Demo Data from VLDB 2026 / reviewers in the wild / expert
Constantin Bogdan Ciambur
dblp:425/3692
· DBLP profile ↗
1ranked-venue papers
0as first author
1since 2021 · last 2024
0000-0001-7387-1366ORCID · reported
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 5 heaviest of 5, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › structural bioinformatics › ligand binding site analysis
binding pocket prediction |
0.8 | 1 | 2024 | Protein interaction explorer (PIE): a comprehensive platform for navigating protein-protein interactions and ligand binding pockets · Bioinform. 2024 |
Bioinformatics and computational biology
drug discovery |
0.8 | 1 | 2024 | Protein interaction explorer (PIE): a comprehensive platform for navigating protein-protein interactions and ligand binding pockets · Bioinform. 2024 |
Bioinformatics and computational biology › protein analysis › protein-protein interaction
protein-protein interaction analysis |
0.8 | 1 | 2024 | Protein interaction explorer (PIE): a comprehensive platform for navigating protein-protein interactions and ligand binding pockets · Bioinform. 2024 |
Bioinformatics and computational biology
structural bioinformatics |
0.8 | 1 | 2024 | Protein interaction explorer (PIE): a comprehensive platform for navigating protein-protein interactions and ligand binding pockets · Bioinform. 2024 |
Bioinformatics and computational biology
protein structure analysis |
0.2 | 1 | 2024 | Protein interaction explorer (PIE): a comprehensive platform for navigating protein-protein interactions and ligand binding pockets · Bioinform. 2024 |
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2024 | Protein interaction explorer (PIE): a comprehensive platform for navigating protein-protein interactions and ligand binding pocketsabstractSUMMARY: Protein Interaction Explorer (PIE) is a new web-based tool integrated to our database iPPI-DB, specifically crafted to support structure-based drug discovery initiatives focused on protein-protein interactions (PPIs). Drawing upon extensive structural data encompassing thousands of heterodimer complexes, including those with successful ligands, PIE provides a comprehensive suite of tools dedicated to aid decision-making in PPI drug discovery. PIE enables researchers/bioinformaticians to identify and characterize crucial factors such as the presence of binding pockets or functional binding sites at the interface, predicting hot spots, and foreseeing similar protein-embedded pockets for potential repurposing efforts. AVAILABILITY AND IMPLEMENTATION: PIE is user-friendly and readily accessible at https://ippidb.pasteur.fr/targetcentric/. It relies on the NGL visualizer. Fabien Mareuil, Alexandra Moine-Franel, Anuradha Kar, Michael Nilges, Constantin Bogdan Ciambur, Olivier Sperandio |
Bioinform. | 5 |