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E. G. Patrick Bos

dblp:32/10483 · also E. G. P. (Patrick) Bos · DBLP profile ↗
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2ranked-venue papers
1as first author
0since 2021 · last 2018
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Software engineering, systems software and programming languages · 1 · 1 first-authorGraphics, computer vision, multimedia, augmented reality and games · 1Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Computer graphics and multimedia
1 paper
Visualization and visual analytics · 100%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Computational science and engineering · 100%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Visualization and visual analytics › scientific visualization
astronomical visualization
0.212016
Felix: A Topology Based Framework for Visual Exploration of Cosmic Filaments · IEEE Trans. Vis. Comput. Graph. 2016
Visualization and visual analytics › topological data analysis
morse-smale complex
0.212016
Felix: A Topology Based Framework for Visual Exploration of Cosmic Filaments · IEEE Trans. Vis. Comput. Graph. 2016
Visualization and visual analytics
topological data analysis
0.212016
Felix: A Topology Based Framework for Visual Exploration of Cosmic Filaments · IEEE Trans. Vis. Comput. Graph. 2016
Computational science and engineering › cosmology
cosmological simulation
0.112016
Felix: A Topology Based Framework for Visual Exploration of Cosmic Filaments · IEEE Trans. Vis. Comput. Graph. 2016

Methods — techniques the papers use, named apart from their topics

hierarchical morse-smale complex · 0.5ascending manifold geometry · 0.5
YearPublicationVenuePosition
2018 Automated Parallel Calculation of Collaborative Statistical Models in RooFit
abstract
RooFit [4], [6] is the statistical modeling and fitting package used in many big particle physics experiments to extract physical parameters from reduced particle collision data, e.g. the Higgs boson experiments at the LHC [1], [2]. RooFit aims to separate particle physics model building and fitting (the users' goals) from their technical implementation and optimization in the back-end. In this paper, we outline our efforts to further optimize the back-end by automatically running major parts of user models in parallel on multi-core machines. A major challenge is that RooFit allows users to define many different types of models, with different types of computational bottlenecks. Our automatic parallelization framework must then be flexible, while still reducing run-time by at least an order of magnitude, preferably more. We have performed extensive benchmarks and identified at least three bottlenecks that will benefit from parallelization. To tackle these and possible future bottlenecks, we designed a parallelization layer that allows us to parallelize existing classes with minimal effort, but with high performance and retaining as much of the existing class's interface as possible. The high-level parallelization model is a task-stealing approach. The implementation is currently based on a multi-process approach using a bi-directional memory mapped pipe for communication, which is both easy to use and highly performant. Preliminary results show speed-ups of factor 2 to 20, depending on the exact model and parallelization strategy.
E. G. Patrick Bos, F. Inti Pelupessy, Vincent A. Croft, Wouter Verkerke, Carsten D. Burgard
eScience1
2016 Felix: A Topology Based Framework for Visual Exploration of Cosmic Filaments
abstract
The large-scale structure of the universe is comprised of virialized blob-like clusters, linear filaments, sheet-like walls and huge near empty three-dimensional voids. Characterizing the large scale universe is essential to our understanding of the formation and evolution of galaxies. The density range of clusters, walls and voids are relatively well separated, when compared to filaments, which span a relatively larger range. The large scale filamentary network thus forms an intricate part of the cosmic web. In this paper, we describe Felix, a topology based framework for visual exploration of filaments in the cosmic web. The filamentary structure is represented by the ascending manifold geometry of the 2-saddles in the Morse-Smale complex of the density field. We generate a hierarchy of Morse-Smale complexes and query for filaments based on the density ranges at the end points of the filaments. The query is processed efficiently over the entire hierarchical Morse-Smale complex, allowing for interactive visualization. We apply Felix to computer simulations based on the heuristic Voronoi kinematic model and the standard ACDM cosmology, and demonstrate its usefulness through two case studies. First, we extract cosmic filaments within and across cluster like regions in Voronoi kinematic simulation datasets. We demonstrate that we produce similar results to existing structure finders. Second, we extract different classes of filaments based on their density characteristics from the ACDM simulation datasets. Filaments that form the spine of the cosmic web, which exist in high density regions in the current epoch, are isolated using Felix. Also, filaments present in void-like regions are isolated and visualized. These filamentary structures are often over shadowed by higher density range filaments and are not easily characterizable and extractable using other filament extraction methodologies.
Nithin Shivashankar, Pratyush Pranav, Vijay Natarajan, Rien van de Weygaert, E. G. Patrick Bos, Steven Rieder
IEEE Trans. Vis. Comput. Graph.5