Demo Data from VLDB 2026 / reviewers in the wild / expert
Takashi Naka
dblp:37/3775
· DBLP profile ↗
2ranked-venue papers
0as first author
0since 2021 · last 2017
0000-0003-4258-1926ORCID · corroborated
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 2
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% | |
| Computer architecture, parallel and distributed computing, and storage systems
1 paper |
Distributed systems · 100% |
Topics — the 5 heaviest of 5, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › systems biology
biochemical simulation |
0.0 | 1 | 2004 | OBIYagns: a grid-based biochemical simulator with a parameter estimator · Bioinform. 2004 |
Bioinformatics and computational biology › systems biology
computational systems biology |
0.0 | 1 | 2004 | OBIYagns: a grid-based biochemical simulator with a parameter estimator · Bioinform. 2004 |
Bioinformatics and computational biology › biological network › network biology
genetic network simulation |
0.0 | 1 | 2004 | OBIYagns: a grid-based biochemical simulator with a parameter estimator · Bioinform. 2004 |
Bioinformatics and computational biology › systems biology
parameter estimation |
0.0 | 1 | 2004 | OBIYagns: a grid-based biochemical simulator with a parameter estimator · Bioinform. 2004 |
Distributed systems
grid computing |
0.0 | 1 | 2004 | OBIYagns: a grid-based biochemical simulator with a parameter estimator · Bioinform. 2004 |
Methods — techniques the papers use, named apart from their topics
parameter estimation · 0.1ordinary differential equation solver · 0.1
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2017 | Exhaustive Analysis for the Effects of a Feedback Regulation on the Bi-Stability in Cellular Signaling Systems
Chinasa Sueyoshi, Takashi Naka |
ICCSA (1) | 2 |
| 2004 | OBIYagns: a grid-based biochemical simulator with a parameter estimatorabstractUNLABELLED: OBIYagns (yet another gene network simulator) is a biochemical system simulator that comprises a multiple-user Web-based graphical interface, an ordinary differential equation solver and a parameter estimators distributed over an open bioinformatics grid (OBIGrid). This grid-based biochemical simulation system can achieve high performance and provide a secure simulation environment for estimating kinetic parameters in an acceptable time period. OBIYagns can be applied to larger system biology-oriented simulation projects. AVAILABILITY: OBIYagns example models, methods and user guide are available at https://access.obigrid.org/yagns/ SUPPLEMENTARY INFORMATION: Please refer to Bioinformatics online. Shuhei Kimura, Takuji Kawasaki, Mariko Okada, Takashi Naka, Fumikazu Konishi, Akihiko Konagaya |
Bioinform. | 4 |