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Joydev Chattopadhyay

dblp:71/10468 · DBLP profile ↗
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2ranked-venue papers
0as first author
2since 2021 · last 2025
0000-0003-0466-3066ORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 2 · 2 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 91% Computational science and engineering · 9%

Topics — the 4 heaviest of 4, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › systems biology › dynamical system modeling
bistability detection
0.512021
Bistability in cell signalling and its significance in identifying potential drug-targets · Bioinform. 2021
Bioinformatics and computational biology › systems biology
cellular signaling
0.512021
Bistability in cell signalling and its significance in identifying potential drug-targets · Bioinform. 2021
Bioinformatics and computational biology › drug discovery › target identification
drug target identification
0.512021
Bistability in cell signalling and its significance in identifying potential drug-targets · Bioinform. 2021
Computational science and engineering
sensitivity analysis
0.112021
Bistability in cell signalling and its significance in identifying potential drug-targets · Bioinform. 2021

Methods — techniques the papers use, named apart from their topics

stochastic simulation · 0.5global sensitivity analysis · 0.5
YearPublicationVenuePosition
2025 Coupling plankton and cholera dynamics: Insights into outbreak prediction and practical disease management
abstract
Despite extensive control efforts over the centuries, cholera remains a globally significant health issue. Seasonal emergence of cholera cases has been reported, particularly in the Bengal delta region, which is often synchronized with plankton blooms. This phenomenon has been widely attributed to the commensal interaction between Vibrio cholerae and zooplankton in aquatic environments. The role of plankton dynamics in cholera epidemiology has been acknowledged but remains poorly understood, and consequently, its importance in effective policymaking is largely overlooked. To this end, we propose and analyze a novel compartment-based transmission model that integrates phytoplankton-zooplankton interactions into a human-bacteria cholera framework. Our study shows that, beyond the reproduction number, the relative contribution of bacterial versus zooplankton-mediated transmission plays a crucial role in shaping epidemic progression and severity. In presence of zooplankton-mediated transmission, an outbreak with a delayed and lower peak may still result in a larger overall outbreak size. Additionally, contrary to common intuition, even for a large and early outbreak, the epidemic overshoot may intensify due to the maintenance of lower-level infections during the post-peak phase. Furthermore, our analysis reveals that the timing of filtration-like interventions can be strategically guided by ecological indicators, such as phytoplankton blooms. Our study underscores the importance of incorporating ecological aspects in epidemiological research to better predict and manage disease outbreaks.
Biplab Maity, Swarnendu Banerjee, Abhishek Senapati, Jon Pitchford, Joydev Chattopadhyay
PLoS Comput. Biol.5
2021 Bistability in cell signalling and its significance in identifying potential drug-targets
abstract
MOTIVATION: Bistability is one of the salient dynamical features in various all-or-none kinds of decision-making processes. The presence of bistability in a cell signalling network plays a key role in input-output (I/O) relation. Our study is aiming to capture and emphasize the role of motif structure influencing the I/O relation between two nodes in the context of bistability. Here, a model-based analysis is made to investigate the critical conditions responsible for the emergence of different bistable protein-protein interaction (PPI) motifs and their possible applications to find the potential drug-targets. RESULTS: The global sensitivity analysis is used to identify sensitive parameters and their role in maintaining the bistability. Additionally, the bistable switching through hysteresis is explored to develop an understanding of the underlying mechanisms involved in the cell signalling processes, when significant motifs exhibiting bistability have emerged. Further, we elaborate the application of the results by the implication of the emerged PPI motifs to identify potential drug-targets in three cancer networks, which is validated with existing databases. The influence of stochastic perturbations that could hinder desired functionality of any signalling networks is also described here. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Suvankar Halder, Sumana Ghosh, Joydev Chattopadhyay, Samrat Chatterjee
Bioinform.3