Rickmer Braren

dblp:195/6221 · also Rickmer F. Braren · DBLP profile ↗
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10ranked-venue papers
0as first author
10since 2021 · last 2026
0000-0001-6039-6957ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 10 · 10 since 2021Graphics, computer vision, multimedia, augmented reality and games · 7 · 7 since 2021
YearPublicationVenuePosition
2026 PISCO: Self-supervised k-space regularization for improved neural implicit k-space representations of dynamic MRI
abstract
Neural implicit k-space representations (NIK) have shown promising results for dynamic magnetic resonance imaging (MRI) at high temporal resolutions. Yet, reducing acquisition time, and thereby available training data, results in severe performance drops due to overfitting. To address this, we introduce a novel self-supervised k-space loss function L PISCO , applicable for regularization of NIK-based reconstructions. The proposed loss function is based on the concept of parallel imaging-inspired self-consistency (PISCO), enforcing a consistent global k-space neighborhood relationship without requiring additional data. Quantitative and qualitative evaluations on static and dynamic MR reconstructions show that integrating PISCO significantly improves NIK representations, making it a competitive dynamic reconstruction method without constraining the temporal resolution. Particularly at high acceleration factors (R ≥ 50), NIK with PISCO can avoid temporal oversmoothing of state-of-the-art methods and achieves superior spatio-temporal reconstruction quality. Furthermore, an extensive analysis of the loss assumptions and stability shows PISCO’s potential as versatile self-supervised k-space loss function for further applications and architectures. Code is available at: https://github.com/compai-lab/2025-pisco-spieker
Veronika Spieker, Hannah Eichhorn, Wenqi Huang 0003, Jonathan K. Stelter, Tabita Catalán, Rickmer Braren, Daniel Rueckert, Francisco Sahli Costabal, Kerstin Hammernik, Dimitrios C. Karampinos, Claudia Prieto, Julia A. Schnabel
Medical Image Anal.6
2025 Temporal Neural Cellular Automata: Application to Modeling of Contrast Enhancement in Breast MRI
Daniel Lang 0003, Richard Osuala, Veronika Spieker, Karim Lekadir, Rickmer Braren, Julia A. Schnabel
MICCAI (4)5
2025 A Holistic Time-Aware Classification Model for Multimodal Longitudinal Patient Data
Tobias Susetzky, Huaqi Qiu, Rickmer Braren, Daniel Rueckert
MICCAI (1)3
2025 Real-world federated learning in radiology: hurdles to overcome and benefits to gain
abstract
OBJECTIVE: Federated Learning (FL) enables collaborative model training while keeping data locally. Currently, most FL studies in radiology are conducted in simulated environments due to numerous hurdles impeding its translation into practice. The few existing real-world FL initiatives rarely communicate specific measures taken to overcome these hurdles. To bridge this significant knowledge gap, we propose a comprehensive guide for real-world FL in radiology. Minding efforts to implement real-world FL, there is a lack of comprehensive assessments comparing FL to less complex alternatives in challenging real-world settings, which we address through extensive benchmarking. MATERIALS AND METHODS: We developed our own FL infrastructure within the German Radiological Cooperative Network (RACOON) and demonstrated its functionality by training FL models on lung pathology segmentation tasks across six university hospitals. Insights gained while establishing our FL initiative and running the extensive benchmark experiments were compiled and categorized into the guide. RESULTS: The proposed guide outlines essential steps, identified hurdles, and implemented solutions for establishing successful FL initiatives conducting real-world experiments. Our experimental results prove the practical relevance of our guide and show that FL outperforms less complex alternatives in all evaluation scenarios. DISCUSSION AND CONCLUSION: Our findings justify the efforts required to translate FL into real-world applications by demonstrating advantageous performance over alternative approaches. Additionally, they emphasize the importance of strategic organization, robust management of distributed data and infrastructure in real-world settings. With the proposed guide, we are aiming to aid future FL researchers in circumventing pitfalls and accelerating translation of FL into radiological applications.
Markus Bujotzek, Ünal Akünal, Stefan Denner, Peter Neher, Maximilian Zenk, Eric Frodl, Astha Jaiswal, Moon S. Kim 0002, Nicolai R. Krekiehn, Manuel Nickel, Richard Ruppel, Marcus Both, Felix Doellinger, Marcel Opitz, Thorsten Persigehl, Jens Kleesiek, Tobias Penzkofer, Klaus H. Maier-Hein, Andreas Bucher, Rickmer Braren
J. Am. Medical Informatics Assoc.20
2024 Data-Driven Tissue- and Subject-Specific Elastic Regularization for Medical Image Registration
Anna Reithmeir, Lina Felsner, Rickmer Braren, Julia A. Schnabel, Veronika A. M. Zimmer
MICCAI (2)3
2024 Self-supervised k-Space Regularization for Motion-Resolved Abdominal MRI Using Neural Implicit k-Space Representations
Veronika Spieker, Hannah Eichhorn, Jonathan K. Stelter, Wenqi Huang 0003, Rickmer Braren, Daniel Rueckert, Francisco Sahli Costabal, Kerstin Hammernik, Claudia Prieto, Dimitrios C. Karampinos, Julia A. Schnabel
MICCAI (7)5
2023 3D Arterial Segmentation via Single 2D Projections and Depth Supervision in Contrast-Enhanced CT Images
Alina Dima, Veronika A. M. Zimmer, Martin J. Menten, Hongwei Li 0004, Markus M. Graf, Tristan Lemke, Philipp Raffler, Robert Graf, Jan Kirschke, Rickmer Braren, Daniel Rueckert
MICCAI (1)10
2023 Xplainer: From X-Ray Observations to Explainable Zero-Shot Diagnosis
Chantal Pellegrini, Matthias Keicher, Ege Özsoy, Petra Jiraskova, Rickmer Braren, Nassir Navab
MICCAI (5)5
2023 The Liver Tumor Segmentation Benchmark (LiTS)
abstract
In this work, we report the set-up and results of the Liver Tumor Segmentation Benchmark (LiTS), which was organized in conjunction with the IEEE International Symposium on Biomedical Imaging (ISBI) 2017 and the International Conferences on Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2017 and 2018. The image dataset is diverse and contains primary and secondary tumors with varied sizes and appearances with various lesion-to-background levels (hyper-/hypo-dense), created in collaboration with seven hospitals and research institutions. Seventy-five submitted liver and liver tumor segmentation algorithms were trained on a set of 131 computed tomography (CT) volumes and were tested on 70 unseen test images acquired from different patients. We found that not a single algorithm performed best for both liver and liver tumors in the three events. The best liver segmentation algorithm achieved a Dice score of 0.963, whereas, for tumor segmentation, the best algorithms achieved Dices scores of 0.674 (ISBI 2017), 0.702 (MICCAI 2017), and 0.739 (MICCAI 2018). Retrospectively, we performed additional analysis on liver tumor detection and revealed that not all top-performing segmentation algorithms worked well for tumor detection. The best liver tumor detection method achieved a lesion-wise recall of 0.458 (ISBI 2017), 0.515 (MICCAI 2017), and 0.554 (MICCAI 2018), indicating the need for further research. LiTS remains an active benchmark and resource for research, e.g., contributing the liver-related segmentation tasks in http://medicaldecathlon.com/. In addition, both data and online evaluation are accessible via https://competitions.codalab.org/competitions/17094.
Patrick Bilic, Patrick Ferdinand Christ, Hongwei Li 0004, Eugene Vorontsov, Avi Ben-Cohen, Georgios Kaissis, Adi Szeskin, Colin Jacobs, Gabriel Efrain Humpire Mamani, Gabriel Chartrand, Fabian Lohöfer, Julian Walter Holch, Wieland H. Sommer, Felix Hofmann, Alexandre Hostettler, Naama Lev-Cohain, Michal Drozdzal, Michal Amitai, Refael Vivanti, Jacob Sosna, Ivan Ezhov, Anjany Sekuboyina, Fernando Navarro, Florian Kofler, Johannes C. Paetzold, Suprosanna Shit, Xiaobin Hu, Jana Lipková, Markus Rempfler, Marie Piraud, Jan Kirschke, Benedikt Wiestler, Christian Hülsemeyer, Marcel Beetz, Florian Ettlinger, Michela Antonelli, Woong Bae, Miriam Bellver, Lei Bi 0001, Hao Chen 0011, Grzegorz Chlebus, Erik Dam, Qi Dou 0001, Chi-Wing Fu, Bogdan Georgescu, Xavier Giró-i-Nieto, Felix Grün, Xu Han 0009, Pheng-Ann Heng, Jürgen Hesser, Jan Hendrik Moltz, Christian Igel, Fabian Isensee, Paul F. Jaeger, Fucang Jia, Krishna Chaitanya Kaluva, Mahendra Khened, Ildoo Kim, Jae-Hun Kim, Sungwoong Kim, Simon Kohl, Tomasz K. Konopczynski, Avinash Kori, Ganapathy Krishnamurthi, Xiaomeng Li 0001, John S. Lowengrub, Jun Ma 0016, Klaus H. Maier-Hein, Kevis-Kokitsi Maninis, Hans Meine, Dorit Merhof, Akshay Pai, Mathias Perslev, Jens Petersen, Jordi Pont-Tuset, Xiaojuan Qi 0001, Oliver Rippel, Karsten Roth, Ignacio Sarasua, Andrea Schenk, Zengming Shen, Jordi Torres, Christian Wachinger, Chunliang Wang, Leon Weninger, Daguang Xu, Xiaoping Yang 0001, Simon C. H. Yu, Yading Yuan, Miao Yue, Liping Zhang 0009, Manuel Jorge Cardoso, Spyridon Bakas, Rickmer Braren, Volker Heinemann, Christopher Joseph Pal, An Tang, Samuel Kadoury, Luc Soler, Bram van Ginneken, Hayit Greenspan, Leo Joskowicz, Bjoern Menze
Medical Image Anal.100
2021 Longitudinal Quantitative Assessment of COVID-19 Infection Progression from Chest CTs
Seong Tae Kim 0001, Leili Goli, Magdalini Paschali, Ashkan Khakzar, Matthias Keicher, Tobias Czempiel, Egon Burian, Rickmer Braren, Nassir Navab, Thomas Wendler 0001
MICCAI (7)8