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Martial Hue

dblp:64/622 · DBLP profile ↗
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4ranked-venue papers
2as first author
1since 2021 · last 2021
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 2 · 1 first-author · 1 since 2021Applied, interdisciplinary, general and emerging computing · 2 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Artificial intelligence
1 paper
Kernel, tree and ensemble methods · 100%
Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Machine learning › Kernel, tree and ensemble methods
kernel methods
0.112010
On learning with kernels for unordered pairs · ICML 2010
Bioinformatics and computational biology › protein structure analysis
protein structure annotation
0.112007
A structural alignment kernel for protein structures · Bioinform. 2007
Bioinformatics and computational biology
protein function prediction
0.012007
A structural alignment kernel for protein structures · Bioinform. 2007

Methods — techniques the papers use, named apart from their topics

kernel methods · 0.2support vector machine · 0.1structural alignment · 0.1
YearPublicationVenuePosition
2021 Audience expansion based on user browsing history
abstract
A huge number of display advertising campaigns are launched every day by advertisers in order to promote their products or services. The main objective of each advertiser is to display ads to specific groups of users, i.e. users who meet specific criteria or their interests are related to the promoted products or services. Audience expansion, also known as audience look-alike targeting, is one of the major display advertising techniques that helps advertisers to discover audiences with similar attributes to a target audience who is interested in advertisers' products or services. In this paper, we present different audience expansion schemes able to identify users with similar browsing interests to those of the seed users provided by the advertiser. The proposed audience expansion schemes are based on different unsupervised representation models that are able to capture the interests of the users according to their browsing history. We have conducted an extensive empirical study on a real data collected from an advertising platform to analyse the effectiveness of the proposed schemes to expand the audiences of five different advertisers.
Nikolaos Tziortziotis, Yang Qiu 0001, Martial Hue, Michalis Vazirgiannis
IJCNN3
2010 On learning with kernels for unordered pairs
Martial Hue, Jean-Philippe Vert
ICML1
2010 Large-scale prediction of protein-protein interactions from structures
abstract
BACKGROUND: The prediction of protein-protein interactions is an important step toward the elucidation of protein functions and the understanding of the molecular mechanisms inside the cell. While experimental methods for identifying these interactions remain costly and often noisy, the increasing quantity of solved 3D protein structures suggests that in silico methods to predict interactions between two protein structures will play an increasingly important role in screening candidate interacting pairs. Approaches using the knowledge of the structure are presumably more accurate than those based on sequence only. Approaches based on docking protein structures solve a variant of this problem, but these methods remain very computationally intensive and will not scale in the near future to the detection of interactions at the level of an interactome, involving millions of candidate pairs of proteins. RESULTS: Here, we describe a computational method to predict efficiently in silico whether two protein structures interact. This yes/no question is presumably easier to answer than the standard protein docking question, "How do these two protein structures interact?" Our approach is to discriminate between interacting and non-interacting protein pairs using a statistical pattern recognition method known as a support vector machine (SVM). We demonstrate that our structure-based method performs well on this task and scales well to the size of an interactome. CONCLUSIONS: The use of structure information for the prediction of protein interaction yields significantly better performance than other sequence-based methods. Among structure-based classifiers, the SVM algorithm, combined with the metric learning pairwise kernel and the MAMMOTH kernel, performs best in our experiments.
Martial Hue, Michael Riffle, Jean-Philippe Vert, William Stafford Noble
BMC Bioinform.1
2007 A structural alignment kernel for protein structures
abstract
MOTIVATION: This work aims to develop computational methods to annotate protein structures in an automated fashion. We employ a support vector machine (SVM) classifier to map from a given class of structures to their corresponding structural (SCOP) or functional (Gene Ontology) annotation. In particular, we build upon recent work describing various kernels for protein structures, where a kernel is a similarity function that the classifier uses to compare pairs of structures. RESULTS: We describe a kernel that is derived in a straightforward fashion from an existing structural alignment program, MAMMOTH. We find in our benchmark experiments that this kernel significantly out-performs a variety of other kernels, including several previously described kernels. Furthermore, in both benchmarks, classifying structures using MAMMOTH alone does not work as well as using an SVM with the MAMMOTH kernel. AVAILABILITY: http://noble.gs.washington.edu/proj/3dkernel
Martial Hue, Asa Ben-Hur, Jean-Philippe Vert, William Stafford Noble
Bioinform.2