Peter J. Schüffler

dblp:34/8484 · also Peter Schueffler, Peter Schüffler · DBLP profile ↗
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10ranked-venue papers
1as first author
6since 2021 · last 2026
0000-0002-1353-8921ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 9 · 1 first-author · 5 since 2021Graphics, computer vision, multimedia, augmented reality and games · 5 · 2 since 2021
YearPublicationVenuePosition
2026 PASS-Tr: PAtch-wise swin slice attention to leverage generalization of 2D large vision model to universal lesion detection
Jingsong Liu, Zhen Huang 0007, Xun Ma, Peter J. Schüffler, Nassir Navab, Shaohua Kevin Zhou
Medical Image Anal.6
2026 MoMBS: Mixed-order sampling improves training on heterogeneous-quality data for universal lesion detection
Jingsong Liu, Peter J. Schüffler, Hu Han 0001, Shaohua Kevin Zhou
Medical Image Anal.3
2025 HASD: Hierarchical Adaption for Pathology Slide-Level Domain-Shift
Jingsong Liu, Michael Deutges, Ario Sadafi, Xin You 0002, Katharina Breininger, Nassir Navab, Peter J. Schüffler
MICCAI (6)9
2025 Stochastic latent feature distillation: Enhancing dataset distillation via structured uncertainty modeling
abstract
As deep learning models continue to scale in complexity and data size, reducing storage and training costs has become increasingly important. Dataset distillation addresses this challenge by synthesizing a small set of synthetic samples that effectively substitute for the original dataset in downstream tasks. Existing approaches typically rely on matching gradients or features either in pixel space or in the latent space of a pretrained generative model. We propose a novel stochastic distillation method that models the joint distribution of latent features using a low-rank multivariate normal distribution, parameterized by a lightweight neural network. This formulation captures spatial correlations in the feature space, which are then projected into class probability space to generate more diverse and informative predictions. The proposed module integrates seamlessly with existing distillation pipelines. Our method achieves state-of-the-art cross-architecture results, improving test accuracy by up to 7.47% in gradient matching and 35.71% in distribution matching over baselines. • Introduce SLFD, a framework that distills data with stochastic latent features. • Model spatial correlations using a low-rank multivariate distribution. • Achieve robust performance on high-resolution ImageNet-1K subsets. • Demonstrate applicability to medical imaging with strong results.
Zhe Li 0025, Sarah Cechnicka, Cheng Ouyang, Katharina Breininger, Peter J. Schüffler, Bernhard Kainz
J. Vis. Commun. Image Represent.5
2021 Integrated digital pathology at scale: A solution for clinical diagnostics and cancer research at a large academic medical center
abstract
OBJECTIVE: Broad adoption of digital pathology (DP) is still lacking, and examples for DP connecting diagnostic, research, and educational use cases are missing. We blueprint a holistic DP solution at a large academic medical center ubiquitously integrated into clinical workflows; researchapplications including molecular, genetic, and tissue databases; and educational processes. MATERIALS AND METHODS: We built a vendor-agnostic, integrated viewer for reviewing, annotating, sharing, and quality assurance of digital slides in a clinical or research context. It is the first homegrown viewer cleared by New York State provisional approval in 2020 for primary diagnosis and remote sign-out during the COVID-19 (coronavirus disease 2019) pandemic. We further introduce an interconnected Honest Broker for BioInformatics Technology (HoBBIT) to systematically compile and share large-scale DP research datasets including anonymized images, redacted pathology reports, and clinical data of patients with consent. RESULTS: The solution has been operationally used over 3 years by 926 pathologists and researchers evaluating 288 903 digital slides. A total of 51% of these were reviewed within 1 month after scanning. Seamless integration of the viewer into 4 hospital systems clearly increases the adoption of DP. HoBBIT directly impacts the translation of knowledge in pathology into effective new health measures, including artificial intelligence-driven detection models for prostate cancer, basal cell carcinoma, and breast cancer metastases, developed and validated on thousands of cases. CONCLUSIONS: We highlight major challenges and lessons learned when going digital to provide orientation for other pathologists. Building interconnected solutions will not only increase adoption of DP, but also facilitate next-generation computational pathology at scale for enhanced cancer research.
Peter J. Schüffler, Luke Geneslaw, Dig Vijay Kumar Yarlagadda, Matthew G. Hanna, Jennifer Samboy, Evangelos Stamelos, Chad Vanderbilt, John Philip, Marc-Henri Jean, Lorraine Corsale, Allyne Manzo, Neeraj H. G. Paramasivam, John S. Ziegler, Jianjiong Gao, Juan C. Perin, Young Suk Kim, Umeshkumar K. Bhanot, Michael H. A. Roehrl, Orly Ardon, Sarah Chiang, Dilip D. Giri, Carlie S. Sigel, Lee K. Tan, Melissa Murray, Christina Virgo, Christine England, Yukako Yagi, S. Joseph Sirintrapun, David S. Klimstra, Meera R. Hameed, Victor E. Reuter, Thomas J. Fuchs
J. Am. Medical Informatics Assoc.1
2021 Deep Learning Methods for Lung Cancer Segmentation in Whole-Slide Histopathology Images - The ACDC@LungHP Challenge 2019
abstract
Accurate segmentation of lung cancer in pathology slides is a critical step in improving patient care. We proposed the ACDC@LungHP (Automatic Cancer Detection and Classification in Whole-slide Lung Histopathology) challenge for evaluating different computer-aided diagnosis (CADs) methods on the automatic diagnosis of lung cancer. The ACDC@LungHP 2019 focused on segmentation (pixel-wise detection) of cancer tissue in whole slide imaging (WSI), using an annotated dataset of 150 training images and 50 test images from 200 patients. This paper reviews this challenge and summarizes the top 10 submitted methods for lung cancer segmentation. All methods were evaluated using metrics using the precision, accuracy, sensitivity, specificity, and DICE coefficient (DC). The DC ranged from 0.7354 ±0.1149 to 0.8372 ±0.0858. The DC of the best method was close to the inter-observer agreement (0.8398 ±0.0890). All methods were based on deep learning and categorized into two groups: multi-model method and single model method. In general, multi-model methods were significantly better (p 0.01) than single model methods, with mean DC of 0.7966 and 0.7544, respectively. Deep learning based methods could potentially help pathologists find suspicious regions for further analysis of lung cancer in WSI.
Tao Tan 0002, Xichao Teng, Xiaoliang Sun, Lihong Liu, Byungjae Lee, Yilong Li 0002, Qianni Zhang, Shujiao Sun, Yushan Zheng, Junyu Yan, Yiyu Hong, Junsu Ko, Hyun Jung, Ching-Wei Wang, Vladimir Yurovskiy, Pavel Maevskikh, Vahid Khanagha, Daiqiang Li, Peter J. Schüffler, Hui Chen 0020, Yuling Tang, Geert Litjens 0001
IEEE J. Biomed. Health Informatics29
2020 Deep Interactive Learning: An Efficient Labeling Approach for Deep Learning-Based Osteosarcoma Treatment Response Assessment
David Joon Ho, Narasimhan P. Agaram, Peter J. Schüffler, Chad Vanderbilt, Marc-Henri Jean, Meera R. Hameed, Thomas J. Fuchs
MICCAI (5)3
2017 MRI-Based Surgical Planning for Lumbar Spinal Stenosis
Gabriele Abbati, Stefan Bauer, Sebastian Winklhofer, Peter J. Schüffler, Ulrike Held, Jakob M. Burgstaller, Johann Steurer, Joachim M. Buhmann
MICCAI (3)4
2013 Semi-Supervised and Active Learning for Automatic Segmentation of Crohn's Disease
Dwarikanath Mahapatra, Peter J. Schüffler, Jeroen A. W. Tielbeek, Frans Vos, Joachim M. Buhmann
MICCAI (2)2
2013 Automatic Detection and Segmentation of Crohn's Disease Tissues From Abdominal MRI
abstract
We propose an information processing pipeline for segmenting parts of the bowel in abdominal magnetic resonance images that are affected with Crohn's disease. Given a magnetic resonance imaging test volume, it is first oversegmented into supervoxels and each supervoxel is analyzed to detect presence of Crohn's disease using random forest (RF) classifiers. The supervoxels identified as containing diseased tissues define the volume of interest (VOI). All voxels within the VOI are further investigated to segment the diseased region. Probability maps are generated for each voxel using a second set of RF classifiers which give the probabilities of each voxel being diseased, normal or background. The negative log-likelihood of these maps are used as penalty costs in a graph cut segmentation framework. Low level features like intensity statistics, texture anisotropy and curvature asymmetry, and high level context features are used at different stages. Smoothness constraints are imposed based on semantic information (importance of each feature to the classification task) derived from the second set of learned RF classifiers. Experimental results show that our method achieves high segmentation accuracy with Dice metric values of 0.90 ± 0.04 and Hausdorff distance of 7.3 ± 0.8 mm. Semantic information and context features are an integral part of our method and are robust to different levels of added noise.
Dwarikanath Mahapatra, Peter J. Schüffler, Jeroen A. W. Tielbeek, Jesica Makanyanga, Jaap Stoker, Stuart A. Taylor, Frans Vos, Joachim M. Buhmann
IEEE Trans. Medical Imaging2