VLDB 2026 Research / reviewers in the wild / expert
V. V. Shamin
dblp:48/3152
· DBLP profile ↗
1ranked-venue papers
0as first author
0since 2021 · last 1994
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 1 heaviest of 1, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology › RNA biology › RNA processing
polyadenylation site prediction |
0.0 | 1 | 1994 | Construction of a generalized consensus matrix for recognition of vertebrate pre-mRNA 3'-terminal processing sites · Comput. Appl. Biosci. 1994 |
Methods — techniques the papers use, named apart from their topics
multiplicative scoring · 0.0consensus matrix · 0.0
| Year | Publication | Venue | Position |
|---|---|---|---|
| 1994 | Construction of a generalized consensus matrix for recognition of vertebrate pre-mRNA 3'-terminal processing sitesabstractUsing a set of sequences of 63 cleavage/polyadenylation sites of vertebrate pre-mRNA, a generalized consensus matrix was constructed. The elements of the matrix were the absolute frequencies of oligonucleotides of length l at the ith position of sites. The cleavage point of each site was assigned the same position number. To recognize a polyadenylation site in a nucleotide sequence, a multiplicative measure was obtained using the elements of the generalized consensus matrix as weight factors. For any omega-long fragment of a nucleotide sequence, the estimated value of the functional mu was compared with the threshold value mu*. Based on the results obtained, we determined whether or not the given fragment is a processing site. Yury V. Kondrakhin, V. V. Shamin, Nikolay A. Kolchanov |
Comput. Appl. Biosci. | 2 |