VLDB 2026 Research / reviewers in the wild / expert
E. S. Shpigelman
dblp:48/5947
· DBLP profile ↗
1ranked-venue papers
1as first author
0since 2021 · last 1993
—ORCID · none
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
1 paper |
Bioinformatics and computational biology · 100% |
Topics — the 2 heaviest of 2, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Bioinformatics and computational biology
sequence analysis |
0.0 | 1 | 1993 | CURVATURE: software for the analysis of curved DNA · Comput. Appl. Biosci. 1993 |
Bioinformatics and computational biology › structural bioinformatics › nucleic acid structure analysis
DNA structure modeling |
0.0 | 1 | 1993 | CURVATURE: software for the analysis of curved DNA · Comput. Appl. Biosci. 1993 |
Methods — techniques the papers use, named apart from their topics
nearest-neighbor wedge model · 0.0
| Year | Publication | Venue | Position |
|---|---|---|---|
| 1993 | CURVATURE: software for the analysis of curved DNAabstractSoftware is presented to plot the sequence-dependent spatial trajectory of the DNA double helix and/or distribution of curvature along the DNA molecule. The nearest-neighbor wedge model is implemented to calculate overall DNA path using local helix parameters: helix twist angle, wedge (deflection) angle and direction (of deflection) angle. The procedures described proved to be very convenient as tools for investigation of a relationship between overall DNA curvature and its gel electrophoretic mobility. All parameters of the model had been estimated from experimental data. Using these wedge parameters the program takes, as input, any DNA sequence and calculates the likely degree of curvature at each point along the molecule. This information is displayed both graphically and in the form of simplified representations of curved double helices. The Software, CURVATURE, can thus be used to investigate possible roles of curvature in modulation of gene expression and for location of curved portions of DNA, which may play an important role in sequence-specific protein--DNA interactions. E. S. Shpigelman, Edward N. Trifonov, Alexander Bolshoy |
Comput. Appl. Biosci. | 1 |