Demo Data from VLDB 2026 / reviewers in the wild / expert
Injae Chung
dblp:430/2352
· DBLP profile ↗
1ranked-venue papers
0as first author
1since 2021 · last 2026
0000-0002-2902-4677ORCID · reported
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1 · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% | |
| Artificial intelligence
1 paper |
3D vision · 100% |
Topics — the 4 heaviest of 4, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › protein structure prediction
protein complex structure prediction |
1.0 | 1 | 2026 | IgPose: a generative data-augmented pipeline for robust immunoglobulin-antigen binding prediction · Bioinform. 2026 |
Bioinformatics and computational biology
protein-protein interaction prediction |
1.0 | 1 | 2026 | IgPose: a generative data-augmented pipeline for robust immunoglobulin-antigen binding prediction · Bioinform. 2026 |
Bioinformatics and computational biology
structural bioinformatics |
1.0 | 1 | 2026 | IgPose: a generative data-augmented pipeline for robust immunoglobulin-antigen binding prediction · Bioinform. 2026 |
Computer vision › 3D vision
geometric deep learning |
0.3 | 1 | 2026 | IgPose: a generative data-augmented pipeline for robust immunoglobulin-antigen binding prediction · Bioinform. 2026 |
Methods — techniques the papers use, named apart from their topics
generative data augmentation · 2.0gated recurrent unit · 2.0equivariant graph neural network · 2.0ESM-2 embeddings · 2.0
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | IgPose: a generative data-augmented pipeline for robust immunoglobulin-antigen binding predictionabstractMOTIVATION: Predicting immunoglobulin-antigen (Ig-Ag) binding remains a significant challenge due to the paucity of experimentally resolved complexes and the limited accuracy of de novo Ig structure prediction. RESULTS: We introduce IgPose, a generalizable framework for Ig-Ag pose identification and scoring, built on a generative data-augmentation pipeline. To mitigate data scarcity, we constructed the Structural Immunoglobulin Decoy Database (SIDD), a comprehensive repository of high-fidelity synthetic decoys. IgPose integrates equivariant graph neural networks, ESM-2 embeddings, and gated recurrent units to synergistically capture both geometric and evolutionary features. We implemented interface-focused k-hop sampling with biologically guided pooling to enhance generalization across diverse interfaces. The framework comprises two sub-networks-IgPoseClassifier for binding pose discrimination and IgPoseScore for DockQ score estimation-and achieves robust performance on curated internal test sets and the CASP-16 benchmark compared to physics and deep learning baselines. IgPose serves as a versatile computational tool for high-throughput antibody discovery pipelines by providing accurate pose filtering and ranking. AVAILABILITY AND IMPLEMENTATION: IgPose is available on GitHub (https://github.com/arontier/igpose). Tien-Cuong Bui, Injae Chung, Junsu Ko |
Bioinform. | 2 |