VLDB 2026 Research / reviewers in the wild / expert
Junqi Yin
dblp:57/11273
· DBLP profile ↗
18ranked-venue papers
7as first author
17since 2021 · last 2026
0000-0003-3843-5520ORCID · verified
Domains — the database's venue-derived domains; a paper can count in several
Systems, architecture and hardware · 16 · 7 first-author · 15 since 2021Artificial intelligence and machine learning · 1 · 1 since 2021Computer networks · 1 · 1 since 2021
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | FLYING SERVING: On-the-Fly Parallelism Switching for Large Language Model ServingabstractProduction LLM serving must simultaneously deliver high throughput, low latency, and sufficient context capacity under non-stationary traffic and mixed request requirements. Data parallelism (DP) maximizes throughput by running independent replicas, while tensor parallelism (TP) reduces per-request latency and pools memory for long-context inference. However, existing serving stacks typically commit to a static parallelism configuration at deployment; adapting to bursts, priorities, or long-context requests is often disruptive and slow. We present Flying Serving, a vLLM-based system that enables online DP-TP switching without restarting engine workers. Flying Serving makes reconfiguration practical by virtualizing the state that would otherwise force data movement: (i) a zero-copy Model Weights Manager that exposes TP shard views on demand, (ii) a KV Cache Adaptor that preserves request KV state across DP/TP layouts, (iii) an eagerly initialized Communicator Pool to amortize collective setup, and (iv) a deadlock-free scheduler that coordinates safe transitions under execution skew. Across three popular LLMs and realistic serving scenarios, Flying Serving improves performance by up to 4.79 × under high load and 3.47 × under low load while supporting latency- and memory-driven requests. Shouwei Gao, Junqi Yin, Feiyi Wang, Wenqian Dong |
ICS | 2 |
| 2026 | Pixel-Resolved Long-Context Learning for Turbulence at Exascale: Resolving Small-scale Eddies Toward the Viscous LimitabstractTurbulence plays a crucial role in multiphysics applications, including aerodynamics, fusion, and combustion. Accurately capturing turbulence's multiscale characteristics is essential for reliable predictions of multiphysics interactions, but remains a grand challenge even for exascale supercomputers and advanced deep learning models. The extreme-resolution data required to represent turbulence, ranging from billions to trillions of grid points, pose prohibitive computational costs for models based on architectures like vision transformers. To address this challenge, we introduce a multiscale hierarchical Turbulence Transformer that reduces sequence length from billions to a few millions and a novel RingX sequence parallelism approach that enables scalable long-context learning. We perform scaling and science runs on the Frontier supercomputer. Our approach demonstrates excellent performance up to 1.1 EFLOPS on 32,768 AMD GPUs, with a scaling efficiency of 94%. To our knowledge, this is the first AI model for turbulence that can capture small-scale eddies down to the dissipative range. Junqi Yin, Mijanur Palash, M. Paul Laiu, Muralikrishnan Gopalakrishnan Meena, John Gounley, Stephen de Bruyn Kops, Feiyi Wang, Ramanan Sankaran |
IPDPS | 1 |
| 2025 | Modulated Diffusion: Accelerating Generative Modeling with Modulated QuantizationabstractDiffusion models have emerged as powerful generative models, but their high computational cost in iterative sampling remains a significant bottleneck. In this work, we present an in-depth and insightful study of state-of-the-art acceleration techniques for diffusion models, including caching and quantization, and reveal their limitations in computation error and generation quality. To break these limits, this work introduces Modulated Diffusion (MoDiff), an innovative, rigorous, and principled framework that accelerates generative modeling through modulated quantization and error compensation. MoDiff not only inherits the advantages of existing caching and quantization methods but also serves as a general framework to accelerate all diffusion models. The advantages of MoDiff are supported by solid theoretical insight and analysis. In addition, extensive experiments on CIFAR-10 and LSUN demonstrate that MoDiff significantly reduces activation quantization from 8 bits to 3 bits without performance degradation in post-training quantization (PTQ). Our code implementation is available at https://github.com/WeizhiGao/MoDiff. Weizhi Gao, Zhichao Hou, Junqi Yin, Feiyi Wang, Linyu Peng |
ICML | 3 |
| 2025 | RingX: Scalable Parallel Attention for Long-Context Learning on HPCabstractThe attention mechanism has become foundational for remarkable AI breakthroughs since the introduction of the Transformer, driving the demand for increasingly longer context to power frontier models such as large-scale reasoning language models and high-resolution image/video generators. However, its quadratic computational and memory complexities present substantial challenges. Current state-of-the-art parallel attention methods, such as ring attention, are widely adopted for long-context training but utilize a point-to-point communication strategy that fails to fully exploit the capabilities of modern HPC network architectures. In this work, we propose ringX, a scalable family of parallel attention methods optimized explicitly for HPC systems. By enhancing workload partitioning, refining communication patterns, and improving load balancing, ringX achieves up to 3.4 × speedup compared to conventional ring attention on the Frontier supercomputer. Optimized for both bi-directional and causal attention mechanisms, ringX demonstrates its effectiveness through training benchmarks of a Vision Transformer (ViT) on a climate dataset and a Generative Pre-Trained Transformer (GPT) model, Llama3 8B. Our method attains an end-to-end training speedup of approximately 1.5 × in both scenarios. To our knowledge, the achieved 38% model FLOPs utilization (MFU) for training Llama3 8B with a 1M-token sequence length on 4,096 GPUs represents one of the highest training efficiencies reported for long-context learning on HPC systems. Our code implementation is available at https://github.com/jqyin/ringX-attention. Junqi Yin, Mijanur Palash, Mallikarjun Shankar, Feiyi Wang |
SC | 1 |
| 2025 | chatHPC: Empowering HPC users with large language models
Junqi Yin, Jesse Hines, Emily J. Herron, Tirthankar Ghosal, Suzanne Prentice, Vanessa Lama, Feiyi Wang |
J. Supercomput. | 1 |
| 2024 | The Case for Co-Designing Model Architectures with HardwareabstractWhile GPUs are responsible for training the vast majority of state-of-the-art deep learning models, the implications of their architecture are often overlooked when designing new deep learning (DL) models. As a consequence, modifying a DL model to be more amenable to the target hardware can significantly improve the runtime performance of DL training and inference. In this paper, we provide a set of guidelines for users to maximize the runtime performance of their transformer models. These guidelines have been created by carefully considering the impact of various model hyperparameters controlling model shape on the efficiency of the underlying computation kernels executed on the GPU. We find the throughput of models with “efficient” model shapes is up to 39% higher while preserving accuracy compared to models with a similar number of parameters but with unoptimized shapes. Quentin Anthony, Jacob Hatef, Deepak Narayanan, Stella Biderman, Stas Bekman, Junqi Yin, Aamir Shafi, Hari Subramoni, Dhabaleswar K. Panda 0001 |
ICPP | 6 |
| 2024 | Comparative Study of Large Language Model Architectures on FrontierabstractLarge language models (LLMs) have garnered significant attention in both the AI community and beyond. Among these, the Generative Pre-trained Transformer (GPT) has emerged as the dominant architecture, spawning numerous variants. However, these variants have undergone pre-training under diverse conditions, including variations in input data, data preprocessing, and training methodologies, resulting in a lack of controlled comparative studies. Here we meticulously examine two prominent open-sourced GPT architectures, GPT-NeoX and LLaMA, leveraging the computational power of Frontier, the world’s first Exascale supercomputer. Employing the same materials science text corpus and a comprehensive end-to-end pipeline, we conduct a comparative analysis of their training and downstream performance. Our efforts culminate in achieving state-of-the-art performance on a challenging materials science benchmark. Furthermore, we investigate the computation and energy efficiency, and propose a computationally efficient method for architecture design. To our knowledge, these pre-trained models represent the largest available for materials science. Our findings provide practical guidance for building LLMs on HPC platforms. Junqi Yin, Avishek Bose, Guojing Cong, Isaac Lyngaas, Quentin Anthony |
IPDPS | 1 |
| 2024 | ORBIT: Oak Ridge Base Foundation Model for Earth System PredictabilityabstractEarth system predictability is challenged by the complexity of environmental dynamics and the multitude of variables involved. Current AI foundation models, although advanced by leveraging large and heterogeneous data, are often constrained by their size and data integration, limiting their effectiveness in addressing the full range of Earth system prediction challenges. To overcome these limitations, we introduce the Oak Ridge Base Foundation Model for Earth System Predictability (ORBIT), an advanced vision transformer model that scales up to 113 billion parameters using a novel hybrid tensor-data orthogonal parallelism technique. As the largest model of its kind, ORBIT surpasses the current climate AI foundation model size by a thousandfold. Performance scaling tests conducted on the Frontier supercomputer have demonstrated that ORBIT achieves 684 petaFLOPS to 1.6 exaFLOPS sustained throughput, with scaling efficiency maintained at 41% to 85% across 49,152 AMD GPUs. These breakthroughs establish new advances in AIdriven climate modeling and demonstrate promise to significantly improve the Earth system predictability. Xiao Wang 0004, Aristeidis Tsaris, Jong-Youl Choi, Ashwin M. Aji, Wei Zhang 0261, Junqi Yin, Moetasim Ashfaq, Dan Lu 0001, Prasanna Balaprakash |
SC | 8 |
| 2023 | Distributing Simplex-Shaped Nested for-Loops to Identify Carcinogenic Gene CombinationsabstractCancer is a leading cause of death in the US, and it results from a combination of two-nine genetic mutations. Identifying five-hit combinations responsible for several cancer types is computationally intractable even with the fastest super-computers in the USA. Iterating through nested loops required by the process presents a simplex-shaped workload with irregular memory access patterns. Distributing this workload efficiently across thousands of GPUs offers a challenge in dividing simplex-shaped (triangular/tetrahedral) workload into similar shapes with equal volume. Irregular memory access patterns create imbalanced compute utilization across nodes. We developed a generalized solution for distributing a simplex-shaped workload by partially coalescing the nested for-loops, minimizing the memory access overhead by efficiently utilizing limited shared memory, a dynamic scheduler, and loop tiling. For 4-hit combinations, we achieved a 90% − 100% strong scaling efficiency for up to 3594 V100 GPUs on the Summit supercomputer. Finally, we designed and implemented a distributed algorithm to identify 5-hit combinations for four different cancer types, and the identified combinations can differentiate between cancer and normal samples with 86.59−88.79% precision and 84.42 − 90.91% recall. We also demonstrated the robustness of our solution by porting the code to another leadership class computing platform Crusher, a testbed for the fastest supercomputer Frontier. On Crusher, we achieved 98% strong scaling efficiency on 50 nodes (400 AMD MI250X GCDs) and demonstrated the computational readiness of Frontier for scientific applications. Sajal Dash, Mohammad Alaul Haque Monil, Junqi Yin, Ramu Anandakrishnan, Feiyi Wang |
IPDPS | 3 |
| 2023 | DeepThermo: Deep Learning Accelerated Parallel Monte Carlo Sampling for Thermodynamics Evaluation of High Entropy AlloysabstractSince the introduction of Metropolis Monte Carlo (MC) sampling, it and its variants have become standard tools used for thermodynamics evaluations of physical systems. However, a long-standing problem that hinders the effectiveness and efficiency of MC sampling is the lack of a generic method (a.k.a. MC proposal) to update the system configurations. Consequently, current practices are not scalable. Here we propose a parallel MC sampling framework for thermodynamics evaluation—DeepThermo. By using deep learning–based MC proposals that can globally update the system configurations, we show that DeepThermo can effectively evaluate the phase transition behaviors of high entropy alloys, which have an astronomical configuration space. For the first time, we directly evaluate a density of states expanding over a range of ~e10,000for a real material. We also demonstrate DeepThermo’s performance and scalability up to 3,000 GPUs on both NVIDIA V100 and AMD MI250X-based supercomputers. Junqi Yin, Feiyi Wang, Mallikarjun Shankar |
IPDPS | 1 |
| 2023 | FORGE: Pre-Training Open Foundation Models for ScienceabstractLarge language models (LLMs) are poised to revolutionize the way we conduct scientific research. However, both model complexity and pre-training cost are impeding effective adoption for the wider science community. Identifying suitable scientific use cases, finding the optimal balance between model and data sizes, and scaling up model training are among the most pressing issues that need to be addressed. In this study, we provide practical solutions for building and using LLM-based foundation models targeting scientific research use cases. We present an end-to-end examination of the effectiveness of LLMs in scientific research, including their scaling behavior and computational requirements on Frontier, the first Exascale supercomputer. We have also developed for release to the scientific community a suite of open foundation models called FORGE with up to 26B parameters using 257B tokens from over 200M scientific articles, with performance either on par or superior to other state-of-the-art comparable models. We have demonstrated the use and effectiveness of FORGE on scientific downstream tasks. Our research establishes best practices that can be applied across various fields to take advantage of LLMs for scientific discovery. Junqi Yin, Sajal Dash, Feiyi Wang, Mallikarjun Shankar |
SC | 1 |
| 2023 | Stable parallel training of Wasserstein conditional generative adversarial neural networks
Massimiliano Lupo Pasini, Junqi Yin |
J. Supercomput. | 2 |
| 2023 | Evaluation of pre-training large language models on leadership-class supercomputers
Junqi Yin, Sajal Dash, John Gounley, Feiyi Wang, Georgia D. Tourassi |
J. Supercomput. | 1 |
| 2022 | Accelerating Collective Communication in Data Parallel Training across Deep Learning Frameworks
Joshua Romero, Junqi Yin, Nouamane Laanait, M. Todd Young, Sean Treichler, Vitalii Starchenko, Albina Y. Borisevich, Alex Sergeev, Michael A. Matheson |
NSDI | 2 |
| 2021 | IMPECCABLE: Integrated Modeling PipelinE for COVID Cure by Assessing Better LEadsabstractThe drug discovery process currently employed in the pharmaceutical industry typically requires about 10 years and $2–3 billion to deliver one new drug. This is both too expensive and too slow, especially in emergencies like the COVID-19 pandemic. In silico methodologies need to be improved both to select better lead compounds, so as to improve the efficiency of later stages in the drug discovery protocol, and to identify those lead compounds more quickly. No known methodological approach can deliver this combination of higher quality and speed. Here, we describe an Integrated Modeling PipEline for COVID Cure by Assessing Better LEads (IMPECCABLE) that employs multiple methodological innovations to overcome this fundamental limitation. We also describe the computational framework that we have developed to support these innovations at scale, and characterize the performance of this framework in terms of throughput, peak performance, and scientific results. We show that individual workflow components deliver 100 × to 1000 × improvement over traditional methods, and that the integration of methods, supported by scalable infrastructure, speeds up drug discovery by orders of magnitudes. IMPECCABLE has screened ∼ 1011 ligands and has been used to discover a promising drug candidate. These capabilities have been used by the US DOE National Virtual Biotechnology Laboratory and the EU Centre of Excellence in Computational Biomedicine. Aymen Alsaadi, Dario Alfè, Yadu N. Babuji, Agastya Bhati, Ben Blaiszik, Alex Brace, Thomas S. Brettin, Kyle Chard, Ryan Chard, Austin Clyde, Peter V. Coveney, Ian T. Foster, Tom Gibbs, Shantenu Jha, Kristopher Keipert, Dieter Kranzlmüller, Thorsten Kurth, Hyungro Lee, Zhuozhao Li, Gerald Mathias, André Merzky, Alexander Partin, Arvind Ramanathan, Ashka Shah, Abraham C. Stern, Rick L. Stevens, Mikhail Titov, Anda Trifan, Aristeidis Tsaris, Matteo Turilli, Huub J. J. Van Dam, Shunzhou Wan, David Wifling, Junqi Yin |
ICPP | 36 |
| 2021 | A scalable algorithm for the optimization of neural network architectures
Massimiliano Lupo Pasini, Junqi Yin, Ying Wai Li, Markus Eisenbach 0002 |
Parallel Comput. | 2 |
| 2021 | Scalable balanced training of conditional generative adversarial neural networks on image data
Massimiliano Lupo Pasini, Vittorio Gabbi, Junqi Yin, Simona Perotto, Nouamane Laanait |
J. Supercomput. | 3 |
| 2018 | The design, deployment, and evaluation of the CORAL pre-exascale systems
Sudharshan S. Vazhkudai, Bronis R. de Supinski, Arthur S. Bland, Al Geist, James C. Sexton, James A. Kahle, Christopher Zimmer 0001, Scott Atchley, Sarp Oral, Don E. Maxwell, Verónica G. Vergara Larrea, Adam Bertsch, Robin Goldstone, Wayne Joubert, Christopher M. Chambreau, David Appelhans, Robert Blackmore, Ben Casses, George Chochia, Gene Davison, Matthew Ezell, Thomas Gooding, Elsa Gonsiorowski, Leopold Grinberg, Bill Hanson, Bill Hartner, Ian Karlin, Matthew L. Leininger, Dustin Leverman, Chris Marroquin, Adam Moody, Martin Ohmacht, Ramesh Pankajakshan, Fernando Pizzano, James H. Rogers, Bryan S. Rosenburg, Drew Schmidt, Mallikarjun Shankar, Feiyi Wang, Py Watson, Bob Walkup, Lance D. Weems, Junqi Yin |
SC | 43 |