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Shawn R. Lockery

dblp:69/3467 · DBLP profile ↗
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7ranked-venue papers
3as first author
0since 2021 · last 2006
0000-0001-8535-7989ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Artificial intelligence and machine learning · 7 · 3 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
3 papers
Bioinformatics and computational biology · 100%
Artificial intelligence
2 papers
Knowledge representation and reasoning · 72% Representation and self-supervised learning · 28%
Theoretical computer science
1 paper
Mathematical optimization · 100%

Topics — the 6 heaviest of 6, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
computational neuroscience
0.022003
Circuit Optimization Predicts Dynamic Network for Chemosensory Orientation in the Nematode C. elegans · NIPS 2003
Neural Network Analysis of Distributed Representations of Dynamical Sensory-Motor Transormations in the Leech · NIPS 1989
Knowledge, reasoning and agents › Knowledge representation and reasoning
computational neuroscience models
0.011996
Neural Network Models of Chemotaxis in the Nematode Caenorhabditis Elegans · NIPS 1996
Mathematical optimization › combinatorial optimization
network optimization
0.012003
Circuit Optimization Predicts Dynamic Network for Chemosensory Orientation in the Nematode C. elegans · NIPS 2003
Machine learning › Representation and self-supervised learning › word representation
distributed representation
0.011989
Neural Network Analysis of Distributed Representations of Dynamical Sensory-Motor Transormations in the Leech · NIPS 1989
Bioinformatics and computational biology › neuroscience
neurobiology
0.011996
Neural Network Models of Chemotaxis in the Nematode Caenorhabditis Elegans · NIPS 1996
Bioinformatics and computational biology › computational neuroscience
neural coding
0.011989
Neural Network Analysis of Distributed Representations of Dynamical Sensory-Motor Transormations in the Leech · NIPS 1989

Methods — techniques the papers use, named apart from their topics

neural network model · 0.0neural network analysis · 0.0
YearPublicationVenuePosition
2006 Clustered Neural Dynamics Identify Motifs for Chemotaxis in Caenorhabditis elegans
abstract
Although anatomical connectivity of the nematode Caenorhabditis elegans has been almost completely described, determination of the neurophysiological basis of behavior is just beginning. Here, we performed a stochastic search to determine neural network parameters sufficient for a model worm to exhibit chemotaxis, a form of spatial orientation behavior in which turning probability is modulated by the rate of change of chemical concentration. To better comprehend network solutions, we developed a novel method (Neural Dynamic Clustering) to identify neural dynamic motifs. We identified two types of motifs, one of which had been previously identified, and validated the behavior generated by the motifs against experimental chemotaxis.
Nathan A. Dunn, Jonathan T. Pierce-Shimomura, John S. Conery, Shawn R. Lockery
IJCNN4
2003 A neural network model for chemotaxis in Caenorhabditis elegans
abstract
In Caenorhabditis elegans, spatial orientation behavior in a chemical gradient (chemotaxis) involves bouts of turning (pirouettes) modulated by the change in concentration of attractant. Ablation of identified neurons has delineated a candidate neural network for chemotaxis in C. elegans. The aim of our research is to generate testable models of how the network computes behavioral state and consequently, turning frequency, in response to changes in concentration. We were able to train neural networks to exhibit known chemotaxis rules using experimental data from chemotaxing C. elegans. The resultant network solutions involved three to five dynamically contributing neurons. Here we have analyzed the three neuron solutions and found three distinguishing features: a fast excitatory and delayed inhibitory connection, which acts as a differentiator; self-connections, which act to regulate neural response speed similar to synaptic time-constants; and recurrent inhibitory connections, which regulate second order network response characteristics. We plan to use this model to predict and interpret the results of laser ablations of neurons and genetic mutation in the C. elegans chemotaxis network.
Nathan A. Dunn, John S. Conery, Shawn R. Lockery
IJCNN3
2003 Circuit Optimization Predicts Dynamic Network for Chemosensory Orientation in the Nematode C. elegans
Nathan A. Dunn, John S. Conery, Shawn R. Lockery
NIPS3
1996 Neural Network Models of Chemotaxis in the Nematode Caenorhabditis Elegans
Thomas C. Ferrée, Ben A. Marcotte, Shawn R. Lockery
NIPS3
1990 A dynamical neural network model of sensorimotor transformations in the leech
abstract
Interneurons in leech ganglia receive multiple sensory inputs and make synaptic contacts with many motor neurons. These hidden units coordinate several different behaviors. The authors used physiological and anatomical constraints to construct a model of the local bending reflex. Dynamical networks were trained on experimentally derived input-output patterns using recurrent back propagation. Units in the model were modified to include electrical synapses and multiple synaptic time constants. The properties of the hidden units that emerged in the simulations matched those in the leech. The model and data support distributed rather than localist representations in the local bending reflex. The results also explain counterintuitive aspects of the local bending circuitry
Shawn R. Lockery, Terrence J. Sejnowski
IJCNN1
1990 A Dynamic Neural Network Model of Sensorimotor Transformations in the Leech
abstract
Interneurons in leech ganglia receive multiple sensory inputs and make synaptic contacts with many motor neurons. These “hidden” units coordinate several different behaviors. We used physiological and anatomical constraints to construct a model of the local bending reflex. Dynamic networks were trained on experimentally derived input-output patterns using recurrent backpropagation. Units in the model were modified to include electrical synapses and multiple synaptic time constants. The properties of the hidden units that emerged in the simulations matched those in the leech. The model and data support distributed rather than localist representations in the local bending reflex. These results also explain counterintuitive aspects of the local bending circuitry.
Shawn R. Lockery, Terrence J. Sejnowski
Neural Comput.1
1989 Neural Network Analysis of Distributed Representations of Dynamical Sensory-Motor Transormations in the Leech
Shawn R. Lockery, Terrence J. Sejnowski
NIPS1