Graph neural network (GNN) inference faces significant bottlenecks in preprocessing, which often dominate overall inference latency. We introduce AutoGNN, an FPGA-based accelerator designed to address these challenges by leveraging FPGA's reconfigurability and specialized components. AutoGNN adapts to diverse graph inputs, efficiently performing computationally intensive tasks such as graph conversion and sampling. By utilizing components like adder trees, AutoGNN executes reduction operations in constant time, overcoming the limitations of serialization and synchronization on GPUs. AutoGNN integrates unified processing elements (UPEs) and single-cycle reducers (SCRs) to streamline GNN preprocessing. UPEs enable scalable parallel processing for edge sorting and unique vertex selection, while SCRs efficiently handle sequential tasks such as pointer array construction and subgraph reindexing. A user-level software framework dynamically profiles graph inputs, determines optimal configurations, and reprograms AutoGNN to handle varying workloads. Implemented on a$7 n \mathrm{m}$enterprise FPGA, AutoGNN achieves up to$9.0 \times$and$2.1 \times$speedup compared to conventional and GPU-accelerated preprocessing systems, respectively, enabling high-performance GNN preprocessing across diverse datasets.

This work introduces a GPU storage expansion solution utilizing CXL, featuring a novel GPU system design with multiple CXL root ports for integrating diverse storage media (DRAMs and/or SSDs). We developed and siliconized a custom CXL controller integrated at the hardware RTL level, achieving two-digit nanosecond roundtrip latency, the first in the field. This study also includes speculative read and deterministic store mechanisms to efficiently manage read and write operations to hide the endpoint's backend media latency variation. Performance evaluations reveal our approach significantly outperforms existing methods, marking a substantial advancement in GPU storage technology.

Processing data in storage is an energy-efficient solution to examine massive datasets. However, a general incarnation of such well-known task-offloading model in a real system is unfortunately unsuccessful due to not only poor performance but also many practical challenges, such as limited processing capabilities and high vulnerabilities at the storage-level. We propose DockerSSD, a fully flexible in-storage processing (ISP) model that can run a variety of applications near flash without their source-level modification. Specifically, it enables lightweight OS-level virtualization in modern SSDs, which allows the storage intelligence to be well harmonized with existing computing environment and makes ISP even faster. Instead of developing a vendor-specific ISP to offload, DockerSSD can reuse existing Docker images, create containers as a self-governing execution object in storage, and process data directly where they are in real-time. To this end, we design a new communication method and virtual firmware that operate together to download Docker images and manage their container execution without a change of the existing storage interface and runtime. We further accelerate ISP and reduce the execution latency by automating container-related network and I/O handling data paths over hardware. Our evaluation shows that DockerSSD is 2.0 × faster than state-of-the-art ISP models for workloads with a high volume of system calls or file accesses. Moreover, it demonstrates a reduction in power and energy consumption by 1.6 × and 2.3 × respectively.

We present GraphTensor, a comprehensive open-source framework that supports efficient parallel neural network processing on large graphs. GraphTensor offers a set of easy-to-use programming primitives that appreciate both graph and neural network execution behaviors from the beginning (graph sampling) to the end (dense data processing). Our framework runs diverse graph neural network (GNN) models in a destination-centric, feature-wise manner, which can significantly shorten training execution times in a GPU. In addition, GraphTensor rearranges multiple GNN kernels based on their system hyperparameters in a self-governing manner, thereby reducing the processing dimensionality and the latencies further. From the end-to-end execution viewpoint, GraphTensor significantly shortens the service-level GNN latency by applying pipeline parallelism for efficient graph dataset preprocessing. Our evaluation shows that GraphTensor exhibits 1.4× better training performance than emerging GNN frameworks under the execution of large-scale, real-world graph workloads. For the end-to-end services, GraphTensor reduces training latencies of an advanced version of the GNN frameworks (optimized for multi-threaded graph sampling) by 2.4×, on average.

Demonstration Video Link: https://www.youtube.com/watch?v=b5fZBESH1TM

We investigate runtime environment characteristics and explore the challenges of conventional in-memory graph processing. This system-level analysis includes empirical results and observations, which are opposite to the existing expectations of graph application users. Specifically, since raw graph data are not the same as the in-memory graph data, processing a billion-scale graph exhausts all system resources and makes the target system unavailable due to out-of-memory at runtime.To address a lack of memory space problem for big-scale graph analysis, we configure real persistent memory devices (PMEMs) with different operation modes and system software frameworks. In this work, we introduce PMEM to a representative in-memory graph system, Ligra, and perform an in-depth analysis uncovering the performance behaviors of different PMEM-applied in-memory graph systems. Based on our observations, we modify Ligra to improve the graph processing performance with a solid level of data persistence. Our evaluation results reveal that Ligra, with our simple modification, exhibits 4.41× and 3.01× better performance than the original Ligra running on a virtual memory expansion and conventional persistent memory, respectively.

Large persistent memories such as NVDIMM have been perceived as a disruptive memory technology, because they can maintain the state of a system even after a power failure and allow the system to recover quickly. However, overheads incurred by a heavy software-stack intervention seriously negate the benefits of such memories. First, to significantly reduce the software stack overheads, we propose HAMS, a hardware auto-mated Memory-over-Storage (MoS) solution. Specifically, HAMS aggregates the capacity of NVDIMM and ultra-low latency flash archives (ULL-Flash) into a single large memory space, which can be used as a working memory expansion or persistent memory expansion, in an OS-transparent manner. HAMS resides in the memory controller hub and manages its MoS address pool over conventional DDR and NVMe interfaces; it employs a simple hardware cache to serve all the memory requests from the host MMU after mapping the storage space of ULL-Flash to the memory space of NVDIMM. Second, to make HAMS more energy-efficient and reliable, we propose an "advanced HAMS" which removes unnecessary data transfers between NVDIMM and ULL-Flash after optimizing the datapath and hardware modules of HAMS. This approach unleashes the ULL-Flash and its NVMe controller from the storage box and directly connects the HAMS datapath to NVDIMM over the conventional DDR4 interface. Our evaluations show that HAMS and advanced HAMS can offer 97% and 119% higher system performance than a software-based NVDIMM design, while costing 41% and 45% lower energy, respectively.

SSDs become a major storage component in modern memory hierarchies, and SSD research demands exploring future simulation-based studies by integrating SSD subsystems into a full-system environment. However, several challenges exist to model SSDs under a full-system simulations; SSDs are composed upon their own complete system and architecture, which employ all necessary hardware, such as CPUs, DRAM and interconnect network. Employing the hardware components, SSDs also require to have multiple device controllers, internal caches and software modules that respect a wide spectrum of storage interfaces and protocols. These SSD hardware and software are all necessary to incarnate storage subsystems under full-system environment, which can operate in parallel with the host system. In this work, we introduce a new SSD simulation framework, SimpleSSD 2.0, namely Amber, that models embedded CPU cores, DRAMs, and various flash technologies (within an SSD), and operate under the full system simulation environment by enabling a data transfer emulation. Amber also includes full firmware stack, including DRAM cache logic, flash firmware, such as FTL and HIL, and obey diverse standard protocols by revising the host DMA engines and system buses of a popular full system simulator's all functional and timing CPU models (gem5). The proposed simulator can capture the details of dynamic performance and power of embedded cores, DRAMs, firmware and flash under the executions of various OS systems and hardware platforms. Using Amber, we characterize several system-level challenges by simulating different types of full-systems, such as mobile devices and general-purpose computers, and offer comprehensive analyses by comparing passive storage and active storage architectures.