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Erin E. Gill

dblp:226/8457 · DBLP profile ↗
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1ranked-venue papers
0as first author
0since 2021 · last 2018
0000-0002-4943-610XORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › network bioinformatics › biological network analysis
integrated network analysis
0.312018
MetaBridge: enabling network-based integrative analysis via direct protein interactors of metabolites · Bioinform. 2018
Bioinformatics and computational biology
metabolomics
0.312018
MetaBridge: enabling network-based integrative analysis via direct protein interactors of metabolites · Bioinform. 2018
Bioinformatics and computational biology
multi-omics data integration
0.312018
MetaBridge: enabling network-based integrative analysis via direct protein interactors of metabolites · Bioinform. 2018
YearPublicationVenuePosition
2018 MetaBridge: enabling network-based integrative analysis via direct protein interactors of metabolites
abstract
Summary: Here, we present MetaBridge, a tool that collates protein interactors (curated metabolite-enzyme interactions) that influence the levels of specific metabolites including both biosynthetic and degradative enzymes. This enables network-based integrative analysis of metabolomics data with other omics data types. MetaBridge is designed to complement a systems-biology approach to analysis, pairing well with network analysis tools such as NetworkAnalyst.ca, but can be used in any bioinformatics workflow. Availability and implementation: MetaBridge has been implemented as a web tool at https://www.metabridge.org, and the source code is available at https://github.com/samhinshaw/metabridge_shiny (GNU GPLv3).
Samuel J. Hinshaw, Amy H. Y. Lee, Erin E. Gill, Robert E. W. Hancock
Bioinform.3