Demo Data from VLDB 2026 / reviewers in the wild / expert
Mikail Khona
dblp:280/1082
· DBLP profile ↗
9ranked-venue papers
2as first author
8since 2021 · last 2025
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Artificial intelligence and machine learning · 9 · 2 first-author · 8 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Artificial intelligence
7 papers |
Language models and text generation · 56% Trustworthy machine learning · 20% Representation and self-supervised learning · 14% | |
| Interdisciplinary, comprehensive, and emerging computing
3 papers |
Bioinformatics and computational biology · 100% |
Topics — the 15 heaviest of 17, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Natural language and speech › Language models and text generation
compositional generalization |
1.5 | 2 | 2024 | Compositional Capabilities of Autoregressive Transformers: A Study on Synthetic, Interpretable Tasks · ICML 2024 Towards an Understanding of Stepwise Inference in Transformers: A Synthetic Graph Navigation Model · ICML 2024 |
Bioinformatics and computational biology
computational neuroscience |
1.2 | 3 | 2023 | No Free Lunch from Deep Learning in Neuroscience: A Case Study through Models of the Entorhinal-Hippocampal Circuit · NeurIPS 2022 Reverse-engineering recurrent neural network solutions to a hierarchical inference task for mice · NeurIPS 2020 Self-Supervised Learning of Representations for Space Generates Multi-Modular Grid Cells · NeurIPS 2023 |
Machine learning › Deep learning architectures and training
transformer |
1.0 | 2 | 2024 | Compositional Capabilities of Autoregressive Transformers: A Study on Synthetic, Interpretable Tasks · ICML 2024 Towards an Understanding of Stepwise Inference in Transformers: A Synthetic Graph Navigation Model · ICML 2024 |
Machine learning › Trustworthy machine learning
data leakage |
0.9 | 1 | 2025 | Uncovering Latent Memories in Large Language Models · ICLR 2025 |
Natural language and speech › Language models and text generation
knowledge editing |
0.9 | 1 | 2025 | Representation Shattering in Transformers: A Synthetic Study with Knowledge Editing · ICML 2025 |
Natural language and speech › Language models and text generation › large language model › knowledge in language models
memorization |
0.9 | 1 | 2025 | Uncovering Latent Memories in Large Language Models · ICLR 2025 |
Machine learning › Trustworthy machine learning
privacy and data protection |
0.9 | 1 | 2025 | Uncovering Latent Memories in Large Language Models · ICLR 2025 |
Natural language and speech › Language models and text generation
chain-of-thought reasoning |
0.8 | 1 | 2024 | Towards an Understanding of Stepwise Inference in Transformers: A Synthetic Graph Navigation Model · ICML 2024 |
Natural language and speech › Language models and text generation
in-context learning |
0.8 | 1 | 2024 | Towards an Understanding of Stepwise Inference in Transformers: A Synthetic Graph Navigation Model · ICML 2024 |
Bioinformatics and computational biology › computational neuroscience › spatial navigation
grid cell modeling |
0.6 | 1 | 2022 | No Free Lunch from Deep Learning in Neuroscience: A Case Study through Models of the Entorhinal-Hippocampal Circuit · NeurIPS 2022 |
Natural language and speech › Language models and text generation › neural language model
autoregressive transformer |
0.2 | 1 | 2024 | Towards an Understanding of Stepwise Inference in Transformers: A Synthetic Graph Navigation Model · ICML 2024 |
Bioinformatics and computational biology › computational neuroscience
grid cell |
0.2 | 1 | 2023 | Self-Supervised Learning of Representations for Space Generates Multi-Modular Grid Cells · NeurIPS 2023 |
Machine learning › Trustworthy machine learning › interpretability › explainable AI
interpretable deep learning |
0.2 | 1 | 2022 | No Free Lunch from Deep Learning in Neuroscience: A Case Study through Models of the Entorhinal-Hippocampal Circuit · NeurIPS 2022 |
Machine learning › Trustworthy machine learning
interpretability |
0.1 | 1 | 2020 | Reverse-engineering recurrent neural network solutions to a hierarchical inference task for mice · NeurIPS 2020 |
Machine learning › Efficient and distributed learning › model compression
knowledge distillation |
0.1 | 1 | 2020 | Reverse-engineering recurrent neural network solutions to a hierarchical inference task for mice · NeurIPS 2020 |
Methods — techniques the papers use, named apart from their topics
mechanistic analysis · 1.6self-supervised learning · 1.3recurrent neural network · 1.3hyperparameter sweep · 1.1weight perturbation · 0.9synthetic knowledge graph task · 0.9cross-entropy loss diagnostic · 0.9synthetic graph navigation task · 0.8synthetic data-generating process · 0.8attention analysis · 0.8theory-driven experimentation · 0.6model compression · 0.4knowledge distillation · 0.4
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2025 | Uncovering Latent Memories in Large Language ModelsabstractFrontier AI systems are making transformative impacts across society, but such benefits are not without costs: models trained on web-scale datasets containing personal and private data raise profound concerns about data privacy and security. Language models are trained on extensive corpora including potentially sensitive or proprietary information, and the risk of data leakage, where the model response reveals pieces of such information, remains inadequately understood. Prior work has investigated that sequence complexity and the number of repetitions are the primary drivers of memorization. In this work, we examine the most vulnerable class of data: highly complex sequences that are presented only once during training. These sequences often contain the most sensitive information and pose considerable risk if memorized. By analyzing the progression of memorization for these sequences throughout training, we uncover a striking observation: many memorized sequences persist in the model's memory, exhibiting resistance to catastrophic forgetting even after just one encounter. Surprisingly, these sequences may not appear memorized immediately after their first exposure but can later be “uncovered” during training, even in the absence of subsequent exposures - a phenomenon we call "latent memorization." Latent memorization presents a serious challenge for data privacy, as sequences that seem hidden at the final checkpoint of a model may still be easily recoverable. We demonstrate how these hidden sequences can be revealed through random weight perturbations, and we introduce a diagnostic test based on cross-entropy loss to accurately identify latent memorized sequences. Sunny Duan, Mikail Khona, Abhiram Iyer, Rylan Schaeffer, Ila Fiete |
ICLR | 2 |
| 2025 | Representation Shattering in Transformers: A Synthetic Study with Knowledge EditingabstractKnowledge Editing (KE) algorithms alter models’ weights to perform targeted updates to incorrect, outdated, or otherwise unwanted factual associations. However, recent work has shown that applying KE can adversely affect models’ broader factual recall accuracy and diminish their reasoning abilities. Although these studies give insights into the potential harms of KE algorithms, e.g., performance evaluations on benchmarks, little is understood about why such destructive failures occur. Motivated by this, we define a novel synthetic task in which a Transformer is trained from scratch to internalize a "structured" knowledge graph. The structure enforces relationships between entities of the graph, such that editing a factual association has "trickling effects" on other entities (e.g., altering X’s parent is Y to Z affects who X’s siblings’ parent is). Through evaluations of edited models on this task, we show that KE inadvertently affects representations of entities beyond the targeted one, distorting relevant structures that allow a model to infer unseen knowledge about an entity. We call this phenomenon representation shattering and demonstrate that it degrades models’ factual recall and reasoning performance. We further corroborate our findings in naturalistic settings with pre-trained Llama and Mamba models as well. Overall, our work yields a precise mechanistic hypothesis to explain why KE has adverse effects on model abilities. Kento Nishi, Rahul Ramesh, Maya Okawa, Mikail Khona, Hidenori Tanaka, Ekdeep Singh Lubana |
ICML | 4 |
| 2024 | Towards an Understanding of Stepwise Inference in Transformers: A Synthetic Graph Navigation ModelabstractStepwise inference protocols, such as scratchpads and chain-of-thought, help language models solve complex problems by decomposing them into a sequence of simpler subproblems. To unravel the underlying mechanisms of stepwise inference we propose to study autoregressive Transformer models on a synthetic task that embodies the multi-step nature of problems where stepwise inference is generally most useful. Specifically, we define a graph navigation problem wherein a model is tasked with traversing a path from a start to a goal node on the graph. We find we can empirically reproduce and analyze several phenomena observed at scale: (i) the stepwise inference reasoning gap, the cause of which we find in the structure of the training data; (ii) a diversity-accuracy trade-off in model generations as sampling temperature varies; (iii) a simplicity bias in the model’s output; and (iv) compositional generalization and a primacy bias with in-context exemplars. Overall, our work introduces a grounded, synthetic framework for studying stepwise inference and offers mechanistic hypotheses that can lay the foundation for a deeper understanding of this phenomenon. Mikail Khona, Maya Okawa, Jan Hula, Rahul Ramesh, Kento Nishi, Robert P. Dick, Ekdeep Singh Lubana, Hidenori Tanaka |
ICML | 1 |
| 2024 | Compositional Capabilities of Autoregressive Transformers: A Study on Synthetic, Interpretable TasksabstractTransformers trained on huge text corpora exhibit a remarkable set of capabilities, e.g., performing simple logical operations. Given the inherent compositional nature of language, one can expect the model to learn to compose these capabilities, potentially yielding a combinatorial explosion of what operations it can perform on an input. Motivated by the above, we aim to assess in this paper “how capable can a transformer become?”. Specifically, we train autoregressive Transformer models on a data-generating process that involves compositions of a set of well-defined monolithic capabilities. Through a series of extensive and systematic experiments on this data-generating process, we show that: (1) autoregressive Transformers can learn compositional structures from small amounts of training data and generalize to exponentially or even combinatorially many functions; (2) composing functions by generating intermediate outputs is more effective at generalizing to unseen compositions, compared to generating no intermediate outputs; (3) biases in the order of the compositions in the training data, results in Transformers that fail to compose some combinations of functions; and (4) the attention layers seem to select the capability to apply while the feed-forward layers execute the capability. Rahul Ramesh, Ekdeep Singh Lubana, Mikail Khona, Robert P. Dick, Hidenori Tanaka |
ICML | 3 |
| 2023 | Self-Supervised Learning of Representations for Space Generates Multi-Modular Grid CellsabstractTo solve the spatial problems of mapping, localization and navigation, the mammalian lineage has developed striking spatial representations. One important spatial representation is the Nobel-prize winning grid cells: neurons that represent self-location, a local and aperiodic quantity, with seemingly bizarre non-local and spatially periodic activity patterns of a few discrete periods. Why has the mammalian lineage learnt this peculiar grid representation? Mathematical analysis suggests that this multi-periodic representation has excellent properties as an algebraic code with high capacity and intrinsic error-correction, but to date, synthesis of multi-modular grid cells in deep recurrent neural networks remains absent. In this work, we begin by identifying key insights from four families of approaches to answering the grid cell question: dynamical systems, coding theory, function optimization and supervised deep learning. We then leverage our insights to propose a new approach that elegantly combines the strengths of all four approaches. Our approach is a self-supervised learning (SSL) framework - including data, data augmentations, loss functions and a network architecture - motivated from a normative perspective, with no access to supervised position information. Without making assumptions about internal or readout representations, we show that multiple grid cell modules can emerge in networks trained on our SSL framework and that the networks generalize significantly beyond their training distribution. This work contains insights for neuroscientists interested in the origins of grid cells as well as machine learning researchers interested in novel SSL frameworks. Rylan Schaeffer, Mikail Khona, Tzuhsuan Ma, Cristóbal Eyzaguirre, Oluwasanmi Koyejo, Ila Fiete |
NeurIPS | 2 |
| 2023 | Winning the Lottery With Neural Connectivity Constraints: Faster Learning Across Cognitive Tasks With Spatially Constrained Sparse RNNsabstractRecurrent neural networks (RNNs) are often used to model circuits in the brain and can solve a variety of difficult computational problems requiring memory, error correction, or selection (Hopfield, 1982; Maass et al., 2002; Maass, 2011). However, fully connected RNNs contrast structurally with their biological counterparts, which are extremely sparse (about 0.1%). Motivated by the neocortex, where neural connectivity is constrained by physical distance along cortical sheets and other synaptic wiring costs, we introduce locality masked RNNs (LM-RNNs) that use task-agnostic predetermined graphs with sparsity as low as 4%. We study LM-RNNs in a multitask learning setting relevant to cognitive systems neuroscience with a commonly used set of tasks, 20-Cog-tasks (Yang et al., 2019). We show through reductio ad absurdum that 20-Cog-tasks can be solved by a small pool of separated autapses that we can mechanistically analyze and understand. Thus, these tasks fall short of the goal of inducing complex recurrent dynamics and modular structure in RNNs. We next contribute a new cognitive multitask battery, Mod-Cog, consisting of up to 132 tasks that expands by about seven-fold the number of tasks and task complexity of 20-Cog-tasks. Importantly, while autapses can solve the simple 20-Cog-tasks, the expanded task set requires richer neural architectures and continuous attractor dynamics. On these tasks, we show that LM-RNNs with an optimal sparsity result in faster training and better data efficiency than fully connected networks. Mikail Khona, Sarthak Chandra, Joy J. Ma, Ila Fiete |
Neural Comput. | 1 |
| 2022 | No Free Lunch from Deep Learning in Neuroscience: A Case Study through Models of the Entorhinal-Hippocampal CircuitabstractResearch in Neuroscience, as in many scientific disciplines, is undergoing a renaissance based on deep learning. Unique to Neuroscience, deep learning models can be used not only as a tool but interpreted as models of the brain. The central claims of recent deep learning-based models of brain circuits are that they make novel predictions about neural phenomena or shed light on the fundamental functions being optimized. We show, through the case-study of grid cells in the entorhinal-hippocampal circuit, that one may get neither. We begin by reviewing the principles of grid cell mechanism and function obtained from first-principles modeling efforts, then rigorously examine the claims of deep learning models of grid cells. Using large-scale architectural and hyperparameter sweeps and theory-driven experimentation, we demonstrate that the results of such models may be more strongly driven by particular, non-fundamental, and post-hoc implementation choices than fundamental truths about neural circuits or the loss function(s) they might optimize. We discuss why these models cannot be expected to produce accurate models of the brain without the addition of substantial amounts of inductive bias, an informal No Free Lunch result for Neuroscience. Based on first principles work, we provide hypotheses for what additional loss functions will produce grid cells more robustly. In conclusion, circumspection and transparency, together with biological knowledge, are warranted in building and interpreting deep learning models in Neuroscience. Rylan Schaeffer, Mikail Khona, Ila Fiete |
NeurIPS | 2 |
| 2021 | Efficient online inference for nonparametric mixture modelsabstractNatural data are often well-described as belonging to latent clusters. When the number of clusters is unknown, Bayesian nonparametric (BNP) models can provide a flexible and powerful technique to model the data. However, algorithms for inference in nonparametric mixture models fail to meet two critical requirements for practical use: (1) that inference can be performed online, and (2) that inference is efficient in the large time/sample limit. In this work, we propose a novel Bayesian recursion to efficiently infer a posterior distribution over discrete latent variables from a sequence of observations in an online manner, assuming a Chinese Restaurant Process prior on the sequence of latent variables. Our recursive filter, which we call the Recursive Chinese Restaurant Process (R-CRP), has quasilinear average time complexity and logarithmic average space complexity in the total number of observations. We experimentally compare our filtering method against both online and offline inference algorithms including Markov chain Monte Carlo, variational approximations and DP-Means, and demonstrate that our inference algorithm achieves comparable or better performance for a fraction of the runtime. Rylan Schaeffer, Blake Bordelon, Mikail Khona, Ila Fiete |
UAI | 3 |
| 2020 | Reverse-engineering recurrent neural network solutions to a hierarchical inference task for miceabstractWe study how recurrent neural networks (RNNs) solve a hierarchical inference task involving two latent variables and disparate timescales separated by 1-2 orders of magnitude. The task is of interest to the International Brain Laboratory, a global collaboration of experimental and theoretical neuroscientists studying how the mammalian brain generates behavior. We make four discoveries. First, RNNs learn behavior that is quantitatively similar to ideal Bayesian baselines. Second, RNNs perform inference by learning a two-dimensional subspace defining beliefs about the latent variables. Third, the geometry of RNN dynamics reflects an induced coupling between the two separate inference processes necessary to solve the task. Fourth, we perform model compression through a novel form of knowledge distillation on hidden representations -- Representations and Dynamics Distillation (RADD)-- to reduce the RNN dynamics to a low-dimensional, highly interpretable model. This technique promises a useful tool for interpretability of high dimensional nonlinear dynamical systems. Altogether, this work yields predictions to guide exploration and analysis of mouse neural data and circuity. Rylan Schaeffer, Mikail Khona, Leenoy Meshulam, Ila Fiete |
NeurIPS | 2 |