Francisco Sahli Costabal

dblp:241/5435 · DBLP profile ↗
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8ranked-venue papers
1as first author
8since 2021 · last 2026
0000-0002-2612-463XORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 5 · 5 since 2021Artificial intelligence and machine learning · 3 · 1 first-author · 3 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 since 2021
YearPublicationVenuePosition
2026 Convolutional neural networks for tsunami intensity measure prediction from slip and coseismic deformation data
Angelica Monserrat Buenrostro, J. G. F. Crempien, Rosita Jünemann, Alejandro Urrutia, Francisco Sahli Costabal, José Delpiano
Eng. Appl. Artif. Intell.5
2026 Optimizing the dynamics of the frequency bias in Fourier features neural networks
Juan Molina, Mircea Petrache, Francisco Sahli Costabal, Matias Courdurier
Neurocomputing3
2026 PISCO: Self-supervised k-space regularization for improved neural implicit k-space representations of dynamic MRI
abstract
Neural implicit k-space representations (NIK) have shown promising results for dynamic magnetic resonance imaging (MRI) at high temporal resolutions. Yet, reducing acquisition time, and thereby available training data, results in severe performance drops due to overfitting. To address this, we introduce a novel self-supervised k-space loss function L PISCO , applicable for regularization of NIK-based reconstructions. The proposed loss function is based on the concept of parallel imaging-inspired self-consistency (PISCO), enforcing a consistent global k-space neighborhood relationship without requiring additional data. Quantitative and qualitative evaluations on static and dynamic MR reconstructions show that integrating PISCO significantly improves NIK representations, making it a competitive dynamic reconstruction method without constraining the temporal resolution. Particularly at high acceleration factors (R ≥ 50), NIK with PISCO can avoid temporal oversmoothing of state-of-the-art methods and achieves superior spatio-temporal reconstruction quality. Furthermore, an extensive analysis of the loss assumptions and stability shows PISCO’s potential as versatile self-supervised k-space loss function for further applications and architectures. Code is available at: https://github.com/compai-lab/2025-pisco-spieker
Veronika Spieker, Hannah Eichhorn, Wenqi Huang 0003, Jonathan K. Stelter, Tabita Catalán, Rickmer Braren, Daniel Rueckert, Francisco Sahli Costabal, Kerstin Hammernik, Dimitrios C. Karampinos, Claudia Prieto, Julia A. Schnabel
Medical Image Anal.8
2025 Probabilistic learning of the Purkinje network from the electrocardiogram
Felipe Álvarez-Barrientos, Mariana Salinas-Camus, Simone Pezzuto, Francisco Sahli Costabal
Medical Image Anal.4
2025 Simulation-free prediction of atrial fibrillation inducibility with the fibrotic kernel signature
Tomás Banduc, Luca Azzolin, Martin Manninger, Daniel Scherr, Gernot Plank, Simone Pezzuto, Francisco Sahli Costabal
Medical Image Anal.7
2024 Self-supervised k-Space Regularization for Motion-Resolved Abdominal MRI Using Neural Implicit k-Space Representations
Veronika Spieker, Hannah Eichhorn, Jonathan K. Stelter, Wenqi Huang 0003, Rickmer Braren, Daniel Rueckert, Francisco Sahli Costabal, Kerstin Hammernik, Claudia Prieto, Dimitrios C. Karampinos, Julia A. Schnabel
MICCAI (7)7
2024 Δ-PINNs: Physics-informed neural networks on complex geometries
Francisco Sahli Costabal, Simone Pezzuto, Paris Perdikaris
Eng. Appl. Artif. Intell.1
2023 WarpPINN: Cine-MR image registration with physics-informed neural networks
abstract
The diagnosis of heart failure usually includes a global functional assessment, such as ejection fraction measured by magnetic resonance imaging. However, these metrics have low discriminate power to distinguish different cardiomyopathies, which may not affect the global function of the heart. Quantifying local deformations in the form of cardiac strain can provide helpful information, but it remains a challenge. In this work, we introduce WarpPINN, a physics-informed neural network to perform image registration to obtain local metrics of heart deformation. We apply this method to cine magnetic resonance images to estimate the motion during the cardiac cycle. We inform our neural network of the near-incompressibility of cardiac tissue by penalizing the Jacobian of the deformation field. The loss function has two components: an intensity-based similarity term between the reference and the warped template images, and a regularizer that represents the hyperelastic behavior of the tissue. The architecture of the neural network allows us to easily compute the strain via automatic differentiation to assess cardiac activity. We use Fourier feature mappings to overcome the spectral bias of neural networks, allowing us to capture discontinuities in the strain field. The algorithm is tested on synthetic examples and on a cine SSFP MRI benchmark of 15 healthy volunteers, where it is trained to learn the deformation mapping of each case. We outperform current methodologies in landmark tracking and provide physiological strain estimations in the radial and circumferential directions. WarpPINN provides precise measurements of local cardiac deformations that can be used for a better diagnosis of heart failure and can be used for general image registration tasks. Source code is available at https://github.com/fsahli/WarpPINN.
Pablo Arratia López, Hernán Mella, Sergio Uribe, Daniel E. Hurtado, Francisco Sahli Costabal
Medical Image Anal.5