BACKGROUND: Automatic cell tracking methods enable practitioners to analyze cell behaviors efficiently. Notwithstanding the continuous development of relevant software, user-friendly visualization tools have room for further improvements. Typical visualization mostly comes with main cell tracking tools as a simple plug-in, or relies on specific software/platforms. Although some tools are standalone, limited visual interactivity is provided, or otherwise cell tracking outputs are partially visualized. RESULTS: This paper proposes a self-reliant visualization system, CellTrackVis, to support quick and easy analysis of cell behaviors. Interconnected views help users discover meaningful patterns of cell motions and divisions in common web browsers. Specifically, cell trajectory, lineage, and quantified information are respectively visualized in a coordinated interface. In particular, immediate interactions among modules enable the study of cell tracking outputs to be more effective, and also each component is highly customizable for various biological tasks. CONCLUSIONS: CellTrackVis is a standalone browser-based visualization tool. Source codes and data sets are freely available at http://github.com/scbeom/celltrackvis with the tutorial at http://scbeom.github.io/ctv_tutorial .

Meeting or conference assistance is a popular application that typically requires compact configurations of co-located audio and visual sensors. This paper proposes a novel solution for online separation of an unknown and time-varying number of moving sources using only a single microphone array co-located with a single visual device. The approach exploits the complementary nature of simultaneous audio and visual measurements, accomplished by a model-centric 3-stage process of detection, tracking, and (spatial) filtering, which performs separation in a block-wise or recursive fashion. Fusing the measurements requires solving the multi-modal space-time permutation problem, since the audio and visual measurements reside in different observation spaces, but also are unidentified or unlabeled (with respect to the unknown and time-varying number of sources), and are subject to noise, extraneous measurements and missing measurements. A labeled random finite set tracking filter is applied to resolve the permutation problem and recursively estimate the source identities and trajectories. A time-varying set of generalized side-lobe cancellers is constructed based on the tracking estimates to perform online separation. Evaluations are undertaken with live human speakers.