Guido Zuccon |
SIGIR | 7 |
| 2017 | A Test Collection for Evaluating Retrieval of Studies for Inclusion in Systematic ReviewsabstractThis paper introduces a test collection for evaluating the effectiveness of different methods used to retrieve research studies for inclusion in systematic reviews. Systematic reviews appraise and synthesise studies that meet specific inclusion criteria. Systematic reviews intended for a biomedical science audience use boolean queries with many, often complex, search clauses to retrieve studies; these are then manually screened to determine eligibility for inclusion in the review. This process is expensive and time consuming. The development of systems that improve retrieval effectiveness will have an immediate impact by reducing the complexity and resources required for this process. Our test collection consists of approximately 26 million research studies extracted from the freely available MEDLINE database, 94 review (query) topics extracted from Cochrane systematic reviews, and corresponding relevance assessments. Tasks for which the collection can be used for information retrieval system evaluation are described and the use of the collection to evaluate common baselines within one such task is demonstrated. The test collection is available at https://github.com/ielab/SIGIR2017-PICO-Collection. Harrisen Scells, Guido Zuccon, Bevan Koopman, Anthony Deacon, Leif Azzopardi, Shlomo Geva |
SIGIR | 1 |