Learning shared structure across environments facilitates rapid learning and adaptive behavior in neural systems. This has been widely demonstrated and applied in machine learning to train models that are capable of generalizing to novel settings. However, there has been limited work exploiting the shared structure in neural activity during similar tasks for learning latent dynamics from neural recordings. Existing approaches are designed to infer dynamics from a single dataset and cannot be readily adapted to account for statistical heterogeneities across recordings. In this work, we hypothesize that similar tasks admit a corresponding family of related solutions and propose a novel approach for meta-learning this solution space from task-related neural activity of trained animals. Specifically, we capture the variabilities across recordings on a low-dimensional manifold which concisely parametrizes this family of dynamics, thereby facilitating rapid learning of latent dynamics given new recordings. We demonstrate the efficacy of our approach on few-shot reconstruction and forecasting of synthetic dynamical systems, and neural recordings from the motor cortex during different arm reaching tasks.

Large scale inference models are widely used in neuroscience to extract latent representations from high-dimensional neural recordings. Due to the statistical heterogeneities between sessions and animals, a new model is trained from scratch to infer the underlying dynamics for each new dataset. This is computationally expensive and does not fully leverage all the available data. Moreover, as these models get more complex, they can be challenging to train. In parallel, it is becoming common to use pre-trained models in the machine learning community for few shot and transfer learning. One major hurdle that prevents the re-use of generative models in neuroscience is the complex spatio-temporal structure of neural dynamics within and across animals. Interestingly, the underlying dynamics identified from different datasets on the same task are qualitatively similar. In this work, we exploit this observation and propose a source-free and unsupervised alignment approach that utilizes the learnt dynamics and enables the re-use of trained generative models. We validate our approach on simulations and show the efficacy of the alignment on neural recordings from the motor cortex obtained during a reaching task.