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Nir Kutsky

dblp:370/4876 · DBLP profile ↗
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1ranked-venue papers
0as first author
1since 2021 · last 2023
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 56% Medical and health informatics · 44%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Medical and health informatics
drug safety
0.712023
Pretrained transformer models for predicting the withdrawal of drugs from the market · Bioinform. 2023
Bioinformatics and computational biology › drug discovery
drug side effect prediction
0.712023
Pretrained transformer models for predicting the withdrawal of drugs from the market · Bioinform. 2023
Bioinformatics and computational biology
drug discovery
0.212023
Pretrained transformer models for predicting the withdrawal of drugs from the market · Bioinform. 2023

Methods — techniques the papers use, named apart from their topics

pretrained transformer language model · 0.7graph-based model · 0.7
YearPublicationVenuePosition
2023 Pretrained transformer models for predicting the withdrawal of drugs from the market
abstract
MOTIVATION: The process of drug discovery is notoriously complex, costing an average of 2.6 billion dollars and taking ∼13 years to bring a new drug to the market. The success rate for new drugs is alarmingly low (around 0.0001%), and severe adverse drug reactions (ADRs) frequently occur, some of which may even result in death. Early identification of potential ADRs is critical to improve the efficiency and safety of the drug development process. RESULTS: In this study, we employed pretrained large language models (LLMs) to predict the likelihood of a drug being withdrawn from the market due to safety concerns. Our method achieved an area under the curve (AUC) of over 0.75 through cross-database validation, outperforming classical machine learning models and graph-based models. Notably, our pretrained LLMs successfully identified over 50% drugs that were subsequently withdrawn, when predictions were made on a subset of drugs with inconsistent labeling between the training and test sets. AVAILABILITY AND IMPLEMENTATION: The code and datasets are available at https://github.com/eyalmazuz/DrugWithdrawn.
Eyal Mazuz, Guy Shtar, Nir Kutsky, Lior Rokach, Bracha Shapira
Bioinform.3