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Brian Duffy

dblp:62/1249 · DBLP profile ↗
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7ranked-venue papers
2as first author
0since 2021 · last 2015
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Graphics, computer vision, multimedia, augmented reality and games · 6 · 2 first-authorApplied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Computer graphics and multimedia
4 papers
Visualization and visual analytics · 95% Image and video processing · 5%
Theoretical computer science
2 papers
Approximation and online algorithms · 67% Mathematical optimization · 33%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Medical and health informatics · 100%

Topics — the 10 heaviest of 11, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Visualization and visual analytics › volume visualization
isosurface statistics
0.332013
Integrating Isosurface Statistics and Histograms · IEEE Trans. Vis. Comput. Graph. 2013
Revisiting Histograms and Isosurface Statistics · IEEE Trans. Vis. Comput. Graph. 2008
On Histograms and Isosurface Statistics · IEEE Trans. Vis. Comput. Graph. 2006
Visualization and visual analytics › visual encoding
glyph-based visualization
0.212015
Glyph-Based Video Visualization for Semen Analysis · IEEE Trans. Vis. Comput. Graph. 2015
Visualization and visual analytics
video visualization
0.212015
Glyph-Based Video Visualization for Semen Analysis · IEEE Trans. Vis. Comput. Graph. 2015
Visualization and visual analytics › topological data analysis
contour tree
0.212013
Integrating Isosurface Statistics and Histograms · IEEE Trans. Vis. Comput. Graph. 2013
Visualization and visual analytics
topological data analysis
0.212013
Integrating Isosurface Statistics and Histograms · IEEE Trans. Vis. Comput. Graph. 2013
Medical and health informatics
sperm analysis
0.112015
Glyph-Based Video Visualization for Semen Analysis · IEEE Trans. Vis. Comput. Graph. 2015
Image and video processing › image statistics
histogram analysis
0.112006
On Histograms and Isosurface Statistics · IEEE Trans. Vis. Comput. Graph. 2006
Visualization and visual analytics
volume visualization
0.112006
On Histograms and Isosurface Statistics · IEEE Trans. Vis. Comput. Graph. 2006
Approximation and online algorithms › approximation algorithms
geometric approximation
0.012013
Integrating Isosurface Statistics and Histograms · IEEE Trans. Vis. Comput. Graph. 2013
Mathematical optimization
geometric measure theory
0.012008
Revisiting Histograms and Isosurface Statistics · IEEE Trans. Vis. Comput. Graph. 2008

Methods — techniques the papers use, named apart from their topics

spatio-temporal motion summarization · 0.4glyph encoding · 0.4quantization model · 0.3convergence proof · 0.3histogram equalization · 0.2gradient magnitude weighting · 0.2coarea formula · 0.2nearest neighbour interpolation · 0.1isosurface statistics · 0.1
YearPublicationVenuePosition
2015 Glyph-Based Video Visualization for Semen Analysis
abstract
The existing efforts in computer assisted semen analysis have been focused on high speed imaging and automated image analysis of sperm motility. This results in a large amount of data, and it is extremely challenging for both clinical scientists and researchers to interpret, compare and correlate the multidimensional and time-varying measurements captured from video data. In this work, we use glyphs to encode a collection of numerical measurements taken at a regular interval and to summarize spatio-temporal motion characteristics using static visual representations. The design of the glyphs addresses the needs for (a) encoding some 20 variables using separable visual channels, (b) supporting scientific observation of the interrelationships between different measurements and comparison between different sperm cells and their flagella, and (c) facilitating the learning of the encoding scheme by making use of appropriate visual abstractions and metaphors. As a case study, we focus this work on video visualization for computer-aided semen analysis, which has a broad impact on both biological sciences and medical healthcare. We demonstrate that glyph-based visualization can serve as a means of external memorization of video data as well as an overview of a large set of spatiotemporal measurements. It enables domain scientists to make scientific observation in a cost-effective manner by reducing the burden of viewing videos repeatedly, while providing them with a new visual representation for conveying semen statistics.
Brian Duffy, Jeyan Thiyagalingam, Simon J. Walton, David J. Smith, Anne E. Trefethen, Jackson C. Kirkman-Brown, Eamonn A. Gaffney, Min Chen 0001
IEEE Trans. Vis. Comput. Graph.1
2014 Visual Multiplexing
abstract
Abstract The majority of display devices used in visualization are 2D displays. Inevitably, it is often necessary to overlay one piece of visual information on top of another, especially in applications such as multi‐field visualization and geo‐spatial information visualization. In this paper, we present a conceptual framework for studying the mechanisms for overlaying multiple pieces of visual information while allowing users to recover occluded information. We adopt the term ‘multiplexing’ from tele‐ and data communication to encompass all such overlapping mechanisms. We establish 10 categories of visual multiplexing mechanisms. We draw support evidence from both perception literature and existing works in visualization to support this conceptual framework. We examine the relationships between multiplexing and information theoretic measures. This new conceptual categorization provides the much‐needed theory of visualization with an integral component.
Min Chen 0001, Simon J. Walton, Kai Berger, Jeyan Thiyagalingam, Brian Duffy, Hui Fang 0003, Cameron Holloway, Anne E. Trefethen
Comput. Graph. Forum5
2013 Complexity Plots
abstract
Abstract In this paper, we present a novel visualization technique for assisting the observation and analysis of algorithmic complexity. In comparison with conventional line graphs, this new technique is not sensitive to the units of measurement, allowing multivariate data series of different physical qualities (e.g., time, space and energy) to be juxtaposed together conveniently and consistently. It supports multivariate visualization as well as uncertainty visualization. It enables users to focus on algorithm categorization by complexity classes, while reducing visual impact caused by constants and algorithmic components that are insignificant to complexity analysis. It provides an effective means for observing the algorithmic complexity of programs with a mixture of algorithms and black‐box software through visualization. Through two case studies, we demonstrate the effectiveness of complexity plots in complexity analysis in research, education and application.
Jeyan Thiyagalingam, Simon J. Walton, Brian Duffy, Anne E. Trefethen, Min Chen 0001
Comput. Graph. Forum3
2013 Integrating Isosurface Statistics and Histograms
abstract
Many data sets are sampled on regular lattices in two, three or more dimensions, and recent work has shown that statistical properties of these data sets must take into account the continuity of the underlying physical phenomena. However, the effects of quantization on the statistics have not yet been accounted for. This paper therefore reconciles the previous papers to the underlying mathematical theory, develops a mathematical model of quantized statistics of continuous functions, and proves convergence of geometric approximations to continuous statistics for regular sampling lattices. In addition, the computational cost of various approaches is considered, and recommendations made about when to use each type of statistic.
Brian Duffy, Hamish A. Carr, Torsten Möller
IEEE Trans. Vis. Comput. Graph.1
2010 The Active Temperature, Ozone and Moisture Microwave Spectrometer (ATOMMS), a new global climate sensor
abstract
We are developing a new remote sensing system at the University of Arizona called the Active Temperature, Ozone and Moisture Microwave Spectrometer (ATOMMS). ATOMMS combines many of the best features of GPS Radio Occultation (RO) and the Microwave Limb Sounder (MLS) by actively probing cm to sub-mm wavelength atmospheric absorption features via satellite-to-satellite occultation. ATOMMS will provide an unprecedented combination of features for monitoring climate from orbit. With funding from NSF and aircraft time from NASA, we will demonstrate the ATOMMS concept via high altitude aircraft-to-aircraft occultations in 2011. Here we summarize the ATOMMS concept and demonstration project and provide early test results from the instrument indicative of ATOMMS capabilities and performance.
Emil R. Kursinski, Angel Otarola, Dale Ward 0001, Abram Young, Sarmad Albanna, Christopher Groppi, Robert Stickney, Michael Stovern, Brian Wheelwright, Brian Duffy, Michael Schein, Katherine Sammler, Rod Frehlich, Willy Bertiger, Herb Pickett, David Rind, Martin Ross
IGARSS10
2008 Revisiting Histograms and Isosurface Statistics
abstract
Recent results have shown a link between geometric properties of isosurfaces and statistical properties of the underlying sampled data. However, this has two defects: not all of the properties described converge to the same solution, and the statistics computed are not always invariant under isosurface-preserving transformations. We apply Federer's Coarea Formula from geometric measure theory to explain these discrepancies. We describe an improved substitute for histograms based on weighting with the inverse gradient magnitude, develop a statistical model that is invariant under isosurface-preserving transformations, and argue that this provides a consistent method for algorithm evaluation across multiple datasets based on histogram equalization. We use our corrected formulation to reevaluate recent results on average isosurface complexity, and show evidence that noise is one cause of the discrepancy between the expected figure and the observed one.
Carlos Scheidegger, John M. Schreiner, Brian Duffy, Hamish A. Carr, Cláudio T. Silva
IEEE Trans. Vis. Comput. Graph.3
2006 On Histograms and Isosurface Statistics
abstract
In this paper, we show that histograms represent spatial function distributions with a nearest neighbour interpolation. We confirm that this results in systematic underrepresentation of transitional features of the data, and provide new insight why this occurs. We further show that isosurface statistics, which use higher quality interpolation, give better representations of the function distribution. We also use our experimentally collected isosurface statistics to resolve some questions as to the formal complexity of isosurfaces.
Hamish A. Carr, Brian Duffy, Brian Denby
IEEE Trans. Vis. Comput. Graph.2