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Kyoung Kim

dblp:67/7714 · DBLP profile ↗
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2ranked-venue papers
0as first author
0since 2021 · last 2018
0000-0002-4075-6537ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Software engineering, systems software and programming languages · 1Applied, interdisciplinary, general and emerging computing · 1

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 2 heaviest of 2, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › transcriptomics
RNA-seq analysis
0.312018
Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development · Bioinform. 2018
Bioinformatics and computational biology › transcriptomics › small RNA-seq analysis
small RNA-seq processing
0.112018
Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development · Bioinform. 2018

Methods — techniques the papers use, named apart from their topics

read mapping · 0.3exogenous genome alignment · 0.3
YearPublicationVenuePosition
2018 Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development
abstract
Motivation: Analysis of RNA sequencing (RNA-Seq) data in human saliva is challenging. Lack of standardization and unification of the bioinformatic procedures undermines saliva's diagnostic potential. Thus, it motivated us to perform this study. Results: We applied principal pipelines for bioinformatic analysis of small RNA-Seq data of saliva of 98 healthy Korean volunteers including either direct or indirect mapping of the reads to the human genome using Bowtie1. Analysis of alignments to exogenous genomes by another pipeline revealed that almost all of the reads map to bacterial genomes. Thus, salivary exRNA has fundamental properties that warrant the design of unique additional steps while performing the bioinformatic analysis. Our pipelines can serve as potential guidelines for processing of RNA-Seq data of human saliva. Availability and implementation: Processing and analysis results of the experimental data generated by the exceRpt (v4.6.3) small RNA-seq pipeline (github.gersteinlab.org/exceRpt) are available from exRNA atlas (exrna-atlas.org). Alignment to exogenous genomes and their quantification results were used in this paper for the analyses of small RNAs of exogenous origin. Contact: [email protected].
Karolina Elzbieta Kaczor-Urbanowicz, Yong Kim, Feng Li 0013, Timur Galeev, Robert R. Kitchen, Mark Gerstein, Kikuye Koyano, Sung-Hee Jeong, David Elashoff, So Young Kang, Su Mi Kim, Kyoung Kim, David Chia, Xinshu Xiao, Joel S. Rozowsky, David T. W. Wong
Bioinform.13
2009 Automation Test Method for Automotive Embedded Software Based on AUTOSAR
abstract
This paper discusses new approach to materialize for automation test method for automotive embedded software. The total automotive embedded software is changing frequently whenever the specification for hardware is modified. These cause to spend time and cost. To resolve these problems, AUTOSAR which consists of the standardized interfaces, structures and communication method was introduced. AUTOSAR has Client-Server mechanism in order to communicate effectively. This means that automotive systems have to be controlled by embedded software simultaneously through CAN and Serial communication method. And the AUTOSAR proposes software architecture and communication method to improve the quality of automotive embedded software. This paper suggests an automotive HVAC system based on AUTOSAR to testify the propriety as a standard architecture, and proposes automation test method and technique. Finally, AUTOSAR is demonstrated as standardized software architecture and communication method, and we suggest automation testing technique to enhance the accuracy and reduce the time and cost to testify for automotive embedded software.
Huichoun Moon, Gwanghun Kim, Yeongyun Kim, Seokkyoo Shin, Kyoung Kim, Sanggui Im
ICSEA5