Utku Umur Acikalin

dblp:273/4847 · DBLP profile ↗
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4ranked-venue papers
2as first author
4since 2021 · last 2026
0000-0002-0381-8831ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 3 · 2 first-author · 3 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1 · 1 since 2021Theory of computation · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
2 papers
Probabilistic and Bayesian machine learning · 54% Graph learning · 23% Optimization for machine learning · 23%
Theoretical computer science
2 papers
Mathematical optimization · 73% Algorithms and data structures · 27%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 7 heaviest of 8, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Mathematical optimization
combinatorial optimization
1.922026
Unsupervised Combinatorial Probabilistic Reasoning: Probabilistic Coin Change Problem · AAAI 2026
Learning to Explore and Exploit with GNNs for Unsupervised Combinatorial Optimization · ICLR 2025
Machine learning › Probabilistic and Bayesian machine learning › structured models › latent variable model
latent variable inference
1.012026
Unsupervised Combinatorial Probabilistic Reasoning: Probabilistic Coin Change Problem · AAAI 2026
Machine learning › Probabilistic and Bayesian machine learning
probabilistic inference
1.012026
Unsupervised Combinatorial Probabilistic Reasoning: Probabilistic Coin Change Problem · AAAI 2026
Algorithms and data structures › number-theoretic algorithms
coin problem
1.012026
Unsupervised Combinatorial Probabilistic Reasoning: Probabilistic Coin Change Problem · AAAI 2026
Machine learning › Optimization for machine learning
combinatorial optimization
0.912025
Learning to Explore and Exploit with GNNs for Unsupervised Combinatorial Optimization · ICLR 2025
Machine learning › Graph learning
graph neural network
0.912025
Learning to Explore and Exploit with GNNs for Unsupervised Combinatorial Optimization · ICLR 2025
Mathematical optimization › combinatorial optimization › learning-based combinatorial optimization
neural combinatorial optimization
0.912025
Learning to Explore and Exploit with GNNs for Unsupervised Combinatorial Optimization · ICLR 2025

Methods — techniques the papers use, named apart from their topics

reconstruction loss · 3.0differentiable probabilistic reasoning · 3.0deep learning · 3.0neural stochastic iterative refinement · 1.7graph neural network · 1.7exploration-exploitation · 1.7
YearPublicationVenuePosition
2026 Unsupervised Combinatorial Probabilistic Reasoning: Probabilistic Coin Change Problem
abstract
We introduce the Probabilistic Coin Change Problem (PCCP), a novel variant of the classical Combination Coin Change Problem (CCCP), motivated by a real-world scientific inverse task. The goal of CCCP is to enumerate all unordered combinations of coin denominations that sum to a given target. In PCCP, each coin type’s value follows a discrete probability distribution, and the aggregate value of a combination of coins is thus stochastic. Given a set of such coin types and noisy observations of total sums, the task is to infer the most likely latent coin combination. To address the combinatorial and probabilistic complexity of PCCP, we propose DeepProReasoner (Deep Combinatorial Probabilistic Reasoning with Embedded Representations), an unsupervised, end-to-end, deep-learning framework that integrates combinatorial reasoning, latent-space modeling, and differentiable probabilistic reasoning. The model is trained using a reconstruction loss between the observed empirical distribution and a decoded probability mass function (PMF), enabling efficient gradient-based search over a continuous relaxation of the combinatorial space. We evaluate DeepProReasoner on two instances of PCCP: (1) a synthetic Candy Mix problem for ablation studies, and (2) a real-world task of molecular formula inference from ultrahigh resolution mass spectrometry (MS) data. Besides the two given instances, PCCP captures a wide range of inverse settings in biology, chemistry, environmental sciences, and medicine, where latent combinatorial structures give rise to noisy aggregate observations through stochastic processes. Our results show that DeepProReasoner achieves high accuracy and robustness, outperforming state-of-the-art methods.
Zhongdi Qu, Yingheng Wang, Utku Umur Acikalin, Aaron M. Ferber, Goncalo J. Gouveia, Brandon Bills, Joshua Kline, Sunandini Yedla, Frank C. Schroeder, Carla P. Gomes
AAAI3
2025 Learning to Explore and Exploit with GNNs for Unsupervised Combinatorial Optimization
abstract
Combinatorial optimization (CO) problems are pervasive across various domains, but their NP-hard nature often necessitates problem-specific heuristic algorithms. Recent advancements in deep learning have led to the development of learning-based heuristics, yet these approaches often struggle with limited search capabilities. We introduce Explore-and-Exploit GNN ($X^2$GNN, pronounced x-squared GNN), a novel unsupervised neural framework that combines exploration and exploitation for combinatorial search optimization: i) Exploration - $X^2$GNN generates multiple solutions simultaneously, promoting diversity in the search space; (ii) Exploitation - $X^2$GNN employs neural stochastic iterative refinement to exploit partial existing solutions, guiding the search toward promising regions and helping escape local optima. By balancing exploration and exploitation, $X^2$GNN achieves superior performance and generalization on several graph CO problems including Max Cut, Max Independent Set, and Max Clique. Notably, for large Max Clique problems, $X^2$GNN consistently generates solutions within 1.2\% of optimality, while other state-of-the-art learning-based approaches struggle to reach within 22\% of optimal. Moreover, $X^2$GNN consistently generates better solutions than Gurobi on large graphs for all three problems under reasonable time budgets. Furthermore, $X^2$GNN exhibits exceptional generalization capabilities. For the Maximum Independent Set problem, $X^2$GNN outperforms state-of-the-art methods even when trained on smaller or out-of-distribution graphs compared to the test set. Our framework offers a more effective and flexible approach to neural combinatorial optimization, addressing a key challenge in the field and providing a promising direction for future research in learning-based heuristics for combinatorial optimization.
Utku Umur Acikalin, Aaron M. Ferber, Carla P. Gomes
ICLR1
2025 Models for Test Cost Minimization in Database Migration
abstract
Database migration is a ubiquitous need faced by enterprises that generate and use vast amounts of data. This is because of database software updates, or it is from changes to hardware, project standards, and other business factors. Migrating a large collection of databases is a way more challenging task than migrating a single database because of the presence of additional constraints. These constraints include capacities of shifts and sizes of databases. In this paper, we present a comprehensive framework that can be used to model database migration problems of different enterprises with customized constraints by appropriately instantiating the parameters of the framework. These parameters are the size of each database, the size of each shift, and the cost of testing each application. Each of these parameters can be either constant or arbitrary. Additionally, the cost of testing an application can be proportional to the number of databases that the application uses. We establish the computational complexities of a number of instantiations of this framework. We present fixed-parameter intractability results for various relevant parameters of the database migration problem. We also provide approximability and inapproximability results as well as lower bounds for the running time of any exact algorithm for the database migration problem. We show that the database migration problem is equivalent to a variation of the classical hypergraph partitioning problem. Our theoretical results also imply new theoretical results for the hypergraph partitioning problem that are interesting in their own right. Finally, we adapt heuristic algorithms devised for the hypergraph partitioning problem to the database migration problem, and we also give experimental results for the adapted heuristics. History: Accepted by Pascal Van Hentenryck, Area Editor for Computational Modeling: Methods & Analysis. Funding: B. Caskurlu and U. U. Acikalin are supported by The Scientific and Technological Research Council of Türkiye [Grant 122E599]. Supplemental Material: The software that supports the findings of this study is available within the paper and its Supplemental Information ( https://pubsonline.informs.org/doi/suppl/10.1287/ijoc.2023.0021 ) as well as from the IJOC GitHub software repository ( https://github.com/INFORMSJoC/2023.0021 ). The complete IJOC Software and Data Repository is available at https://informsjoc.github.io/ .
Bugra Çaskurlu, K. Subramani 0001, Utku Umur Acikalin, Alvaro Velasquez, Piotr Wojciechowski 0002
INFORMS J. Comput.3
2024 How you describe procurement calls matters: Predicting outcome of public procurement using call descriptions
abstract
Abstract A competitive and cost-effective public procurement (PP) process is essential for the effective use of public resources. In this work, we explore whether descriptions of procurement calls can be used to predict their outcomes. In particular, we focus on predicting four well-known economic metrics: (i) the number of offers, (ii) whether only a single offer is received, (iii) whether a foreign firm is awarded the contract, and (iv) whether the contract price exceeds the expected price. We extract the European Union’s multilingual PP notices, covering 22 different languages. We investigate fine-tuning multilingual transformer models and propose two approaches: (1) multilayer perceptron (MLP) models with transformer embeddings for each business sector in which the training data are filtered based on the procurement category and (2) a k-nearest neighbor (KNN)-based approach fine-tuned using triplet networks. The fine-tuned MBERT model outperforms all other models in predicting calls with a single offer and foreign contract awards, whereas our MLP-based filtering approach yields state-of-the-art results in predicting contracts in which the contract price exceeds the expected price. Furthermore, our KNN-based approach outperforms all the baselines in all tasks and our other proposed models in predicting the number of offers. Moreover, we investigate cross-lingual and multilingual training for our tasks and observe that multilingual training improves prediction accuracy in all our tasks. Overall, our experiments suggest that notice descriptions play an important role in the outcomes of PP calls.
Utku Umur Acikalin, Mustafa Kaan Gorgun, Mucahid Kutlu, Bedri Kamil Onur Tas
Nat. Lang. Eng.1