Several authors have previously discussed the use of log-linear models, often called maximum entropy models, for analyzing spike train data to detect synchrony. The usual log-linear modeling techniques, however, do not allow time-varying firing rates that typically appear in stimulus-driven (or action-driven) neurons, nor do they incorporate non-Poisson history effects or covariate effects. We generalize the usual approach, combining point-process regression models of individual neuron activity with log-linear models of multiway synchronous interaction. The methods are illustrated with results found in spike trains recorded simultaneously from primary visual cortex. We then assess the amount of data needed to reliably detect multiway spiking.

Activity of a neuron, even in the early sensory areas, is not simply a function of its local receptive field or tuning properties, but depends on global context of the stimulus, as well as the neural context. This suggests the activity of the surrounding neurons and global brain states can exert considerable influence on the activity of a neuron. In this paper we implemented an L1 regularized point process model to assess the contribution of multiple factors to the firing rate of many individual units recorded simultaneously from V1 with a 96-electrode Utah" array. We found that the spikes of surrounding neurons indeed provide strong predictions of a neuron's response, in addition to the neuron's receptive field transfer function. We also found that the same spikes could be accounted for with the local field potentials, a surrogate measure of global network states. This work shows that accounting for network fluctuations can improve estimates of single trial firing rate and stimulus-response transfer functions."

Decoding is a strategy that allows us to assess the amount of information neurons can provide about certain aspects of the visual scene. In this study, we develop a method based on Bayesian sequential updating and the particle filtering algorithm to decode the activity of V1 neurons in awake monkeys. A distinction in our method is the use of Volterra ker- nels to filter the particles, which live in a high dimensional space. This parametric Bayesian decoding scheme is compared to the optimal linear decoder and is shown to work consistently better than the linear optimal decoder. Interestingly, our results suggest that for decoding in real time, spike trains of as few as 10 independent but similar neurons would be sufficient for decoding a critical scene variable in a particular class of visual stimuli. The reconstructed variable can predict the neural activity about as well as the actual signal with respect to the Volterra kernels.