VLDB 2026 Research / reviewers in the wild / expert
Hongming Zhu
dblp:37/4215
· DBLP profile ↗
35ranked-venue papers
7as first author
26since 2021 · last 2026
—ORCID · conflict
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 15 · 1 first-author · 13 since 2021Artificial intelligence and machine learning · 9 · 2 first-author · 5 since 2021Software engineering, systems software and programming languages · 9 · 4 first-author · 3 since 2021Human-computer interaction and ubiquitous computing · 9 · 2 first-author · 8 since 2021Databases, data management, data science and information retrieval · 2 · 1 since 2021Graphics, computer vision, multimedia, augmented reality and games · 2 · 1 first-author · 1 since 2021Computer networks · 1 · 1 since 2021
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | Hgtsynergy: a transfer learning method for predicting anticancer synergistic drug combinations based on a drug-drug interaction heterogeneous graphabstractBACKGROUND: Drug combination therapy often outperforms monotherapy in cancer treatment, but the vast number of available drugs makes manual screening for synergistic combinations costly. Computational methods, especially deep learning, can reduce the search space by predicting likely synergistic drug combinations. Recent studies have improved drug synergy prediction by modeling associations among different biological entities, but drug-drug interactions have not been fully leveraged in this scenario, which motivated the work presented in this paper. METHODS: This paper proposes a deep learning method named HGTSynergy to predict synergistic drug combinations, which employs a heterogeneous graph attention network and a tailored task to capture complex latent patterns in the drug network as prior knowledge. The learned knowledge is then transferred through a transfer learning framework to the downstream task of predicting drug synergy scores, effectively enhancing predictive performance. RESULTS: A five-fold nested cross-validation is employed to train HGTSynergy. In the synergy regression task, HGTSynergy outperforms seven deep learning methods, achieving a mean squared error of 222.83, root mean squared error of 14.91, and Pearson correlation coefficient of 0.75. For the synergy classification task, it also surpasses other methods with an area under the receiver operating characteristic curve of 0.90, area under the precision-recall curve of 0.63, accuracy of 0.94, precision of 0.72, and Cohen's Kappa of 0.52. The ablation study verifies that the heterogeneous graph attention network and the transfer learning framework both have a positive effect on prediction performance. Moreover, a series of analyses demonstrates that the proposed method exhibits strong generalization performance and interpretability. The case study further validates its consistency with prior research. CONCLUSIONS: This study suggests that drug synergy prediction can be improved by comprehensively modeling diverse drug-drug interaction types and leveraging transfer learning to extract prior knowledge from them. The ability of HGTSynergy to discover new anticancer synergistic drug combinations outperforms other state-of-the-art methods. HGTSynergy promises to be a powerful tool to pre-screen anticancer synergistic drug combinations. Xiaowen Wang 0003, Yanming Huang, Hongming Zhu, Dongsheng Mao, Xiaoli Zhu, Qin Liu 0004 |
BMC Bioinform. | 3 |
| 2026 | Security Control Against FDI Attacks via Adaptive Off-Policy Value Iteration Q-Learning Approach
Hongming Zhu, Chengwei Wu 0001, Lezhong Xu, Jianxing Liu, Ligang Wu 0001 |
IEEE Trans. Syst. Man Cybern. Syst. | 1 |
| 2025 | ODCCMamba-Unet: A Mamba-Unet Based Model with Omnidirectional Divide-and-Conquer Scanning Mechanism for Remote Sensing Image Change Detection
Hongming Zhu, Qin Liu 0004, Qiulu Dai, Bowen Du 0002 |
PRCV (2) | 1 |
| 2025 | MGPSyn: Molecular Graph Pretraining Enhanced Synergistic Drug Combination PredictionabstractIdentifying synergistic anticancer drug combinations is a key challenge due to the vast number of potential drug pairs and the high cost of experimental screening. Recent advances leverage deep learning and graph neural networks (GNNs) to learn molecular representations directly from drug structures, but the limited number of unique drugs in available datasets restricts the effectiveness of such models. In this paper, we propose a framework that addresses this issue through a DDI-enhanced Deep Graph InfoMax pretraining strategy. Our approach captures structural and relational drug features by jointly maximizing local–global mutual information and incorporating drug–drug interaction prediction. A multi-level interaction model with semantic attention further enhances feature fusion, leading to improved synergy prediction performance. We compared our method with five advanced methods on two public datasets. The results demonstrate that the proposed method exhibits superior generalization ability. Xiaoyi Liang, Hongming Zhu, Xiaoli Zhu, Dongsheng Mao, Qin Liu 0004 |
SMC | 2 |
| 2025 | FIN-SIGN: A GNN-based Learning Model for Online Lending Fraud DetectionabstractWith the rapid development of Fintech, increasing fraudulent behaviors have posed a threat to the smooth functioning of online lending platforms, leading to substantial losses for financial institutions. Enhancing the fraud detection capability of these platforms has thus become an urgent need. In the lending network of PPDAI, a well-known lending platform, two key characteristics are observed in the user data: (1) The presence of indicative missing values in node features; (2) The presence of weak homophily within the network structure. However, in previous work, the widely used GNNs always rely on the homophily assumption, and popular GNN-based fraud detection methods overlook the utilization of missing values, which limits the performance of lending fraud detection. To address the above problems, in this paper, we propose a GNN-based model FIN-SIGN for online lending fraud detection. The proposed model leverages Missing Mask to capture indicative information from missing values, alleviates the weak homophily through structure augmentation, and finally identifies fraudulent users with a SIGN-based GNN detector. Experimental results on the PPDAI dataset DGraph-Fin demonstrates the effectiveness of FIN-SIGN. Xiaodi Song, Xiaoguo Wang, Hongming Zhu |
SMC | 4 |
| 2025 | Front-door causal attention for unbiased panoptic scene graph generation
Shuang Liang 0001, Baihua Liu, Shuwei Yan, Hongming Zhu |
Neurocomputing | 5 |
| 2025 | STGAN-CR: A Semantics-Aware Cloud Removal Network Integrating Swin Transformer and GANs for Remote Sensing Applications
Hongming Zhu, Zeju Wang, Manxin Xu, Jinfeng Jiang, Hongfei Fan, Qin Liu 0004, Bowen Du 0002 |
Int. J. Softw. Eng. Knowl. Eng. | 1 |
| 2025 | Event-Triggered Secure Control Under Aperiodic DoS AttacksabstractThis paper is focused on the event-based secure control issue for cyber-physical systems (CPSs) under aperiodic denial-of-service (DoS) attacks. Malicious DoS attacks disrupt the communication between the controller and the actuator. The finite attack resources of malicious attackers are taken into consideration, and the DoS attacks are characterized using an aperiodic model. In contrast to prior results, the present study tackles the issue of secure controller design by considering the attributes of the DoS attack, instead of employing a switched system approach to address the aforementioned concerns. More specifically, under aperiodic DoS attacks, sufficient criteria are established to guarantee that the closed-loop CPSs can achieve bounded stability. Then, within a time-varying attack period, the relationship between the attack active interval and the attack silent interval is derived. Without satisfying the derived conditions, the system’s stability will deteriorate. Moreover, an event-based secure control scheme under aperiodic DoS attacks is designed. To verify the efficacy of the derived theory, a wheeled mobile robot system under aperiodic DoS attacks is illustrated. Note to Practitioners—CPSs have been widely utilized in various domains, such as aerospace and intelligent transportation. However, the openness of networks provides attackers with numerous opportunities for malicious assaults, consequently leading to a degradation in system performance. Consequently, researching the security issues of CPSs under malicious attacks is of utmost urgency. This paper focuses on the issue of event-triggered secure control for CPSs in the presence of energy-constrained aperiodic DoS attacks. The event-triggered communication mechanism is introduced to reduce the computational burden. The criteria for ensuring the bounded stability of CPSs under aperiodic DoS attacks are proposed. The relationship between the attack active interval and the attack silent interval is derived, which is incorporated into the proposed criteria. A wheeled mobile robot system is given to validate the effectiveness of the proposed method. In the future, an active defense control method will be proposed to counter malicious attacks. Liyuan Yin, Chengwei Wu 0001, Lezhong Xu, Hongming Zhu, Xiangyu Shao, Weiran Yao, Jianxing Liu, Ligang Wu 0001 |
IEEE Trans Autom. Sci. Eng. | 4 |
| 2025 | Fusing Micro- and Macro-Scale Information to Predict Anticancer Synergistic Drug CombinationsabstractDrug combination therapy is highly regarded in cancer treatment. Computational methods offer a time- and cost-effective opportunity to explore the vast combination space. Although deep learning-based prediction methods lead the field, their generalization ability remains unsatisfactory. Few previous studies have the ability to finely characterize drugs and cell lines at both the micro-scale and macro-scale. Furthermore, the interaction of cross-scale information is often overlooked. These two points limit models' ability of predicting the synergism of drug combinations in cell lines. To address the issues, we propose a novel anticancer synergistic drug combination prediction method termed MMFSynergy in this article. The construction of MMFSynergy involves three phases. First, MMFSynergy pretrains two micro encoders and a macro graph encoder, which can capture micro- or macro-scale information from large volumes of unlabeled data and generate generic features for drugs and proteins. Second, it represents drugs and proteins by fusing cross-scale information through a self-supervised task. Finally, it employs a Transformer Encoder-based model to predict synergy scores, taking representations of drugs in the combinations and the associated proteins of cell lines as input. We compared our method with eight advanced methods across three typical scenarios based on two public datasets. The results consistently demonstrated that the proposed method's generalization ability outperforms six advanced methods'. We also conducted experiments including but not limited to ablation study and case study to further exhibit the effectiveness of MMFSynergy. Xiaowen Wang 0003, Hongming Zhu, Qi Liu 0019, Qin Liu 0004 |
IEEE J. Biomed. Health Informatics | 2 |
| 2025 | Switching-Based Moving Target Defense Control Against CyberattacksabstractThis article addresses the issue of security in cyber–physical systems (CPSs) in the context of malicious actuator false data injection (FDI) attacks. Building on a stochastic physical dynamics model, the proposed approach distinguishes itself by employing a moving target defense (MTD) strategy to enable proactive protection, which is an aspect rarely addressed in existing related works. The system model is formulated as a family of controllable submodels based on controllability. These controllable submodels are regarded as moving targets. A residual-based attack detector is introduced to justify whether an attack occurs or not. When an alarm is triggered, the current running controllable submodel is switched to another controllable one. Furthermore, an MTD-based security controller is devised to proactively mitigate actuator attacks. Sufficient conditions for the design of security control gains are formulated, using which the CPSs can preserve the mean-square exponential stability with the desired disturbance rejection level. Finally, the effectiveness of the proposed control strategy is demonstrated through a comparative simulation based on a practical physical system. Lezhong Xu, Hongming Zhu, Chengwei Wu 0001, Yabin Gao, Ligang Wu 0001 |
IEEE Trans. Syst. Man Cybern. Syst. | 2 |
| 2024 | RSTIE-KGC: A Relation Sensitive Textual Information Enhanced Knowledge Graph Completion ModelabstractNowadays, many knowledge graph completion models are proposed to assist the automatic construction of large knowledge graphs. While knowledge graph embedding models and textual information enhanced models are two tendencies in this area, they both suffer from some shortcomings, for example, relying too much on one single modal information may cause the limitation of performance. However, only a few works attempt to integrate multiple modalities. Besides, we found that the semantic similarity between head and tail entities correlates to the enhancing effect of textual information, and the semantic similarity is also related to relation types. We call this phenomenon relational sensitivity. To address these issues, we propose a relation sensitive textual information enhanced knowledge graph completion model (RSTIE-KGC). In our work, by integrating pre-trained language models (PLM) with knowledge graph embedding models, we fuse structural information and textual information, taking advantage of both topological and semantic features. Instead of finetuning the whole PLMs as existing models do, we choose a more efficient way, using frozen PLMs followed by an adapter to fit the text embeddings to our tasks, so that we can reduce training costs and enlarge the scale of negative samples, which maintains accuracy and effectiveness of our model. Based on the relational sensitivity, we propose our RelRank block, which selectively enhances textual information by calculating and filtering mean rank proportion (MRP) score for each relation type, thereby making better use of beneficial semantic information and reducing the noise and redundancy caused by textual information. The prediction process makes more refined use of textual information, as a result improving the accuracy of the model in the link prediction task. We conducted link prediction experiments on two real-world datasets. On FB15k-237, our model outperformed the current state-of-art textual information enhanced models in both MRR and Hit@k metrics. On WN18RR, our model also showed a stable prediction performance, and the results of both MRR and Hits@1 metrics were better than the most textual information enhanced models. Sapae Phyu, Qin Liu 0004, Bowen Du 0002, Hongming Zhu |
CSCWD | 6 |
| 2024 | Evidence-Based Commit Message Generation with Deep Learning Techniques (EvidenCoM)abstractContext. Automatic code commit message generation tools using deep learning techniques have gained significant attention in recent years. Although many experiments with these tools have been reported, there is no current evidence on which of them performs best. Objective. This project aims to provide evidence on the set of proposed tools. Method. We will conduct a secondary study, consisting of a systematic review that includes evidence synthesis. Results. We have identified the set of primary studies and extracted the information from them. The next steps include obtaining evidence from the extracted information. Sira Vegas, Xavier Ferré, Hongming Zhu |
ESEM | 3 |
| 2024 | STGAN-CR: A Swin Transformer-Enhanced GAN Framework for Effective Cloud Removal in Satellite ImageryabstractAdvancements in satellite remote sensing have enhanced Earth observation, enabling the acquisition of images crucial for various remote sensing applications.However, cloud cover degrades image quality and obstructs surface information.Traditional cloud removal techniques struggle to restore both low-level and high-level features, especially under complex conditions.To address these challenges, we propose STGAN-CR, a novel framework integrating Swin Transformer with Generative Adversarial Networks (GANs) to optimize image detail recovery.Leveraging the Swin Transformer's global modeling capabilities, our method enhances feature extraction and restoration, overcoming limitations of conventional models.We introduce a new evaluation metric focused on scene classification accuracy postde-clouding to better assess practical utility.Extensive experiments and ablation studies show that STGAN-CR outperforms existing models in visual quality and classification performance.These advancements offer an effective solution for enhancing the quality and utility of remote sensing images, balancing the restoration of both low-level and high-level features, and providing more meaningful de-clouded images for downstream applications. Hongming Zhu, Zeju Wang, Manxin Xu, Qin Liu 0004, Bowen Du 0002 |
SEKE | 1 |
| 2024 | DSESL: A Deep Stacking Ensemble Model for Synthetic Lethality PredictionabstractSynthetic lethality (SL) refers to the phenomenon that simultaneous mutation of two genes is lethal to cells, while mutation of either gene alone is not lethal. Exploiting this genetic interaction holds immense clinical potential for selectively killing cancer cells without harming normal cells. Given the vast genomic combinatorial space, relying solely on wet lab experiments for screening synthetic lethal gene pairs is impractical, leading to the emergence of various computational methods. Existing computational methods often rely on single-feature extraction methods or single data sources for prediction, resulting in poor predictive accuracy when faced with unseen genes. In this work, we propose a novel deep ensemble model for synthetic lethality prediction based on a stacking strategy (DSESL). Firstly, leveraging the publicly available SynLethKG knowledge graph, we learn gene embed dings at three different focus-levels: single-entity single-relation, single-entity multi-relation, and multi-entity multi-relation, constructing three sub-models for prediction from the knowledge graph. Additionally, we incorporate signaling pathway data and utilize graph neural network-based methods to construct a pathway sub-model. Finally, we adopt a stacking strategy-based ensemble approach to effectively integrate the prediction results from different sub-models. Based experimental results, our proposed DSESL model outperforms existing state-of-the-art SL prediction methods in all three prediction scenarios. The source code of DSESL is available at https://github.com/TOJSSE-iData/DSESL/. Xiaowen Wang 0003, Hongming Zhu, Qin Liu 0004 |
SMC | 4 |
| 2024 | Scribble-based complementary graph reasoning network for weakly supervised salient object detection
Shuang Liang 0001, Zhiqi Yan, Chi Xie 0001, Hongming Zhu, Jiewen Wang |
Comput. Vis. Image Underst. | 4 |
| 2024 | Security Analysis and Control Under Periodic DoS AttacksabstractThis article is focused on security analysis and control problems of cyber–physical systems (CPSs) under Denial-of-Service (DoS) attacks, which jam the controller-actuator channel. Considering the limited attack energy of malicious adversaries, DoS attacks are described by a periodic model. Different from existing results, both the security analysis and secure controller design problems are addressed based on the characteristics of DoS attack model rather than utilizing the switching system theory to solve the aforementioned problems. First, sufficient conditions are derived to ensure that the resultant closed-loop CPS under DoS attacks can preserve the exponential stability, and the critical value of the attack period is derived, below which the stability is deteriorated. Second, the relation between our proposed conditions and reinforcement learning-based control is established, based on which the security of reinforcement learning-based control can be evaluated effectively. Finally, both DoS attacks and external disturbances are considered in a unified framework, and sufficient conditions are proposed to evaluate the security of the closed-loop CPSs and design a secure controller. Finally, a mobile robot is adopted to validate the efficacy of the proposed methods. Liyuan Yin, Lezhong Xu, Fusheng Hou, Hongming Zhu, Houhua Jing, Xingjian Sun, Chengwei Wu 0001 |
IEEE Internet Things J. | 4 |
| 2024 | Secure Control for Cyber-Physical Systems Subject to Aperiodic DoS AttacksabstractThis article addresses the secure control issue for cyber-physical systems (CPSs) under aperiodic denial-of-service (DoS) attacks. Malicious DoS attacks disrupt the communication between the controller and the actuator. The finite attack resources of malevolent attackers are taken into consideration, and the DoS attacks are characterized using an aperiodic model. In contrast to prior results, the present study tackles the issues of security analysis and secure controller design by considering the attributes of the DoS attacks, instead of employing a switched system approach to address the aforementioned concerns. First, under aperiodic DoS attacks, sufficient criteria are established to guarantee that the closed-loop CPSs can attain asymptotical stability. Second, within a time-varying attack period, the relationship between the attack active interval and the attack silent interval is derived, if this relation is not satisfied, the stability of the system will deteriorate. Finally, a unified framework is developed to address the external disturbances and aperiodic DoS attacks. Sufficient criteria are introduced for evaluating the security of CPSs, and a corresponding secure control scheme is also designed. To verify the efficacy of the derived theory, a wheeled mobile robot system under aperiodic DoS attacks is illustrated. Liyuan Yin, Chengwei Wu 0001, Hongming Zhu, Quanqi Zhang |
IEEE Trans. Syst. Man Cybern. Syst. | 3 |
| 2023 | STIP: A Seasonal Trend Integrated Predictor for Blood Glucose Level in Time Series
Weixiong Rao, Guangda Yang, Qinpei Zhao, Hongming Zhu, Xuefeng Li 0001, Yinjia Zhang |
ADMA (5) | 5 |
| 2023 | HetBiSyn: Predicting Anticancer Synergistic Drug Combinations Featuring Bi-perspective Drug Embedding with Heterogeneous Data
Hongming Zhu, Xiaowen Wang 0003, Qin Liu 0004 |
ISBRA | 2 |
| 2023 | MTN: A Multi-Scale Transformer Network for Different Resolution Remote Sensing Images Change DetectionabstractIn the field of change detection, detecting changes in images with different resolutions is crucial for both long-term interval scenes and scenarios that require rapid detection. However, existing methods face two main issues. Firstly, they require more stringent prior knowledge. The SPM-based methods require pixel-level class labeling of high-resolution(HR) images, while the approaches based on image super-resolution require HR images corresponding to low-resolutionr(LR) images. Such prior knowledge is either costly for labeling or difficult to meet in realistic scenarios. The second is that redundant error accumulation affects detection accuracy. Whether in traditional sub-pixel mapping(SPM) methods or deep learning methods based on image super-resolution, the final detection results are obtained after generating HR images from LR images. The redundant error produced in this step will be accumulated and affect the final detection results. Although the unsupervised methods do not have this problem, the detection accuracy is not as good as that of the supervised. To address these issues, we propose a multi-scale Transformer network(MTN). This model first uses a multi-scale feature extractor(MFE) to extract multi-scale features and perform scale matching at the feature level. Then, the Transformer is used to extract long-range relationships of ground objects on the multi-scale features to enhance the features. Finally, the multi-scale features are fused, and a classifier composed of a convolutional network is used to obtain binary change detection results. In addition, we consider that the edges of objects may be affected during the scale matching process, and introduce a CEBoundary Loss to better detect object edges. The results on the LEVIR and Google datasets demonstrate the effectiveness of our proposed method. The source code of MTN is available at https://github.com/Gavin-debug/MultiResolutionCD. Hongming Zhu, Guodong Wu, Zeju Wang, Manxin Xu, Qin Liu 0004, Sicong Liu 0001, Bowen Du 0002 |
SMC | 1 |
| 2023 | A complete graph-based approach with multi-task learning for predicting synergistic drug combinationsabstractMOTIVATION: Drug combination therapy shows significant advantages over monotherapy in cancer treatment. Since the combinational space is difficult to be traversed experimentally, identifying novel synergistic drug combinations based on computational methods has become a powerful tool for pre-screening. Among them, methods based on deep learning have far outperformed other methods. However, most deep learning-based methods are unstable and will give inconsistent predictions even by simply changing the input order of drugs. In addition, the insufficient experimental data of drug combination screening limits the generalization ability of existing models. These problems prevent the deep learning-based models from being in service. RESULTS: In this article, we propose CGMS to address the above problems. CGMS models a drug combination and a cell line as a heterogeneous complete graph, and generates the whole-graph embedding to characterize their interaction by leveraging the heterogeneous graph attention network. Based on the whole-graph embedding, CGMS can make a stable, order-independent prediction. To enhance the generalization ability of CGMS, we apply the multi-task learning technique to train the model on drug synergy prediction task and drug sensitivity prediction task simultaneously. We compare CGMS's generalization ability with six state-of-the-art methods on a public dataset, and CGMS significantly outperforms other methods in the leave-drug combination-out scenario, as well as in the leave-cell line-out and leave-drug-out scenarios. We further present the benefit of eliminating the order dependency and the discrimination power of whole-graph embeddings, interpret the rationality of the attention mechanism, and verify the contribution of multi-task learning. AVAILABILITY AND IMPLEMENTATION: The code of CGMS is available via https://github.com/TOJSSE-iData/CGMS. Hongming Zhu, Danyi Chen |
Bioinform. | 2 |
| 2023 | Predicting anticancer synergistic drug combinations based on multi-task learningabstractBACKGROUND: The discovery of anticancer drug combinations is a crucial work of anticancer treatment. In recent years, pre-screening drug combinations with synergistic effects in a large-scale search space adopting computational methods, especially deep learning methods, is increasingly popular with researchers. Although achievements have been made to predict anticancer synergistic drug combinations based on deep learning, the application of multi-task learning in this field is relatively rare. The successful practice of multi-task learning in various fields shows that it can effectively learn multiple tasks jointly and improve the performance of all the tasks. METHODS: In this paper, we propose MTLSynergy which is based on multi-task learning and deep neural networks to predict synergistic anticancer drug combinations. It simultaneously learns two crucial prediction tasks in anticancer treatment, which are synergy prediction of drug combinations and sensitivity prediction of monotherapy. And MTLSynergy integrates the classification and regression of prediction tasks into the same model. Moreover, autoencoders are employed to reduce the dimensions of input features. RESULTS: Compared with the previous methods listed in this paper, MTLSynergy achieves the lowest mean square error of 216.47 and the highest Pearson correlation coefficient of 0.76 on the drug synergy prediction task. On the corresponding classification task, the area under the receiver operator characteristics curve and the area under the precision-recall curve are 0.90 and 0.62, respectively, which are equivalent to the comparison methods. Through the ablation study, we verify that multi-task learning and autoencoder both have a positive effect on prediction performance. In addition, the prediction results of MTLSynergy in many cases are also consistent with previous studies. CONCLUSION: Our study suggests that multi-task learning is significantly beneficial for both drug synergy prediction and monotherapy sensitivity prediction when combining these two tasks into one model. The ability of MTLSynergy to discover new anticancer synergistic drug combinations noteworthily outperforms other state-of-the-art methods. MTLSynergy promises to be a powerful tool to pre-screen anticancer synergistic drug combinations. Danyi Chen, Xiaowen Wang 0003, Hongming Zhu, Yizhi Jiang, Qi Liu 0019, Qin Liu 0004 |
BMC Bioinform. | 3 |
| 2023 | Fleet Rebalancing for Expanding Shared e-Mobility Systems: A Multi-Agent Deep Reinforcement Learning ApproachabstractThe electrification of shared mobility has become popular across the globe. Many cities have their new shared e-mobility systems deployed, with continuously expanding coverage from central areas to the city edges. A key challenge in the operation of these systems is fleet rebalancing, i.e., how EVs should be repositioned to better satisfy future demand. This is particularly challenging in the context of expanding systems, because i) the range of the EVs is limited while charging time is typically long, which constrain the viable rebalancing operations; and ii) the EV stations in the system are dynamically changing, i.e., the legitimate targets for rebalancing operations can vary over time. We tackle these challenges by first investigating rich sets of data collected from a real-world shared e-mobility system for one year, analyzing the operation model, usage patterns and expansion dynamics of this new mobility mode. With the learned knowledge we design a high-fidelity simulator, which is able to abstract key operation details of EV sharing at fine granularity. Then we model the rebalancing task for shared e-mobility systems under continuous expansion as a Multi-Agent Reinforcement Learning (MARL) problem, which directly takes the range and charging properties of the EVs into account. We further propose a novel policy optimization approach with action cascading, which is able to cope with the expansion dynamics and solve the formulated MARL. We evaluate the proposed approach extensively, and experimental results show that our approach outperforms the state-of-the-art, offering significant performance gain in both satisfied demand and net revenue. Man Luo 0001, Bowen Du 0002, Tianyou Song, Kun Li 0030, Hongming Zhu, Mark H. Birkin, Hongkai Wen 0001 |
IEEE Trans. Intell. Transp. Syst. | 6 |
| 2022 | PRODeepSyn: predicting anticancer synergistic drug combinations by embedding cell lines with protein-protein interaction networkabstractAlthough drug combinations in cancer treatment appear to be a promising therapeutic strategy with respect to monotherapy, it is arduous to discover new synergistic drug combinations due to the combinatorial explosion. Deep learning technology holds immense promise for better prediction of in vitro synergistic drug combinations for certain cell lines. In methods applying such technology, omics data are widely adopted to construct cell line features. However, biological network data are rarely considered yet, which is worthy of in-depth study. In this study, we propose a novel deep learning method, termed PRODeepSyn, for predicting anticancer synergistic drug combinations. By leveraging the Graph Convolutional Network, PRODeepSyn integrates the protein-protein interaction (PPI) network with omics data to construct low-dimensional dense embeddings for cell lines. PRODeepSyn then builds a deep neural network with the Batch Normalization mechanism to predict synergy scores using the cell line embeddings and drug features. PRODeepSyn achieves the lowest root mean square error of 15.08 and the highest Pearson correlation coefficient of 0.75, outperforming two deep learning methods and four machine learning methods. On the classification task, PRODeepSyn achieves an area under the receiver operator characteristics curve of 0.90, an area under the precision-recall curve of 0.63 and a Cohen's Kappa of 0.53. In the ablation study, we find that using the multi-omics data and the integrated PPI network's information both can improve the prediction results. Additionally, the case study demonstrates the consistency between PRODeepSyn and previous studies. Xiaowen Wang 0003, Hongming Zhu, Yizhi Jiang, Yunjie Li, Qi Liu 0019, Qin Liu 0004 |
Briefings Bioinform. | 2 |
| 2022 | Deployment Optimization for Shared e-Mobility Systems With Multi-Agent Deep Neural SearchabstractShared e-mobility services have been widely tested and piloted in cities across the globe, and already woven into the fabric of modern urban planning. This paper studies a practical yet important problem in those systems: how to deploy and manage their infrastructure across space and time, so that the services areubiquitousto the users whilesustainablein profitability. However, in real-world systems evaluating the performance of different deployment strategies and then finding the optimal plan is prohibitively expensive, as it is often infeasible to conduct many iterations of trial-and-error. We tackle this by designing a high-fidelity simulation environment, which abstracts the key operation details of the shared e-mobility systems at fine-granularity, and is calibrated using data collected from the real-world. This allows us to try out arbitrary deployment plans to learn the optimal given specific context, before actually implementing any in the real-world systems. In particular, we propose a novel multi-agent neural search approach, in which we design a hierarchical controller to produce tentative deployment plans. The generated deployment plans are then tested using a multi-simulation paradigm, i.e., evaluated in parallel, where the results are used to train the controller with deep reinforcement learning. With this closed loop, the controller can be steered to have higher probability of generating better deployment plans in future iterations. The proposed approach has been evaluated extensively in our simulation environment, and experimental results show that it outperforms baselines e.g., human knowledge, and state-of-the-art heuristic-based optimization approaches in both service coverage and net revenue. Man Luo 0001, Bowen Du 0002, Konstantin Klemmer, Hongming Zhu, Hongkai Wen 0001 |
IEEE Trans. Intell. Transp. Syst. | 4 |
| 2021 | CtnR: Compress-then-Reconstruct Approach for Multimodal Abstractive SummarizationabstractWith the rapid growth of multimodal data in social medias and the huge requirement of short but abundant information. Multimodal summarization has drawn much attention in both industry and academia. It usually obtains textual summary from multiple sources by computer vision or nature language processing technologies. However, there are also two challenges in modeling such task: 1) The feature representation is limited by the non-alignment among multimodal data; 2) Massive parallel data is required during training, which is time-consuming and laborious. In this paper, we introduce an unsupervised architecture (Compress-then-Reconstruct, CtnR) to generate the summary in an end-to-end manner and a Cross-Modal Transformer module (CMTrans) to fuse the multimodal non-alignment information. Comprehensive experiments show that the proposed CtnR framework with CMTrans outperforms mainstream unsupervised approaches in terms of BLEU, ROUGE and relevance scores on MSMO and Youtube News dataset, which increase 8.82% and 11.01% on average respectively. Chenxi Zhang 0001, Zijian Zhang 0008, Qin Liu 0004, Hongming Zhu |
IJCNN | 5 |
| 2020 | Rebalancing Expanding EV Sharing Systems with Deep Reinforcement LearningabstractElectric Vehicle (EV) sharing systems have recently experienced unprecedented growth across the world. One of the key challenges in their operation is vehicle rebalancing, i.e., repositioning the EVs across stations to better satisfy future user demand. This is particularly challenging in the shared EV context, because i) the range of EVs is limited while charging time is substantial, which constrains the rebalancing options; and ii) as a new mobility trend, most of the current EV sharing systems are still continuously expanding their station networks, i.e., the targets for rebalancing can change over time. To tackle these challenges, in this paper we model the rebalancing task as a Multi-Agent Reinforcement Learning (MARL) problem, which directly takes the range and charging properties of the EVs into account. We propose a novel approach of policy optimization with action cascading, which isolates the non-stationarity locally, and use two connected networks to solve the formulated MARL. We evaluate the proposed approach using a simulator calibrated with 1-year operation data from a real EV sharing system. Results show that our approach significantly outperforms the state-of-the-art, offering up to 14% gain in order satisfied rate and 12% increase in net revenue. Man Luo 0001, Tianyou Song, Kun Li 0030, Hongming Zhu, Bowen Du 0002, Hongkai Wen 0001 |
IJCAI | 5 |
| 2020 | Modeling Relation Path for Knowledge Graph via Dynamic Projection
Hongming Zhu, Yizhi Jiang, Xiaowen Wang 0003, Hongfei Fan, Qin Liu 0004, Bowen Du 0002 |
SEKE | 1 |
| 2019 | Generating commit messages from diffs using pointer-generator networkabstractThe commit messages in source code repositories are valuable but not easy to be generated manually in time for tracking issues, reporting bugs, and understanding codes. Recently published works indicated that the deep neural machine translation approaches have drawn considerable attentions on automatic generation of commit messages. However, they could not deal with out-of-vocabulary (OOV) words, which are essential context-specific identifiers such as class names and method names in code diffs. In this paper, we propose PtrGNCMsg, a novel approach which is based on an improved sequence-to-sequence model with the pointer-generator network to translate code diffs into commit messages. By searching the smallest identifier set with the highest probability, PtrGNCMsg outperforms recent approaches based on neural machine translation, and first enables the prediction of OOV words. The experimental results based on the corpus of diffs and manual commit messages from the top 2,000 Java projects in GitHub show that PtrGNCMsg outperforms the state-of-the-art approach with improved BLEU by 1.02, ROUGE-1 by 4.00 and ROUGE-L by 3.78, respectively. Qin Liu 0004, Hongming Zhu, Hongfei Fan, Bowen Du 0002 |
MSR | 3 |
| 2019 | Multistep Flow Prediction on Car-Sharing Systems: A Multi-Graph Convolutional Neural Network with Attention MechanismabstractMultistep flow prediction is an essential task for the car-sharing systems.An accurate flow prediction model can help system operators to pre-allocate the cars to meet the demand of users.However, this task is challenging due to the complex spatial and temporal relations among stations.Existing works only considered temporal relations (e.g., using LSTM) or spatial relations (e.g., using CNN) independently.In this paper, we propose an attention multi-graph convolutional sequenceto-sequence model (AMGC-Seq2Seq), which is a novel deep learning model for multistep flow prediction.The proposed model uses the encoder-decoder architecture, wherein the encoder part, spatial and temporal relations are encoded simultaneously.Then the encoded information is passed to the decoder to generate multistep outputs.In this work, specific multiple graphs are constructed to reflect spatial relations from different aspects, and we model them by using the proposed multi-graph convolution.Attention mechanism is also used to capture the important relations from previous information.Experiments on a large-scale real-world car-sharing dataset demonstrate the effectiveness of our approach over state-of-the-art methods. Qin Liu 0004, Hongming Zhu, Hongfei Fan, Tianyou Song, Bowen Du 0002 |
SEKE | 3 |
| 2019 | Multistep Flow Prediction on Car-Sharing Systems: A Multi-Graph Convolutional Neural Network with Attention MechanismabstractMultistep flow prediction is an essential task for the car-sharing systems. An accurate flow prediction model can help system operators to pre-allocate the cars to meet the demand of users. However, this task is challenging due to the complex spatial and temporal relations among stations. Existing works only considered temporal relations (e.g. using LSTM) or spatial relations (e.g. using CNN) independently. In this paper, we propose an attention to multi-graph convolutional sequence-to-sequence model (AMGC-Seq2Seq), which is a novel deep learning model for multistep flow prediction. The proposed model uses the encoder–decoder architecture, wherein the encoder part, spatial and temporal relations are encoded simultaneously. Then the encoded information is passed to the decoder to generate multistep outputs. In this work, specific multiple graphs are constructed to reflect spatial relations from different aspects, and we model them by using the proposed multi-graph convolution. Attention mechanism is also used to capture the important relations from previous information. Experiments on a large-scale real-world car-sharing dataset demonstrate the effectiveness of our approach over state-of-the-art methods. Hongming Zhu, Qin Liu 0004, Hongfei Fan, Tianyou Song, Bowen Du 0002 |
Int. J. Softw. Eng. Knowl. Eng. | 1 |
| 2017 | Extending Mobile App Analytics for Usability Test Logging
Xavier Ferré, Elena Villalba, Héctor Julio, Hongming Zhu |
INTERACT (3) | 4 |
| 2014 | Optimizing Non-orthogonal Space Distance Using PSO in Software Cost EstimationabstractThis paper proposes a method to optimize the Nonorthogonal Space Distance (NoSD) based on the Particle Swarm Optimization (PSO) algorithm so as to increase estimation accuracy in analogy-based software cost estimation. NoSD is a measure of projects similarity that uses a matrix defined based on mutual information to take both feature redundancies and feature weights into distance computation. We assumes that such definition based only on mutual information between features can hardly describe real-life software projects accurately, so we proposes this new method and improves NoSD using optimization techniques. In this proposed method, the matrix in NoSD is optimized by the PSO algorithm with the goal of minimizing estimation error at training stage. Based on this optimized matrix, which better fits real-life software projects, the distance definition can measure projects similarity more accurately and thus can greatly improve the estimation accuracy. Experiments have been conducted on two real-life software projects datasets (Desharnais and ISBSG R8) using the proposed method along with several other widely used methods including Euclidean, Manhattan, Minkowski, Mahalanobis, NoSD, and weighted Euclidean distance. Results show that this method brings notable improvements in estimation accuracy based on three widely used evaluation metrics: MMRE, MdMRE, and PRED(0.25). Xiaoyuan Chu, Jiakai Xiao, Hongming Zhu |
COMPSAC | 4 |
| 2014 | A Mutual Information-Based Hybrid Feature Selection Method for Software Cost Estimation Using Feature ClusteringabstractFeature selection methods are designed to obtain the optimal feature subset from the original features to give the most accurate prediction. So far, supervised and unsupervised feature selection methods have been discussed and developed separately. However, these two methods can be combined together as a hybrid feature selection method for some data sets. In this paper, we propose a mutual information-based (MI-based) hybrid feature selection method using feature clustering. In the unsupervised learning stage, the original features are grouped into several clusters based on the feature similarity to each other with agglomerative hierarchical clustering. Then in the supervised learning stage, the feature in each cluster that can maximize the feature similarity with the response feature which represents the class label is selected as the representative feature. These representative features compose the feature subset. Our contribution includes 1)the newly proposed feature selection method and 2)the application of feature clustering for software cost estimation. The proposed method employs wrapper approaches, so it can evaluate the prediction performance of each feature subset to determine the optimal one. The experimental results in software cost estimation demonstrate that the proposed method can outperform at least 11.5% and 14.8% than the supervised feature selection method INMIFS and mRMRFS in ISBSG R8 and Desharnais data set in terms of PRED (0.25) value. Qin Liu 0004, Shihai Shi, Hongming Zhu, Jiakai Xiao |
COMPSAC | 3 |
| 2014 | A Supervised Feature Selection Algorithm through Minimum Spanning Tree ClusteringabstractIn different types of feature selection algorithms, feature clustering is an emerging subset generation paradigm. In this paper, a Minimum spanning tree based Feature Clustering (MFC) algorithm is proposed. In the algorithm, an information-theoretic based measure, i.e., Variation of information, is utilized as the feature redundancy and relevance metric. At the clustering phase, the sum of pair wise feature redundancy is minimized. Then, a representative feature is selected from each cluster, where the relevance between representative features and the target label is maximized. The algorithm is supervised since it is designed for various supervised learning problems, such as classification and regression. The proposed MFC is compared with three conventional feature selection algorithms, two of which are also feature clustering method. The MFC obtains well separated feature clusters in the experiment and considerable better classification accuracies applied on several real data sets. Jingxiao Zhang, Jiakai Xiao, Hongming Zhu, Qinpei Zhao |
ICTAI | 4 |