Demonstration venue · read-only. Every page can be browsed; the buttons that would change it are switched off. Create an account to run TaxoReview on your own data. A simulation from public publication records: the people listed were not invited and did not agree to review.
? Tutorial for this page

Simon L. Batzner

dblp:241/7204 · DBLP profile ↗
← Back
2ranked-venue papers
0as first author
2since 2021 · last 2024
0000-0002-8826-2712ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 1 · 1 since 2021Systems, architecture and hardware · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
1 paper
Generative modeling · 77% Graph learning · 12% Learning paradigms · 12%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Computational science and engineering · 100%
Computer architecture, parallel and distributed computing, and storage systems
1 paper
GPUs and heterogeneous computing · 50% High-performance computing · 50%

Topics — the 8 heaviest of 9, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Generative modeling › diffusion model
crystal structure generation
0.812024
Generative Hierarchical Materials Search · NeurIPS 2024
Machine learning › Generative modeling
diffusion model
0.812024
Generative Hierarchical Materials Search · NeurIPS 2024
Computational science and engineering › model simulation
atomistic simulation
0.712023
Scaling the Leading Accuracy of Deep Equivariant Models to Biomolecular Simulations of Realistic Size · SC 2023
Computational science and engineering › computational chemistry › molecular simulation
molecular dynamics
0.712023
Scaling the Leading Accuracy of Deep Equivariant Models to Biomolecular Simulations of Realistic Size · SC 2023
Machine learning › Graph learning
graph neural network
0.212024
Generative Hierarchical Materials Search · NeurIPS 2024
Machine learning › Learning paradigms › supervised learning
property prediction
0.212024
Generative Hierarchical Materials Search · NeurIPS 2024
GPUs and heterogeneous computing
GPU computing
0.212023
Scaling the Leading Accuracy of Deep Equivariant Models to Biomolecular Simulations of Realistic Size · SC 2023
High-performance computing
large-scale simulation
0.212023
Scaling the Leading Accuracy of Deep Equivariant Models to Biomolecular Simulations of Realistic Size · SC 2023

Methods — techniques the papers use, named apart from their topics

parallelization · 1.3deep equivariant neural networks · 1.3multi-objective optimization · 0.8forward tree search · 0.8
YearPublicationVenuePosition
2024 Generative Hierarchical Materials Search
abstract
Generative models trained at scale can now produce novel text, video, and more recently, scientific data such as crystal structures. The ultimate goal for materials discovery, however, goes beyond generation: we desire a fully automated system that proposes, generates, and verifies crystal structures given a high-level user instruction. In this work, we formulate end-to-end language-to-structure generation as a multi-objective optimization problem, and propose Generative Hierarchical Materials Search (GenMS) for controllable generation of crystal structures. GenMS consists of (1) a language model that takes high-level natural language as input and generates intermediate textual information about a crystal (e.g., chemical formulae), and (2) a diffusion model that takes intermediate information as input and generates low-level continuous value crystal structures. GenMS additionally uses a graph neural network to predict properties (e.g., formation energy) from the generated crystal structures. During inference, GenMS leverages all three components to conduct a forward tree search over the space of possible structures. Experiments show that GenMS outperforms other alternatives both in satisfying user request and in generating low-energy structures. GenMS is able to generate complex structures such as double perovskites (or elpasolites), layered structures, and spinels, solely from natural language input.
Sherry Yang 0001, Simon L. Batzner, Ruiqi Gao, Muratahan Aykol, Alexander L. Gaunt, Brendan McMorrow, Danilo Jimenez Rezende, Dale Schuurmans, Igor Mordatch, Ekin Dogus Cubuk
NeurIPS2
2023 Scaling the Leading Accuracy of Deep Equivariant Models to Biomolecular Simulations of Realistic Size
abstract
This work brings the leading accuracy, sample efficiency, and robustness of deep equivariant neural networks to the extreme computational scale. This is achieved through a combination of innovative model architecture, massive parallelization, and models and implementations optimized for efficient GPU utilization. The resulting Allegro architecture bridges the accuracy-speed tradeoff of atomistic simulations and enables description of dynamics in structures of unprecedented complexity at quantum fidelity. To illustrate the scalability of Allegro, we perform nanoseconds-long stable simulations of protein dynamics and scale up to a 44-million atom structure of a complete, all-atom, explicitly solvated HIV capsid on the Perlmutter supercomputer. We demonstrate excellent strong scaling up to 100 million atoms and 70% weak scaling to 5120 A100 GPUs.
Boris Kozinsky, Albert Musaelian, Anders Johansson 0011, Simon L. Batzner
SC4