VLDB 2026 Research / reviewers in the wild / expert
Chung Hang Jonathan Choi
dblp:224/2898
· DBLP profile ↗
1ranked-venue papers
0as first author
0since 2021 · last 2018
0000-0003-2935-7217ORCID · verified
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 2 heaviest of 2, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › RNA biology › RNA analysis › RNA bioinformatics
RNA sequence design |
0.3 | 1 | 2018 | A comprehensive web tool for toehold switch design · Bioinform. 2018 |
Bioinformatics and computational biology
synthetic biology |
0.3 | 1 | 2018 | A comprehensive web tool for toehold switch design · Bioinform. 2018 |
Methods — techniques the papers use, named apart from their topics
sequence-structure analysis · 0.3
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2018 | A comprehensive web tool for toehold switch designabstractMotivation: Toehold switches are a class of RNAs with a hairpin loop that can be unfolded upon binding a trigger RNA, thereby exposing a ribosome binding site (RBS) and permitting translation of the reporter protein. They have been shown very useful in detecting a variety of targets including RNAs from Zika and Ebola viruses. The base complementation between the toehold switch and the trigger RNA also makes it sensitive to sequence variations. Design of toehold switches involves a series of considerations related to their sequence properties, structures and specificities. Results: Here we present the first comprehensive web tool for designing toehold switches. We also propose a score for predicting the efficacy of designed toehold switches based on properties learned from ∼180 experimentally tested switches. Availability and implementation: The toehold switch web tool is available at https://yiplab.cse.cuhk.edu.hk/toehold/. Andrew Ching-Yuet To, David Ho-Ting Chu, Angela Ruoning Wang, Frances Cheuk-Yau Li, Alan Wai-On Chiu, Daisy Yuwei Gao, Chung Hang Jonathan Choi, Siu-Kai Kong, Ting-Fung Chan, King-Ming Chan, Kevin Y. Yip |
Bioinform. | 7 |