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Jiazhen Rong

dblp:295/2275 · DBLP profile ↗
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1ranked-venue papers
0as first author
1since 2021 · last 2021
0000-0002-7884-5973ORCID · reported

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 1 heaviest of 1, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › genomics › genomic interval analysis
genomic interval operations		 0.512021
Bedtk: finding interval overlap with implicit interval tree · Bioinform. 2021

Methods — techniques the papers use, named apart from their topics

implicit interval tree · 0.5
YearPublicationVenuePosition
2021 Bedtk: finding interval overlap with implicit interval tree
abstract
SUMMARY: We present bedtk, a new toolkit for manipulating genomic intervals in the BED format. It supports sorting, merging, intersection, subtraction and the calculation of the breadth of coverage. Bedtk uses implicit interval tree, a data structure for fast interval overlap queries. It is several to tens of times faster than existing tools and tends to use less memory. AVAILABILITY AND IMPLEMENTATION: The source code is available at https://github.com/lh3/bedtk.
Heng Li 0002, Jiazhen Rong
 Bioinform.2