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Taiga Abe

dblp:54/11239 · DBLP profile ↗
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2ranked-venue papers
1as first author
1since 2021 · last 2022
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 2 · 1 first-author · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
2 papers
Trustworthy machine learning · 45% Probabilistic and Bayesian machine learning · 20% Deep learning architectures and training · 20%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Medical and health informatics · 50% Bioinformatics and computational biology · 50%

Topics — the 10 heaviest of 10, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Kernel, tree and ensemble methods › ensemble learning
deep ensembles
0.612022
Deep Ensembles Work, But Are They Necessary? · NeurIPS 2022
Machine learning › Trustworthy machine learning › robustness
out-of-distribution detection
0.612022
Deep Ensembles Work, But Are They Necessary? · NeurIPS 2022
Machine learning › Trustworthy machine learning
robustness
0.612022
Deep Ensembles Work, But Are They Necessary? · NeurIPS 2022
Machine learning › Trustworthy machine learning
uncertainty estimation
0.612022
Deep Ensembles Work, But Are They Necessary? · NeurIPS 2022
Machine learning › Deep learning architectures and training
autoencoder
0.412019
BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos · NeurIPS 2019
Machine learning › Probabilistic and Bayesian machine learning › structured models › latent variable model › hidden markov model
autoregressive hidden markov model
0.412019
BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos · NeurIPS 2019
Machine learning › Deep learning architectures and training › autoencoder
convolutional autoencoder
0.412019
BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos · NeurIPS 2019
Machine learning › Probabilistic and Bayesian machine learning › structured models
latent variable model
0.412019
BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos · NeurIPS 2019
Bioinformatics and computational biology › computational neuroscience
neural decoding
0.412019
BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos · NeurIPS 2019
Medical and health informatics › neuroimaging
neuroimaging analysis
0.412019
BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos · NeurIPS 2019

Methods — techniques the papers use, named apart from their topics

convolutional autoencoder · 0.8bayesian decoding · 0.8autoregressive hidden markov model · 0.8neural network scaling · 0.6deep ensembles · 0.6
YearPublicationVenuePosition
2022 Deep Ensembles Work, But Are They Necessary?
abstract
Ensembling neural networks is an effective way to increase accuracy, and can often match the performance of individual larger models. This observation poses a natural question: given the choice between a deep ensemble and a single neural network with similar accuracy, is one preferable over the other? Recent work suggests that deep ensembles may offer distinct benefits beyond predictive power: namely, uncertainty quantification and robustness to dataset shift. In this work, we demonstrate limitations to these purported benefits, and show that a single (but larger) neural network can replicate these qualities. First, we show that ensemble diversity, by any metric, does not meaningfully contribute to an ensemble's ability to detect out-of-distribution (OOD) data, but is instead highly correlated with the relative improvement of a single larger model. Second, we show that the OOD performance afforded by ensembles is strongly determined by their in-distribution (InD) performance, and - in this sense - is not indicative of any "effective robustness." While deep ensembles are a practical way to achieve improvements to predictive power, uncertainty quantification, and robustness, our results show that these improvements can be replicated by a (larger) single model.
Taiga Abe, Estefany Kelly Buchanan, Geoff Pleiss, Richard S. Zemel, John P. Cunningham
NeurIPS1
2019 BehaveNet: nonlinear embedding and Bayesian neural decoding of behavioral videos
abstract
A fundamental goal of systems neuroscience is to understand the relationship between neural activity and behavior. Behavior has traditionally been characterized by low-dimensional, task-related variables such as movement speed or response times. More recently, there has been a growing interest in automated analysis of high-dimensional video data collected during experiments. Here we introduce a probabilistic framework for the analysis of behavioral video and neural activity. This framework provides tools for compression, segmentation, generation, and decoding of behavioral videos. Compression is performed using a convolutional autoencoder (CAE), which yields a low-dimensional continuous representation of behavior. We then use an autoregressive hidden Markov model (ARHMM) to segment the CAE representation into discrete "behavioral syllables." The resulting generative model can be used to simulate behavioral video data. Finally, based on this generative model, we develop a novel Bayesian decoding approach that takes in neural activity and outputs probabilistic estimates of the full-resolution behavioral video. We demonstrate this framework on two different experimental paradigms using distinct behavioral and neural recording technologies.
Eleanor Batty, Matthew R. Whiteway, Shreya Saxena, Dan Biderman, Taiga Abe, Simon Musall, Winthrop Gillis, Jeffrey E. Markowitz, Anne Churchland, John P. Cunningham, Sandeep R. Datta, Scott W. Linderman, Liam Paninski
NeurIPS5