SVM (Support Vector Machine) is a well-established machine learning methodology popularly used for classification, regression, and ranking. Recently SVM has been actively researched for rank learning and applied to various applications including search engines or relevance feedback systems. A query in such systems is the ranking function F learned by SVM. Once learning a function F or formulating the query, processing the query to find top-k results requires evaluating the entire database by F.So far, there exists no exact indexing solution for SVM functions. Existing top-k query processing algorithms are not applicable to the machine-learned ranking functions, as they often make restrictive assumptions on the query, such as linearity or monotonicity of functions. Existing metric-based or reference-based indexing methods are also not applicable, because data points are invisible in the kernel space (SVM feature space) on which the index must be built. Existing kernel indexing methods return approximate results or fix kernel parameters. This paper proposes an exact indexing solution for SVM functions with varying kernel parameters.We first propose key geometric properties of the kernel space -- ranking instability and ordering stability -- which is crucial for building indices in the kernel space. Based on them, we develop an index structure iKernel and processing algorithms. We then present clustering techniques in the kernel space to enhance the pruning effectiveness of the index. According to our experiments, iKernel is highly effective overall producing 1~5% of evaluation ratio on large data sets. According to our best knowledge, iKernel is the first indexing solution that finds exact top-k results of SVM functions without a full scan of data set.

BACKGROUND: Finding relevant articles from PubMed is challenging because it is hard to express the user's specific intention in the given query interface, and a keyword query typically retrieves a large number of results. Researchers have applied machine learning techniques to find relevant articles by ranking the articles according to the learned relevance function. However, the process of learning and ranking is usually done offline without integrated with the keyword queries, and the users have to provide a large amount of training documents to get a reasonable learning accuracy. This paper proposes a novel multi-level relevance feedback system for PubMed, called RefMed, which supports both ad-hoc keyword queries and a multi-level relevance feedback in real time on PubMed. RESULTS: RefMed supports a multi-level relevance feedback by using the RankSVM as the learning method, and thus it achieves higher accuracy with less feedback. RefMed "tightly" integrates the RankSVM into RDBMS to support both keyword queries and the multi-level relevance feedback in real time; the tight coupling of the RankSVM and DBMS substantially improves the processing time. An efficient parameter selection method for the RankSVM is also proposed, which tunes the RankSVM parameter without performing validation. Thereby, RefMed achieves a high learning accuracy in real time without performing a validation process. RefMed is accessible at http://dm.postech.ac.kr/refmed. CONCLUSIONS: RefMed is the first multi-level relevance feedback system for PubMed, which achieves a high accuracy with less feedback. It effectively learns an accurate relevance function from the user's feedback and efficiently processes the function to return relevant articles in real time.

Finding related articles from the PubMed (a large biomedical literature repository) is challenging because it is hard to express the user's specific relevance in the given query interface and a keyword query typically retrieves many results. Biomedical researchers spend a critical amount of time (e.g., often more than several days) in the literature search process. This paper proposes RefMed, a novel search system for PubMed, which supports relevance ranking by enabling relevance feedback on PubMed. RefMed first returns initial result documents for a user's keyword query as in PubMed. The user then makes relevance judgments on some of the resultant documents while browsing them. Once the user pushes the feedback, the system induces a relevance function using RankSVM and ranks the results according to the function. To realize the ad-hoc relevance retrieval on PubMed, RefMed tightly integrates RankSVM within RDBMS and runs the rank learning and process on the fly with a response time of a few minutes.Our qualitative experiments with biomedical researchers show that RefMed substantially reduces the amount of effort required to search related PubMed articles. RefMed is accessible at http://dm.postech.ac.kr/refmed.