Stanley M. Huff

dblp:24/2517 · also Stan Huff 0001 · DBLP profile ↗
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55ranked-venue papers
5as first author
5since 2021 · last 2024
0000-0001-8595-2665ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 55 · 5 first-author · 5 since 2021
YearPublicationVenuePosition
2024 The Business Process Management for Healthcare (BPM+ Health) Consortium: motivation, methodology, and deliverables for enabling clinical knowledge interoperability (CKI)
abstract
OBJECTIVES: To enhance the Business Process Management (BPM)+ Healthcare language portfolio by incorporating knowledge types not previously covered and to improve the overall effectiveness and expressiveness of the suite to improve Clinical Knowledge Interoperability. METHODS: We used the BPM+ Health and Object Management Group (OMG) standards development methodology to develop new languages, following a gap analysis between existing BPM+ Health languages and clinical practice guideline knowledge types. Proposal requests were developed based on these requirements, and submission teams were formed to respond to them. The resulting proposals were submitted to OMG for ratification. RESULTS: The BPM+ Health family of languages, which initially consisted of the Business Process Model and Notation, Decision Model and Notation, and Case Model and Notation, was expanded by adding 5 new language standards through the OMG. These include Pedigree and Provenance Model and Notation for expressing epistemic knowledge, Knowledge Package Model and Notation for supporting packaging knowledge, Shared Data Model and Notation for expressing ontic knowledge, Party Model and Notation for representing entities and organizations, and Specification Common Elements, a language providing a standard abstract and reusable library that underpins the 4 new languages. DISCUSSION AND CONCLUSION: In this effort, we adopted a strategy of separation of concerns to promote a portfolio of domain-agnostic, independent, but integrated domain-specific languages for authoring medical knowledge. This strategy is a practical and effective approach to expressing complex medical knowledge. These new domain-specific languages offer various knowledge-type options for clinical knowledge authors to choose from without potentially adding unnecessary overhead or complexity.
Robert F. Lario, Richard Soley, Stephen White, John Butler, Guilherme Del Fiol, Karen Eilbeck, Stanley M. Huff, Kensaku Kawamoto
J. Am. Medical Informatics Assoc.7
2023 A method for structuring complex clinical knowledge and its representational formalisms to support composite knowledge interoperability in healthcare
abstract
INTRODUCTION: The use and interoperability of clinical knowledge starts with the quality of the formalism utilized to express medical expertise. However, a crucial challenge is that existing formalisms are often suboptimal, lacking the fidelity to represent complex knowledge thoroughly and concisely. Often this leads to difficulties when seeking to unambiguously capture, share, and implement the knowledge for care improvement in clinical information systems used by providers and patients. OBJECTIVES: To provide a systematic method to address some of the complexities of knowledge composition and interoperability related to standards-based representational formalisms of medical knowledge. METHODS: Several cross-industry (Healthcare, Linguistics, System Engineering, Standards Development, and Knowledge Engineering) frameworks were synthesized into a proposed reference knowledge framework. The framework utilizes IEEE 42010, the MetaObject Facility, the Semantic Triangle, an Ontology Framework, and the Domain and Comprehensibility Appropriateness criteria. The steps taken were: 1) identify foundational cross-industry frameworks, 2) select architecture description method, 3) define life cycle viewpoints, 4) define representation and knowledge viewpoints, 5) define relationships between neighboring viewpoints, and 6) establish characteristic definitions of the relationships between components. System engineering principles applied included separation of concerns, cohesion, and loose coupling. RESULTS: A "Multilayer Metamodel for Representation and Knowledge" (M*R/K) reference framework was defined. It provides a standard vocabulary for organizing and articulating medical knowledge curation perspectives, concepts, and relationships across the artifacts created during the life cycle of language creation, authoring medical knowledge, and knowledge implementation in clinical information systems such as electronic health records (EHR). CONCLUSION: M*R/K provides a systematic means to address some of the complexities of knowledge composition and interoperability related to medical knowledge representations used in diverse standards. The framework may be used to guide the development, assessment, and coordinated use of knowledge representation formalisms. M*R/K could promote the alignment and aggregated use of distinct domain-specific languages in composite knowledge artifacts such as clinical practice guidelines (CPGs).
Robert F. Lario, Kensaku Kawamoto, Davide Sottara, Karen Eilbeck, Stanley M. Huff, Guilherme Del Fiol, Richard Soley, Blackford Middleton
J. Biomed. Informatics5
2022 Computer clinical decision support that automates personalized clinical care: a challenging but needed healthcare delivery strategy
abstract
How to deliver best care in various clinical settings remains a vexing problem. All pertinent healthcare-related questions have not, cannot, and will not be addressable with costly time- and resource-consuming controlled clinical trials. At present, evidence-based guidelines can address only a small fraction of the types of care that clinicians deliver. Furthermore, underserved areas rarely can access state-of-the-art evidence-based guidelines in real-time, and often lack the wherewithal to implement advanced guidelines. Care providers in such settings frequently do not have sufficient training to undertake advanced guideline implementation. Nevertheless, in advanced modern healthcare delivery environments, use of eActions (validated clinical decision support systems) could help overcome the cognitive limitations of overburdened clinicians. Widespread use of eActions will require surmounting current healthcare technical and cultural barriers and installing clinical evidence/data curation systems. The authors expect that increased numbers of evidence-based guidelines will result from future comparative effectiveness clinical research carried out during routine healthcare delivery within learning healthcare systems.
Alan H. Morris, Christopher Horvat, Brian Stagg, David W. Grainger, Michael Lanspa, James Orme, Terry P. Clemmer, Lindell K. Weaver, Frank Thomas, Colin K. Grissom, Ellie Hirshberg, Thomas D. East, Carrie Jane Wallace, Michael P. Young, Dean F. Sittig, Mary Suchyta, James E. Pearl, Antinio Pesenti, Michela Bombino, Eduardo Beck, Katherine A. Sward, Charlene R. Weir, Shobha Phansalkar, Gordon R. Bernard, B. Taylor Thompson, Roy Brower, Jonathon D. Truwit, Jay S. Steingrub, R. Duncan Hite, Douglas F. Willson, Jerry J. Zimmerman, Vinay Nadkarni, Adrienne G. Randolph, Martha A. Q. Curley, Christopher J. L. Newth, Jacques Lacroix, Michael S. D. Agus, Kang Hoe Lee, Bennett P. deBoisblanc, Frederick Alan Moore, R. Scott Evans, Dean K. Sorenson, Anthony Wong, Michael V. Boland, Willard H. Dere, Alan S. Crandall, Julio C. Facelli, Stanley M. Huff, Peter J. Haug, Ulrike Pielmeier, Stephen Edward Rees, Dan S. Karbing, Steen Andreassen, Eddy Fan, Roberta M. Goldring, Kenneth I. Berger, Beno W. Oppenheimer, Eugene Wesley Ely, Brian W. Pickering, David A. Schoenfeld, Irena Tocino, Russell S. Gonnering, Peter J. Pronovost, Lucy A. Savitz, Didier Dreyfuss, Arthur S. Slutsky, James D. Crapo, Michael R. Pinsky, Brent James, Donald M. Berwick
J. Am. Medical Informatics Assoc.48
2021 Interoperable genetic lab test reports: mapping key data elements to HL7 FHIR specifications and professional reporting guidelines
abstract
OBJECTIVE: In many cases, genetic testing labs provide their test reports as portable document format files or scanned images, which limits the availability of the contained information to advanced informatics solutions, such as automated clinical decision support systems. One of the promising standards that aims to address this limitation is Health Level Seven International (HL7) Fast Healthcare Interoperability Resources Clinical Genomics Implementation Guide-Release 1 (FHIR CG IG STU1). This study aims to identify various data content of some genetic lab test reports and map them to FHIR CG IG specification to assess its coverage and to provide some suggestions for standard development and implementation. MATERIALS AND METHODS: We analyzed sample reports of 4 genetic tests and relevant professional reporting guidelines to identify their key data elements (KDEs) that were then mapped to FHIR CG IG. RESULTS: We identified 36 common KDEs among the analyzed genetic test reports, in addition to other unique KDEs for each genetic test. Relevant suggestions were made to guide the standard implementation and development. DISCUSSION AND CONCLUSION: The FHIR CG IG covers the majority of the identified KDEs. However, we suggested some FHIR extensions that might better represent some KDEs. These extensions may be relevant to FHIR implementations or future FHIR updates.The FHIR CG IG is an excellent step toward the interoperability of genetic lab test reports. However, it is a work-in-progress that needs informative and continuous input from the clinical genetics' community, specifically professional organizations, systems implementers, and genetic knowledgebase providers.
Aly Khalifa, Clinton C. Mason, Jennifer H. Garvin, Marc S. Williams, Guilherme Del Fiol, Brian R. Jackson, Steven B. Bleyl, Gil Alterovitz, Stanley M. Huff
J. Am. Medical Informatics Assoc.9
2021 Enabling a learning healthcare system with automated computer protocols that produce replicable and personalized clinician actions
abstract
Clinical decision-making is based on knowledge, expertise, and authority, with clinicians approving almost every intervention-the starting point for delivery of "All the right care, but only the right care," an unachieved healthcare quality improvement goal. Unaided clinicians suffer from human cognitive limitations and biases when decisions are based only on their training, expertise, and experience. Electronic health records (EHRs) could improve healthcare with robust decision-support tools that reduce unwarranted variation of clinician decisions and actions. Current EHRs, focused on results review, documentation, and accounting, are awkward, time-consuming, and contribute to clinician stress and burnout. Decision-support tools could reduce clinician burden and enable replicable clinician decisions and actions that personalize patient care. Most current clinical decision-support tools or aids lack detail and neither reduce burden nor enable replicable actions. Clinicians must provide subjective interpretation and missing logic, thus introducing personal biases and mindless, unwarranted, variation from evidence-based practice. Replicability occurs when different clinicians, with the same patient information and context, come to the same decision and action. We propose a feasible subset of therapeutic decision-support tools based on credible clinical outcome evidence: computer protocols leading to replicable clinician actions (eActions). eActions enable different clinicians to make consistent decisions and actions when faced with the same patient input data. eActions embrace good everyday decision-making informed by evidence, experience, EHR data, and individual patient status. eActions can reduce unwarranted variation, increase quality of clinical care and research, reduce EHR noise, and could enable a learning healthcare system.
Alan H. Morris, Brian Stagg, Michael Lanspa, James Orme, Terry P. Clemmer, Lindell K. Weaver, Frank Thomas, Colin K. Grissom, Ellie Hirshberg, Thomas D. East, Carrie Jane Wallace, Michael P. Young, Dean F. Sittig, Antonio Pesenti, Michela Bombino, Eduardo Beck, Katherine A. Sward, Charlene R. Weir, Shobha S. Phansalkar, Gordon R. Bernard, B. Taylor Thompson, Roy Brower, Jonathon D. Truwit, Jay S. Steingrub, R. Duncan Hite, Douglas F. Willson, Jerry J. Zimmerman, Vinay M. Nadkarni, Adrienne Randolph, Martha A. Q. Curley, Christopher J. L. Newth, Jacques Lacroix, Michael S. D. Agus, Kang H. Lee, Bennett P. deBoisblanc, R. Scott Evans, Dean K. Sorenson, Anthony Wong, Michael V. Boland, David W. Grainger, Willard H. Dere, Alan S. Crandall, Julio C. Facelli, Stanley M. Huff, Peter J. Haug, Ulrike Pielmeier, Stephen Edward Rees, Dan S. Karbing, Steen Andreassen, Eddy Fan, Roberta M. Goldring, Kenneth I. Berger, Beno W. Oppenheimer, Eugene Wesley Ely, Ognjen Gajic, Brian W. Pickering, David A. Schoenfeld, Irena Tocino, Russell S. Gonnering, Peter J. Pronovost, Lucy A. Savitz, Didier Dreyfuss, Arthur S. Slutsky, James D. Crapo, Derek C. Angus, Michael R. Pinsky, Brent James, Donald M. Berwick
J. Am. Medical Informatics Assoc.44
2020 Utilization of BPM+ Health for the Representation of Clinical Knowledge: A Framework for the Expression and Assessment of Clinical Practice Guidelines (CPG) Utilizing Existing and Emerging Object Management Group (OMG) Standards
Robert F. Lario, Steve Hasely, Stephen White, Karen Eilbeck, Richard Soley, Stanley M. Huff, Kensaku Kawamoto
AMIA6
2018 Data Standardization in Cancer: Challenges and Opportunities
Rimma Belenkaya, Walter S. Campbell, Michael J. Gurley, Stanley M. Huff, Gurvaneet Randhawa, Christian G. Reich, Mitra Rocca
AMIA5
2018 Promoting national and international standards to build interoperable clinical applications
Peter J. Haug, Scott P. Narus, Joseph Bledsoe, Stanley M. Huff
AMIA4
2018 The Healthcare Services Platform Consortium: building a marketplace for healthcare applications
Kenneth S. Rubin, Peter J. Haug, Stanley M. Huff, Steve Hasley, Rick Freeman
AMIA3
2017 Can the Clinical Information Modeling Initiative (CIMI) Enable the Semantic Interoperability Promise of Fast Healthcare Interoperability Resources (FHIR®©)?
Stanley M. Huff, Claude J. Nanjo, Julia L. Skapik
AMIA1
2016 Innovations in Interoperability & Standards Implementation: HL7 FHIR & the Argonaut Project
Charles Jaffe, Stanley M. Huff, Micky Tripathi, Joshua C. Mandel, William Edward Hammond
AMIA2
2016 Profiling Fast Healthcare Interoperability Resources (FHIR) of Family Health History based on the Clinical Element Models
Jaehoon Lee 0003, Nathan C. Hulse, Grant M. Wood, Thomas A. Oniki, Stanley M. Huff
AMIA5
2016 Clinical element models in the SHARPn consortium
abstract
OBJECTIVE: The objective of the Strategic Health IT Advanced Research Project area four (SHARPn) was to develop open-source tools that could be used for the normalization of electronic health record (EHR) data for secondary use--specifically, for high throughput phenotyping. We describe the role of Intermountain Healthcare's Clinical Element Models ([CEMs] Intermountain Healthcare Health Services, Inc, Salt Lake City, Utah) as normalization "targets" within the project. MATERIALS AND METHODS: Intermountain's CEMs were either repurposed or created for the SHARPn project. A CEM describes "valid" structure and semantics for a particular kind of clinical data. CEMs are expressed in a computable syntax that can be compiled into implementation artifacts. The modeling team and SHARPn colleagues agilely gathered requirements and developed and refined models. RESULTS: Twenty-eight "statement" models (analogous to "classes") and numerous "component" CEMs and their associated terminology were repurposed or developed to satisfy SHARPn high throughput phenotyping requirements. Model (structural) mappings and terminology (semantic) mappings were also created. Source data instances were normalized to CEM-conformant data and stored in CEM instance databases. A model browser and request site were built to facilitate the development. DISCUSSION: The modeling efforts demonstrated the need to address context differences and granularity choices and highlighted the inevitability of iso-semantic models. The need for content expertise and "intelligent" content tooling was also underscored. We discuss scalability and sustainability expectations for a CEM-based approach and describe the place of CEMs relative to other current efforts. CONCLUSIONS: The SHARPn effort demonstrated the normalization and secondary use of EHR data. CEMs proved capable of capturing data originating from a variety of sources within the normalization pipeline and serving as suitable normalization targets.
Thomas A. Oniki, Ning Zhuo, Calvin E. Beebe, Joseph F. Coyle, Craig G. Parker, Harold R. Solbrig, Kyle Marchant, Vinod Kaggal, Christopher G. Chute, Stanley M. Huff
J. Am. Medical Informatics Assoc.11
2015 The Master Data Element Visualization: A Consolidated View of the EHR Data at Intermountain Healthcare
Jaehoon Lee 0003, Farrant Sakaguchi, Juntin Mundt, Bart B. Dodds, Nicole Hobbs, Katherina Holzhauser, Stanley M. Huff
AMIA7
2015 Are Meaningful Use Requirements Really Meaningful for Medication Use? Experiences from the Field and Future Opportunities
Sarah P. Slight, Eta S. Berner, William L. Galanter, Stanley M. Huff, Bruce L. Lambert, Carole Lannon, Christoph U. Lehmann, Brian McCourt, Michael McNamara, Nir Menachemi, Thomas H. Payne, Stephen Andrew Spooner, Gordon D. Schiff, Tracy Y. Wang, Ayse Akincigil, Stephen Crystal, Stephen P. Fortmann, Meredith L. Vandermeer, David W. Bates
AMIA4
2015 Completing Death Certificates from an EMR: Analysis of a Novel Public-Private Partnership
Jacob S. Tripp, Jeffrey Duncan, Leisa Finch, Stanley M. Huff
AMIA4
2014 Developing a Section Labeler for Clinical Documents
Peter J. Haug, Xinzi Wu, Jeffrey P. Ferraro, Guergana K. Savova, Stanley M. Huff, Christopher G. Chute
AMIA5
2014 A Case Study on Integrating a Genealogy Database into a Consumer-Facing Family Health History Tool
Jaehoon Lee 0003, Nathan C. Hulse, David P. Taylor, Pallavi Ranade-Kharkar, Grant M. Wood, Peter J. Haug, Stanley M. Huff
AMIA7
2014 Smart on FHIR
David McCallie, Joshua C. Mandel, Stanley M. Huff, Kenneth D. Mandl, Isaac S. Kohane
AMIA3
2014 Lessons learned in detailed clinical modeling at Intermountain Healthcare
abstract
BACKGROUND AND OBJECTIVE: Intermountain Healthcare has a long history of using coded terminology and detailed clinical models (DCMs) to govern storage of clinical data to facilitate decision support and semantic interoperability. The latest iteration of DCMs at Intermountain is called the clinical element model (CEM). We describe the lessons learned from our CEM efforts with regard to subjective decisions a modeler frequently needs to make in creating a CEM. We present insights and guidelines, but also describe situations in which use cases conflict with the guidelines. We propose strategies that can help reconcile the conflicts. The hope is that these lessons will be helpful to others who are developing and maintaining DCMs in order to promote sharing and interoperability. METHODS: We have used the Clinical Element Modeling Language (CEML) to author approximately 5000 CEMs. RESULTS: Based on our experience, we have formulated guidelines to lead our modelers through the subjective decisions they need to make when authoring models. Reported here are guidelines regarding precoordination/postcoordination, dividing content between the model and the terminology, modeling logical attributes, and creating iso-semantic models. We place our lessons in context, exploring the potential benefits of an implementation layer, an iso-semantic modeling framework, and ontologic technologies. CONCLUSIONS: We assert that detailed clinical models can advance interoperability and sharing, and that our guidelines, an implementation layer, and an iso-semantic framework will support our progress toward that goal.
Thomas A. Oniki, Joseph F. Coyle, Craig G. Parker, Stanley M. Huff
J. Am. Medical Informatics Assoc.4
2013 Analyzing Data Entry Patterns with a Consumer-Facing Family Health History Tool: An Empirical Study
Jaehoon Lee 0003, Nathan C. Hulse, Pallavi Ranade-Kharkar, Grant M. Wood, Peter J. Haug, Stanley M. Huff
AMIA6
2013 A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data
abstract
The clinical element model (CEM) is an information model designed for representing clinical information in electronic health records (EHR) systems across organizations. The current representation of CEMs does not support formal semantic definitions and therefore it is not possible to perform reasoning and consistency checking on derived models. This paper introduces our efforts to represent the CEM specification using the Web Ontology Language (OWL). The CEM-OWL representation connects the CEM content with the Semantic Web environment, which provides authoring, reasoning, and querying tools. This work may also facilitate the harmonization of the CEMs with domain knowledge represented in terminology models as well as other clinical information models such as the openEHR archetype model. We have created the CEM-OWL meta ontology based on the CEM specification. A convertor has been implemented in Java to automatically translate detailed CEMs from XML to OWL. A panel evaluation has been conducted, and the results show that the OWL modeling can faithfully represent the CEM specification and represent patient data.
Cui Tao, Guoqian Jiang, Thomas A. Oniki, Robert R. Freimuth, Qian Zhu 0003, Deepak K. Sharma, Jyotishman Pathak, Stanley M. Huff, Christopher G. Chute
J. Am. Medical Informatics Assoc.8
2012 Data Modeling for Incorporating Consumer-Entered Family Health History Data into the Electronic Health Record
Jaehoon Lee 0003, Pallavi Ranade-Kharkar, Nathan C. Hulse, Thomas A. Oniki, Grant M. Wood, Jacob S. Tripp, Ning Zhuo, Stanley M. Huff
AMIA8
2012 Modeling and Executing Electronic Health Records Driven Phenotyping Algorithms using the NQF Quality Data Model and JBoss® Drools Engine
Dingcheng Li, Sahana Murthy, Davide Sottara, Christopher G. Chute, Stanley M. Huff, Jyotishman Pathak, Cory M. Endle, Dale Suesse, Craig Stancle
AMIA5
2012 Towards a semantic lexicon for clinical natural language processing
Stephen T. Wu, Dingcheng Li, Siddhartha Jonnalagadda, Sunghwan Sohn, Kavishwar B. Wagholikar, Peter J. Haug, Stanley M. Huff, Christopher G. Chute
AMIA8
2012 HDD Terminology and Information Model Browsing Tools
Senthil K. Nachimuthu, Susan Matney, Mark G. Weiner, John H. Holmes, Stanley M. Huff, Lee Min Lau
AMIA5
2012 Lessons Learned in Detailed Clinical Modeling at Intermountain Healthcare
Thomas A. Oniki, Craig G. Parker, Joseph F. Coyle, Stanley M. Huff
AMIA4
2012 Auditing consistency and usefulness of LOINC use among three large institutions - Using version spaces for grouping LOINC codes
M. C. Lin, Daniel J. Vreeman, Clement J. McDonald, Stanley M. Huff
J. Biomed. Informatics4
2012 Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project
Susan Rea, Jyotishman Pathak, Guergana K. Savova, Thomas A. Oniki, Les Westberg, Calvin E. Beebe, Cui Tao, Craig G. Parker, Peter J. Haug, Stanley M. Huff, Christopher G. Chute
J. Biomed. Informatics10
2010 Application of information technology: Development of an electronic public health case report using HL7 v2.5 to meet public health needs
abstract
Clinicians are required to report selected conditions to public health authorities within a stipulated amount of time. The current reporting process is mostly paper-based and inefficient and may lead to delays in case investigation. As electronic medical records become more prevalent, electronic case reporting is becoming increasingly feasible. However, there is no existing standard for the electronic transmission of case reports from healthcare to public health entities. We identified the major requirements of electronic case reports and verified that the requirements support the work processes of the local health departments. We propose an extendable standards-based model to electronically transmit case information and associated laboratory information from healthcare to public health entities. The HL7 v2.5 message model is currently being implemented to transmit electronic case reports from Intermountain Healthcare to the Utah Department of Health.
Deepthi Rajeev, Catherine J. Staes, R. Scott Evans, Susan Mottice, Robert T. Rolfs, Matthew H. Samore, Jon Whitney, Richard Kurzban, Stanley M. Huff
J. Am. Medical Informatics Assoc.9
2010 Letter: In response to letter to the editor: 'Concerning SNOMED-CT content for public health case reports'
abstract
We are grateful for the careful review of our article by Wilcke et al.1 We would like to reaffirm our belief that SNOMED CT is an extremely useful terminology and the best current choice for the representation of clinical findings generally, and specifically for the representation of findings in public health case reports. The broad use of SNOMED CT will lead to the understanding of important modeling issues as well as improved SNOMED CT content. We appreciate the respondents' clarification that ‘porcine enteric adenomatosis’ is a species-independent disorder. However, the fact that we held this erroneous opinion is understandable. As ‘Porcine’ is in the name of the term, and without further explanation, the ‘true’ meaning is difficult to discern. The name of the term is ambiguous, if not outright misleading. This situation points to the underlying difficulty of making it easy for users to understand the meaning of concepts in reference terminologies. Great emphasis has been placed on the accuracy and internal consistency of reference terminologies, with less emphasis on what is needed to make the content easily understood by clinical users and researchers. Human readable definitions would be a big help. We agree with the respondents that, ‘Information regarding species, whether it be human or non-human can and should be identified by the information model, not the terminology.’ We are aware of the ongoing efforts to form a working relationship between creators of information models and terminology developers so that models and terminology can be created in unison, thereby removing ambiguity in data representation. We applaud and support these efforts. We absolutely agree that, ‘Balancing the needs of practical applications with the importance of the purity and accuracy of the terminology is a very difficult task….’ We would actually state that it is impossible. We would assert that hierarchies are created for a purpose. The purpose could be to support automated maintenance of the terminology, to create definitional relationships, or to allow appropriate inferences. If the different users of the terminology have different purposes, it is not always possible to meet all needs with a single hierarchy, no matter how much care is taken. Even with the clarifications offered by the respondents, the fact remains that the hierarchical relationships represented in SNOMED CT do not ideally support public health reporting use cases. The desired case roll-up behavior is not supported by the unmodified SNOMED CT hierarchies and concepts. While we asked for the development of a hierarchy that is exclusively for human conditions, a better statement of the need would have been the development of a hierarchy that is valid for public health inferencing about human disease. The problem is not with SNOMED CT per se. The root of the problem is that all purposes cannot be met by a single hierarchy. We need to support many purpose-specific hierarchies. To this end, we support the respondents' suggestion for increasing creation of subsets. We look forward to learning more about how subsets can be created and exchanged to meet specific clinical needs. None. This study was conducted with the approval of the University of Utah. Not commissioned; not externally peer reviewed.
Deepthi Rajeev, Catherine J. Staes, R. Scott Evans, Susan Mottice, Robert T. Rolfs, Matthew H. Samore, Jon Whitney, Richard Kurzban, Stanley M. Huff
J. Am. Medical Informatics Assoc.9
2009 Evaluation of LOINC for Representing Constitutional Cytogenetic Test Result Reports
Yan Z. Heras, Joyce A. Mitchell, Marc S. Williams, Arthur R. Brothman, Stanley M. Huff
AMIA5
2008 Application of Information Technology: Computerized Alerts Improve Outpatient Laboratory Monitoring of Transplant Patients
abstract
Authors evaluated the impact of computerized alerts on the quality of outpatient laboratory monitoring for transplant patients. For 356 outpatient liver transplant patients managed at LDS Hospital, Salt Lake City, this observational study compared traditional laboratory result reporting, using faxes and printouts, to computerized alerts implemented in 2004. Study alerts within the electronic health record notified clinicians of new results and overdue new orders for creatinine tests and immunosuppression drug levels. After implementing alerts, completeness of reporting increased from 66 to >99 %, as did positive predictive value that a report included new information (from 46 to >99 %). Timeliness of reporting and clinicians' responses improved after implementing alerts (p <0.001): median times for clinicians to receive and complete actions decreased to 9 hours from 33 hours using the prior traditional reporting system. Computerized alerts led to more efficient, complete, and timely management of laboratory information.
Catherine J. Staes, R. Scott Evans, Beatriz H. S. C. Rocha, John B. Sorensen, Stanley M. Huff, Joan Arata, Scott P. Narus
J. Am. Medical Informatics Assoc.5
2008 Case Report: Evaluating the Accuracy of Existing EMR Data as Predictors of Follow-up Providers
abstract
In order to evaluate the accuracy of existing EMR data in predicting follow-up providers, a retrospective analysis was performed on six months of data for inpatient and ED encounters occurring at two hospitals, and on related outpatient data. Sensitivity and Positive Predictive Value (PPV) were calculated for each of eight predictors, to determine their effectiveness in predicting follow-up providers. Our findings indicate that access to longitudinal patient care records can improve prediction of which providers a patient is likely to see post-discharge compared to simply using Primary Care Provider data from admissions records. Of the predictors evaluated, a patient's past appointment history was the best predictor of which providers they would see in the future (PPV = 48% following inpatient visits, 35% following emergency department visits). However, even the best performing predictors failed to predict more than half of the follow-up providers and might generate many "false" alerts.
Jacob S. Tripp, Scott P. Narus, Michael K. Magill, Stanley M. Huff
J. Am. Medical Informatics Assoc.4
2006 Technical Brief: A Case for Manual Entry of Structured, Coded Laboratory Data from Multiple Sources into an Ambulatory Electronic Health Record
abstract
Laboratory results provide necessary information for the management of ambulatory patients. To realize the benefits of an electronic health record (EHR) and coded laboratory data (e.g., decision support and improved data access and display), results from laboratories that are external to the health care enterprise need to be integrated with internal results. We describe the development and clinical impact of integrating external results into the EHR at Intermountain Health Care (IHC). During 2004, over 14,000 external laboratory results for 128 liver transplant patients were added to the EHR. The results were used to generate computerized alerts that assisted clinicians with managing laboratory tests in the ambulatory setting. The external results were sent from 85 different facilities and can now be viewed in the EHR integrated with IHC results. We encountered regulatory, logistic, economic, and data quality issues that should be of interest to others developing similar applications.
Catherine J. Staes, Sterling T. Bennett, R. Scott Evans, Scott P. Narus, Stanley M. Huff, John B. Sorensen
J. Am. Medical Informatics Assoc.5
2005 Physician use of electronic medical records: Issues and successes with direct data entry and physician productivity
Paul D. Clayton, Scott P. Narus, Watson A. Bowes III, Tammy S. Madsen, Adam B. Wilcox, Garth Orsmond, Beatriz H. S. C. Rocha, Sidney N. Thornton, Spencer S. Jones, Craig A. Jacobsen, Mark Udall, Michael L. Rhodes, Brent E. Wallace, Wayne Cannon, Jerry Gardner, Stanley M. Huff, Linda Leckman
AMIA16
2005 Model Formulation: Development of an Information Model for Storing Organ Donor Data Within an Electronic Medical Record
abstract
OBJECTIVE: To develop a model to store information in an electronic medical record (EMR) for the management of transplant patients. The model for storing donor information must be designed to allow clinicians to access donor information from the transplant recipient's record and to allow donor data to be stored without needlessly proliferating new Logical Observation Identifier Names and Codes (LOINC) codes for already-coded laboratory tests. DESIGN: Information required to manage transplant patients requires the use of a donor's medical information while caring for the transplant patient. Three strategies were considered: (1) link the transplant patient's EMR to the donor's EMR; (2) use pre-coordinated observation identifiers (i.e., LOINC codes with *(wedge)DONOR specified in the system axes) to identify donor data stored in the transplant patient's EMR; and (3) use an information model that allows donor information to be stored in the transplant patient's record by allowing the "source" of the data (donor) and the "name" of the result (e.g., blood type) to be post-coordinated in the transplant patient's EMR. RESULTS: We selected the third strategy and implemented a flexible post-coordinated information model. There was no need to create new LOINC codes for already-coded laboratory tests. The model required that the data structure in the EMR allow for the storage of the "subject" of the test. CONCLUSION: The selected strategy met our design requirements and provided an extendable information model to store donor data. This model can be used whenever it is necessary to refer to one patient's data from another patient's EMR.
Catherine J. Staes, Stanley M. Huff, R. Scott Evans, Scott P. Narus, Cyndalynn Tilley, John B. Sorensen
J. Am. Medical Informatics Assoc.2
2003 Development of an Information Model for Solid Organ Transplantation
Catherine J. Staes, Stanley M. Huff, Cyndalynn Tilley, Scott P. Narus, John B. Sorensen, R. Scott Evans
AMIA2
2003 The Design and Implementation of a Picklist Authoring Tool
Ning Zhuo, Roberto A. Rocha, Stanley M. Huff
AMIA3
2003 Representing nursing assessments in clinical information systems using the logical observation identifiers, names, and codes database
Susan Matney, Suzanne Bakken, Stanley M. Huff
J. Biomed. Informatics3
2002 Standards-based Sharable Active Guideline Environment (SAGE): A Project to Develop a Universal Framework for Encoding and Disseminating Electronic Clinical Practice Guidelines
Nick Beard, James R. Campbell 0001, Stanley M. Huff, Mauricio Leon, James G. Mansfield, Eric Mays, James C. McClay, David N. Mohr, Mark A. Musen, David O'Brien, Roberto A. Rocha, Anne Saulovich, Sidna M. Tulledge-Scheitel, Samson W. Tu
AMIA3
2000 A method for the automated mapping of laboratory results to LOINC
Lee Min Lau, Kate Johnson, Kent Monson, Siew Hong Lam, Stanley M. Huff
AMIA5
2000 Issues Encountered While Standardizing Diagnostic Imaging Procedures of Multiple Healthcare Institutions Using LOINC Format
Patricia S. Wilson, Lee Min Lau, Stanley M. Huff
AMIA3
2000 White Paper: Toward Vocabulary Domain Specifications for Health Level 7 - coded Data Elements
abstract
The "vocabulary problem" has long plagued the developers, implementers, and users of computer-based systems. The authors review selected activities of the Health Level 7 (HL7) Vocabulary Technical Committee that are related to vocabulary domain specification for HL7 coded data elements. These activities include: 1) the development of two sets of principles to provide guidance to terminology stakeholders, including organizations seeking to deploy HL7-compliant systems, terminology developers, and terminology integrators; 2) the completion of a survey of terminology developers; 3) the development of a process for HL7 registration of terminologies; and 4) the maintenance of vocabulary domain specification tables. As background, vocabulary domain specification is defined and the relationship between the HL7 Reference Information Model and vocabulary domain specification is described. The activities of the Vocabulary Technical Committee complement the efforts of terminology developers and other stakeholders. These activities are aimed at realizing semantic interoperability in the context of the HL7 Message Development Framework, so that information exchange and use among disparate systems can occur for the delivery and management of direct clinical care as well as for purposes such as clinical research, outcome research, and population health management.
Suzanne Bakken, Keith E. Campbell, James J. Cimino, Stanley M. Huff, William Edward Hammond
J. Am. Medical Informatics Assoc.4
2000 Research Paper: Evaluation of the Clinical LOINC (Logical Observation Identifiers, Names, and Codes) Semantic Structure as a Terminology Model for Standardized Assessment Measures
abstract
OBJECTIVE: The purpose of this study was to test the adequacy of the Clinical LOINC (Logical Observation Identifiers, Names, and Codes) semantic structure as a terminology model for standardized assessment measures. METHODS: After extension of the definitions, 1, 096 items from 35 standardized assessment instruments were dissected into the elements of the Clinical LOINC semantic structure. An additional coder dissected at least one randomly selected item from each instrument. When multiple scale types occurred in a single instrument, a second coder dissected one randomly selected item representative of each scale type. RESULTS: The results support the adequacy of the Clinical LOINC semantic structure as a terminology model for standardized assessments. Using the revised definitions, the coders were able to dissect into the elements of Clinical LOINC all the standardized assessment items in the sample instruments. Percentage agreement for each element was as follows: component, 100 percent; property, 87.8 percent; timing, 82.9 percent; system/sample, 100 percent; scale, 92.6 percent; and method, 97.6 percent. DISCUSSION: This evaluation was an initial step toward the representation of standardized assessment items in a manner that facilitates data sharing and re-use. Further clarification of the definitions, especially those related to time and property, is required to improve inter-rater reliability and to harmonize the representations with similar items already in LOINC.
Suzanne Bakken, James J. Cimino, Robert E. Haskell, Rita Kukafka, Cindi Matsumoto, Garrett K. Chan, Stanley M. Huff
J. Am. Medical Informatics Assoc.7
2000 Research Paper: Automated Mapping of Observation Codes Using Extensional Definitions
abstract
OBJECTIVE: To create "extensional definitions" of laboratory codes from derived characteristics of coded values in a clinical database and then use these definitions in the automated mapping of codes between disparate facilities. DESIGN: Repository data for two laboratory facilities in the Intermountain Health Care system were analyzed to create extensional definitions for the local codes of each facility. These definitions were then matched using automated matching software to create mappings between the shared local codes. The results were compared with the mappings of the vocabulary developers. MEASUREMENTS: The number of correct matches and the size of the match group were recorded. A match was considered correct if the corresponding codes from each facility were included in the group. The group size was defined as the total number of codes in the match group (e.g., a one-to-one mapping is a group size of two). RESULTS: Of the matches generated by the automated matching software, 81 percent were correct. The average group size was 2.4. There were a total of 328 possible matches in the data set, and 75 percent of these were correctly identified. CONCLUSIONS: Extensional definitions for local codes created from repository data can be utilized to automatically map codes from disparate systems. This approach, if generalized to other systems, can reduce the effort required to map one system to another while increasing mapping consistency.
Kenneth A. Zollo, Stanley M. Huff
J. Am. Medical Informatics Assoc.2
1999 Viewpoint: The Decline and Fall of Esperanto: Lessons for Standards Committees
abstract
In 1887, Polish physician Ludovic Zamenhof introduced Esperanto, a simple, easy-to-learn planned language. His goal was to erase communication barriers between ethnic groups by providing them with a politically neutral, culturally free standard language. His ideas received both praise and condemnation from the leaders of his time. Interest in Esperanto peaked in the 1970s but has since faded somewhat. Despite the logical concept and intellectual appeal of a standard language, Esperanto has not evolved into a dominant worldwide language. Instead, English, with all its idiosyncrasies, is closest to an international lingua franca. Like Zamenhof, standards committees in medical informatics have recognized communication chaos and have tried to establish working models, with mixed results. In some cases, previously shunned proprietary systems have become the standard. A proposed standard, no matter how simple, logical, and well designed, may have difficulty displacing an imperfect but functional "real life" system.
Robert Patterson, Stanley M. Huff
J. Am. Medical Informatics Assoc.2
1998 Clinical data exchange standards and vocabularies for messages
Stanley M. Huff
AMIA1
1998 A proposal for incorporating health level seven (HL7) vocabulary in the UMLS Metathesaurus
Stanley M. Huff, W. Dean Bidgood Jr., James J. Cimino, William Edward Hammond
AMIA1
1998 Comparing Encounter and Demographics Data Elements among Different Healthcare Enterprises Using a Common Data Dictionary
Lee Min Lau, Siew Hong Lam, Stanley M. Huff
AMIA3
1998 Research Paper: Evaluation of a "Lexically Assign, Logically Refine" Strategy for Semi-automated Integration of Overlapping Terminologies
abstract
OBJECTIVE: To evaluate a "lexically assign, logically refine" (LALR) strategy for merging overlapping healthcare terminologies. This strategy combines description logic classification with lexical techniques that propose initial term definitions. The lexically suggested initial definitions are manually refined by domain experts to yield description logic definitions for each term in the overlapping terminologies of interest. Logic-based techniques are then used to merge defined terms. METHODS: A LALR strategy was applied to 7,763 LOINC and 2,050 SNOMED procedure terms using a common set of defining relationships taken from the LOINC data model. Candidate value restrictions were derived by lexically comparing the procedure's name with other terms contained in the reference SNOMED topography, living organism, function, and chemical axes. These candidate restrictions were reviewed by a domain expert, transformed into terminologic definitions for each of the terms, and then algorithmically classified. RESULTS: The authors successfully defined 5,724 (73%) LOINC and 1,151 (56%) SNOMED procedure terms using a LALR strategy. Algorithmic classification of the defined concepts resulted in an organization mirroring that of the reference hierarchies. The classification techniques appropriately placed more detailed LOINC terms underneath the corresponding SNOMED terms, thus forming a complementary relationship between the LOINC and SNOMED terms. DISCUSSION: LALR is a successful strategy for merging overlapping terminologies in a test case where both terminologies can be defined using the same defining relationships, and where value restrictions can be drawn from a single reference hierarchy. Those concepts not having lexically suggested value restrictions frequently indicate gaps in the reference hierarchy.
Robert H. Dolin, Stanley M. Huff, Roberto A. Rocha, Kent A. Spackman, Keith E. Campbell
J. Am. Medical Informatics Assoc.2
1998 Technical Milestone: Development of the Logical Observation Identifier Names and Codes (LOINC) Vocabulary
abstract
The LOINC (Logical Observation Identifier Names and Codes) vocabulary is a set of more than 10,000 names and codes developed for use as observation identifiers in standardized messages exchanged between clinical computer systems. The goal of the study was to create universal names and codes for clinical observations that could be used by all clinical information systems. The LOINC names are structured to facilitate rapid matching, either automated or manual, between local vocabularies and the universal LOINC codes. If LOINC codes are used in clinical messages, each system participating in data exchange needs to match its local vocabulary to the standard vocabulary only once. This will reduce both the time and cost of implementing standardized interfaces. The history of the development of the LOINC vocabulary and the methodology used in its creation are described.
Stanley M. Huff, Roberto A. Rocha, Clement J. McDonald, Georges De Moor, Tom Fiers, W. Dean Bidgood Jr., Arden W. Forrey, William G. Francis, Wayne R. Tracy, Dennis Leavelle, Frank Stalling, Brian Griffin, Pat Maloney, Diane Leland, Linda Charles, Kathy Hutchins, John Baenziger
J. Am. Medical Informatics Assoc.1
1995 Research Paper: The Canon Group's Effort: Working Toward a Merged Model
abstract
OBJECTIVE: To develop a representational schema for clinical data for use in exchanging data and applications, using a collaborative approach. DESIGN: Representational models for clinical radiology were independently developed manually by several Canon Group members who had diverse application interests, using sample reports. These models were merged into one common model through an iterative process by means of workshops, meetings, and electronic mail. RESULTS: A core merged model for radiologic findings present in a set of reports that subsumed the models that were developed independently. CONCLUSIONS: The Canon Group's modeling effort focused on a collaborative approach to developing a representational schema for clinical concepts, using chest radiography reports as the initial experiment. This effort resulted in a core model that represents a consensus. Further efforts in modeling will extend the representational coverage and will also address issues such as scalability, automation, evaluation, and support of the collaborative effort.
Carol Friedman, Stanley M. Huff, William R. Hersh, Edward Pattison-Gordon, James J. Cimino
J. Am. Medical Informatics Assoc.2
1995 Research Paper: An Event Model of Medical Information Representation
abstract
OBJECTIVE: Develop a model for structured and encoded representation of medical information that supports human review, decision support applications, ad hoc queries, statistical analysis, and natural-language processing. DESIGN: A medical information representation model was developed from manual and semiautomated analysis of patient data. The key assumption of the model is that medical information can be represented as a series of linked events. The event representation has two main components. The first component is a frame or template definition that specifies the attributes of the event. The second component is a structured vocabulary, the terms of which are taken as the values of the slots in the event template structure. Individual event instances are linked by specific named relationships. RESULTS: The proposed model was used to represent a chest-radiograph report. CONCLUSIONS: The event model of medical information representation provides a mechanism for formal definition of the logical structure of medical data and allows explicit time-oriented and associative relationships between event instances.
Stanley M. Huff, Roberto A. Rocha, Bruce E. Bray, Homer R. Warner, Peter J. Haug
J. Am. Medical Informatics Assoc.1
1994 Position Paper: Toward a Medical-concept Representation Language
abstract
The Canon Group is an informal organization of medical informatics researchers who are working on the problem of developing a "deeper" representation formalism for use in exchanging data and developing applications. Individuals in the group represent experts in such areas as knowledge representation and computational linguistics, as well as in a variety of medical subdisciplines. All share the view that current mechanisms for the characterization of medical phenomena are either inadequate (limited or rigid) or idiosyncratic (useful for a specific application but incapable of being generalized or extended). The Group proposes to focus on the design of a general schema for medical-language representation including the specification of the resources and associated procedures required to map language (including standard terminologies) into representations that make all implicit relations "visible," reveal "hidden attributes," and generally resolve ambiguous or vague references. The Group is proceeding by examining large numbers of texts (records) in medical sub-domains to identify candidate "concepts" and by attempting to develop general rules and representations for elements such as attributes and values so that all concepts may be expressed uniformly.
David A. Evans 0001, James J. Cimino, William R. Hersh, Stanley M. Huff, Douglas S. Bell
J. Am. Medical Informatics Assoc.4