Szymon Wilk

dblp:77/4305 · DBLP profile ↗
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53ranked-venue papers
5as first author
22since 2021 · last 2026
0000-0002-7807-454XORCID · verified

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 34 · 5 first-author · 16 since 2021Artificial intelligence and machine learning · 18 · 1 first-author · 6 since 2021Databases, data management, data science and information retrieval · 4 · 1 since 2021Human-computer interaction and ubiquitous computing · 2 · 1 first-author · 1 since 2021Graphics, computer vision, multimedia, augmented reality and games · 1Theory of computation · 1
YearPublicationVenuePosition
2026 SemAS - Semantic Alignment Score for XAI Applications in Clinical Decision Support
Laura Bergomi, Martin Michalowski, Szymon Wilk, Marc Carrier, Grégoire Le Gal, Tzu-Fei Wang, Wojtek Michalowski
AIME (1)3
2025 CUE-X: A Framework for the Automatic Evaluation of Clinical Usefulness of Explanations for the Multimorbidity Problem
Martin Michalowski, Szymon Wilk, Jenny M. Bauer, Marc Carrier, Herna L. Viktor, Wojtek Michalowski
AIME (1)2
2024 Manually-Curated Versus LLM-Generated Explanations for Complex Patient Cases: An Exploratory Study with Physicians
Martin Michalowski, Szymon Wilk, Jenny M. Bauer, Marc Carrier, Aurelien Delluc, Grégoire Le Gal, Tzu-Fei Wang, Deborah Siegal, Wojtek Michalowski
AIME (2)2
2024 Provision and evaluation of explanations within an automated planning-based approach to solving the multimorbidity problem
Martin Michalowski, Szymon Wilk, Wojtek Michalowski, Malvika Rao, Marc Carrier
J. Biomed. Informatics2
2024 How can we reward you? A compliance and reward ontology (CaRO) for eliciting quantitative reward rules for engagement in mHealth app and healthy behaviors
Mor Peleg, Nicole Veggiotti, Lucia Sacchi, Szymon Wilk
J. Biomed. Informatics4
2023 Using graph rewriting to operationalize medical knowledge for the revision of concurrently applied clinical practice guidelines
Martin Michalowski, Malvika Rao, Szymon Wilk, Wojtek Michalowski, Marc Carrier
Artif. Intell. Medicine3
2023 Why did AI get this one wrong? - Tree-based explanations of machine learning model predictions
abstract
Increasingly complex learning methods such as boosting, bagging and deep learning have made ML models more accurate, but harder to interpret and explain, culminating in black-box machine learning models. Model developers and users alike are often presented with a trade-off between performance and intelligibility, especially in high-stakes applications like medicine. In the present article we propose a novel methodological approach for generating explanations for the predictions of a generic machine learning model, given a specific instance for which the prediction has been made. The method, named AraucanaXAI, is based on surrogate, locally-fitted classification and regression trees that are used to provide post-hoc explanations of the prediction of a generic machine learning model. Advantages of the proposed XAI approach include superior fidelity to the original model, ability to deal with non-linear decision boundaries, and native support to both classification and regression problems. We provide a packaged, open-source implementation of the AraucanaXAI method and evaluate its behaviour in a number of different settings that are commonly encountered in medical applications of AI. These include potential disagreement between the model prediction and physician's expert opinion and low reliability of the prediction due to data scarcity.
Enea Parimbelli, Tommaso Mario Buonocore, Giovanna Nicora, Wojtek Michalowski, Szymon Wilk, Riccardo Bellazzi
Artif. Intell. Medicine5
2023 Personalization in mHealth: Innovative informatics methods to improve patient experience and health outcome
Elske Ammenwerth, Szymon Wilk, Zhengxing Huang
J. Biomed. Informatics2
2023 SATO (IDEAS expAnded wiTh BCIO): Workflow for designers of patient-centered mobile health behaviour change intervention applications
abstract
Designing effective theory-driven digital behaviour change interventions (DBCI) is a challenging task. To ease the design process, and assist with knowledge sharing and evaluation of the DBCI, we propose the SATO (IDEAS expAnded wiTh BCIO) design workflow based on the IDEAS (Integrate, Design, Assess, and Share) framework and aligned with the Behaviour Change Intervention Ontology (BCIO). BCIO is a structural representation of the knowledge in behaviour change domain supporting evaluation of behaviour change interventions (BCIs) but it is not straightforward to utilise it during DBCI design. IDEAS (Integrate, Design, Assess, and Share) framework guides multi-disciplinary teams through the mobile health (mHealth) application development life-cycle but it is not aligned with BCIO entities. SATO couples BCIO entities with workflow steps and extends IDEAS Integrate stage with consideration of customisation and personalisation. We provide a checklist of the activities that should be performed during intervention planning with concrete examples and a tutorial accompanied with case studies from the Cancer Better Life Experience (CAPABLE) European project. In the process of creating this workflow, we found the necessity to extend the BCIO to support the scenarios of multiple clinical goals in the same application. To ensure the SATO steps are easy to follow for the incomers to the field, we performed a preliminary evaluation of the workflow with two knowledge engineers, working on novel mHealth app design tasks.
Aneta Lisowska, Szymon Wilk, Mor Peleg
J. Biomed. Informatics2
2023 A community-of-practice-based evaluation methodology for knowledge intensive computational methods and its application to multimorbidity decision support
William Van Woensel, Samson W. Tu, Wojtek Michalowski, Syed Sibte Raza Abidi, Samina Abidi, José Ramón Alonso 0001, Alessio Bottrighi, Marc Carrier, Ruth Edry, Irit Hochberg, Malvika Rao, Stephen P. Kingwell, Alexandra Kogan, Mar Marcos, Begoña Martínez-Salvador, Martin Michalowski, Luca Piovesan, David Riaño 0001, Paolo Terenziani, Szymon Wilk, Mor Peleg
J. Biomed. Informatics20
2022 Comparision of Models Built Using AutoML and Data Fusion
Anam Haq, Szymon Wilk, Alberto Abelló
ADBIS2
2022 Towards an AI Planning-Based Pipeline for the Management of Multimorbid Patients
Malvika Rao, Martin Michalowski, Szymon Wilk, Wojtek Michalowski, Amanda Jane Coles, Marc Carrier
AIME3
2022 How to Improve Digital Wellbeing Interventions? Preliminary Study of Factors Affecting Intervention Engagement, Impact, and Habit Formation
Aneta Lisowska, Shiri Lavy, Szymon Wilk, Mor Peleg
AMIA3
2022 Personalization in mHealth: Innovative informatics methods to improve patient experience and health outcome
Elske Ammenwerth, Szymon Wilk, Zhengxing Huang
J. Biomed. Informatics2
2021 Catching Patient's Attention at the Right Time to Help Them Undergo Behavioural Change: Stress Classification Experiment from Blood Volume Pulse
Aneta Lisowska, Szymon Wilk, Mor Peleg
AIME2
2021 MitPlan 2.0: Enhanced Support for Multi-morbid Patient Management Using Planning
Martin Michalowski, Malvika Rao, Szymon Wilk, Wojtek Michalowski, Marc Carrier
AIME3
2021 CAncer PAtients Better Life Experience (CAPABLE) First Proof-of-Concept Demonstration
Enea Parimbelli, Matteo Gabetta, Giordano Lanzola, Francesca Polce, Szymon Wilk, David Glasspool, Alexandra Kogan, Roy Leizer, Vitali Gisko, Nicole Veggiotti, Silvia Panzarasa, Rowdy de Groot, Manuel Ottaviano, Lucia Sacchi, Ronald Cornet, Mor Peleg, Silvana Quaglini
AIME5
2021 Towards a framework for comparing functionalities of multimorbidity clinical decision support: A literature-based feature set and benchmark cases
Dympna O'Sullivan, William Van Woensel, Szymon Wilk, Samson W. Tu, Wojtek Michalowski, Samina Abidi, Marc Carrier, Ruth Edry, Irit Hochberg, Stephen P. Kingwell, Alexandra Kogan, Martin Michalowski, Hugh O'Sullivan, Mor Peleg
AMIA3
2021 Is it a good time to survey you? Cognitive load classification from blood volume pulse
abstract
The CAPABLE project aims to improve the wellbeing of cancer patients managed at home via a mobile Coaching System recommending physical and mental health interventions. Patient reported outcomes are important for evaluation of the efficacy of these interventions. Nevertheless a large number of surveys might be overwhelming to patients. To understand the cognitive demand caused by the surveys and to find the adequate time to prompt patients to complete them we carried out a feasibility study. In this study we developed a machine learning cognitive load detector from blood volume pulse (BVP) captured by a photoplethysmography (PPG) signal. PPG sensors are available on consumer-grade smartwatches, which we will use in our Coaching System. We found that personalised 1D convolutional neural networks trained on raw BVP signal performed better in binary high vs low cognitive load classification than the personalised Support Vector Machines trained with heart rate variability and BVP features. We investigated if the further improvements can be obtained by teacher-student semi-supervised model training, nevertheless the performance gains were not notable. In the future we will include additional context information that might aid cognitive load estimation and drive both survey design as well as the timing of the prompts.
Aneta Lisowska, Szymon Wilk, Mor Peleg
CBMS2
2021 MitPlan: A planning approach to mitigating concurrently applied clinical practice guidelines
Martin Michalowski, Szymon Wilk, Wojtek Michalowski, Marc Carrier
Artif. Intell. Medicine2
2021 A review of AI and Data Science support for cancer management
abstract
INTRODUCTION: Thanks to improvement of care, cancer has become a chronic condition. But due to the toxicity of treatment, the importance of supporting the quality of life (QoL) of cancer patients increases. Monitoring and managing QoL relies on data collected by the patient in his/her home environment, its integration, and its analysis, which supports personalization of cancer management recommendations. We review the state-of-the-art of computerized systems that employ AI and Data Science methods to monitor the health status and provide support to cancer patients managed at home. OBJECTIVE: Our main objective is to analyze the literature to identify open research challenges that a novel decision support system for cancer patients and clinicians will need to address, point to potential solutions, and provide a list of established best-practices to adopt. METHODS: We designed a review study, in compliance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, analyzing studies retrieved from PubMed related to monitoring cancer patients in their home environments via sensors and self-reporting: what data is collected, what are the techniques used to collect data, semantically integrate it, infer the patient's state from it and deliver coaching/behavior change interventions. RESULTS: Starting from an initial corpus of 819 unique articles, a total of 180 papers were considered in the full-text analysis and 109 were finally included in the review. Our findings are organized and presented in four main sub-topics consisting of data collection, data integration, predictive modeling and patient coaching. CONCLUSION: Development of modern decision support systems for cancer needs to utilize best practices like the use of validated electronic questionnaires for quality-of-life assessment, adoption of appropriate information modeling standards supplemented by terminologies/ontologies, adherence to FAIR data principles, external validation, stratification of patients in subgroups for better predictive modeling, and adoption of formal behavior change theories. Open research challenges include supporting emotional and social dimensions of well-being, including PROs in predictive modeling, and providing better customization of behavioral interventions for the specific population of cancer patients.
Enea Parimbelli, Szymon Wilk, Ronald Cornet, Pawel Sniatala, K. Sniatala, S. L. C. Glaser, Itske Fraterman, Annelies H. Boekhout, Manuel Ottaviano, Mor Peleg
Artif. Intell. Medicine2
2021 Preface: AIME 2019
David Riaño 0001, Szymon Wilk, Annette ten Teije
Artif. Intell. Medicine2
2020 Assessing the Impact of Distance Functions on K-Nearest Neighbours Imputation of Biomedical Datasets
Miriam Seoane Santos, Pedro H. Abreu, Szymon Wilk, João A. M. Santos
AIME3
2020 How distance metrics influence missing data imputation with k-nearest neighbours
Miriam Seoane Santos, Pedro H. Abreu, Szymon Wilk, João A. M. Santos
Pattern Recognit. Lett.3
2019 MitPlan: A Planning Approach to Mitigating Concurrently Applied Clinical Practice Guidelines
Martin Michalowski, Szymon Wilk, Wojtek Michalowski, Marc Carrier
AIME2
2019 How Do Spinal Surgeons Perceive The Impact of Factors Used in Post-Surgical Complication Risk Scores?
Enea Parimbelli, Szymon Wilk, Dympna O'Sullivan, Stephen P. Kingwell, Wojtek Michalowski, Martin Michalowski
AMIA2
2018 Representing Drug Classes for Mitigating Concurrently Applied CPGs
Martin Michalowski, Szymon Wilk, Wojtek Michalowski, Marc Carrier
AMIA2
2018 Shared Decision-Making Ontology for a Healthcare Team Executing a Workflow, an Instantiation for Metastatic Spinal Cord Compression Management
Enea Parimbelli, Szymon Wilk, Stephen P. Kingwell, Pavel Andreev, Wojtek Michalowski
AMIA2
2018 Application of Structural and Textural Features from X-ray Images to Predict the Type of Bone Fracture Treatment
Anam Haq, Szymon Wilk
DOLAP2
2017 Using Constraint Logic Programming for the Verification of Customized Decision Models for Clinical Guidelines
Szymon Wilk, Adi Fux, Martin Michalowski, Mor Peleg, Pnina Soffer
AIME1
2017 Comprehensive mitigation framework for concurrent application of multiple clinical practice guidelines
Szymon Wilk, Martin Michalowski, Wojtek Michalowski, Daniela Rosu 0002, Marc Carrier, Mounira Kezadri
J. Biomed. Informatics1
2016 Aligning Interdisciplinary Healthcare Team Behavior with Workflow Execution: An Example of a Radical Prostatectomy Workflow
abstract
Operationalizing care delivery through an interdisciplinary healthcare team (IHT) requires knowledge about the overall structure of an IHT and the behavioral rules that "control" the dynamics of this structure interpreted as team and clinical leadership maintenance and task allocation. While progress has been made in understanding IHT structure, there is less work on the behavioral aspects of an IHT associated with its dynamics. In this paper we fill this void by extending our Team and Workflow Management Framework (TWMF) with a set of rules to operationalize IHT behavior in terms of clinical leadership, coordination of workflow execution over multiple days as part of continuity of care, and management of tasks, including urgent ones that prevent planned workflow execution. We briefly describe a proof-of-concept implementation of extended TWMF in the form of a computer system for supporting cooperative execution of clinical workflows by an IHT. The system is built on top of an existing business workflow execution engine and employs behavioral rules to control the IHT behavior. We also illustrate the operations of TWMF in a case study where an IHT is executing a workflow for the management of post-operative inpatient recovery after radical prostatectomy.
Szymon Wilk, Dympna O'Sullivan, Mounira Kezadri, Craig E. Kuziemsky, Daniela Rosu 0002, Wojtek Michalowski, Michael Fung Kee Fung
CBMS1
2016 Classification with test costs and background knowledge
Tomasz Lukaszewski, Szymon Wilk
Knowl. Based Syst.2
2015 Expanding a First-Order Logic Mitigation Framework to Handle Multimorbid Patient Preferences
Martin Michalowski, Szymon Wilk, Daniela Rosu 0002, Mounira Kezadri, Wojtek Michalowski, Marc Carrier
AMIA2
2014 A Framework for Incorporating Patient Preferences to Deliver Participatory Medicine via Interdisciplinary Healthcare Teams
Craig E. Kuziemsky, Davood Astaraky, Szymon Wilk, Wojtek Michalowski, Pavel Andreev
AMIA3
2014 First-Order Logic Theory for Manipulating Clinical Practice Guidelines Applied to Comorbid Patients: A Case Study
Martin Michalowski, Szymon Wilk, Xing Tan 0002, Wojtek Michalowski
AMIA2
2014 Sequential Classification by Exploring Levels of Abstraction
abstract
In the paper we describe a sequential classification scheme that iteratively explores levels of abstraction in the description of examples. These levels of abstraction represent attribute values of increasing precision. Specifically, we assume attribute values constitute an ontology (i.e., attribute value ontology) reflecting a domain-specific background knowledge, where more general values subsumes more precise ones. While there are approaches that consider levels of abstraction during learning, the novelty of our proposal consists in exploring levels of abstraction when classifying new examples. The described scheme is essential when tests that increase precision of example description are associated with costs – such a situation is often encountered in medical diagnosis. Experimental evaluation of the proposed classification scheme combined with ontological Bayes classifier (i.e., a näıve Bayes classifier expanded to handle attribute value ontologies) demonstrates that the classification accuracy obtained at higher levels of abstraction (i.e., more general description of classified examples) converges very quickly to the classification accuracy for classified examples represented precisely. This finding indicates we should be able to reduce the number of tests and thus limit their cost without deterioration of the prediction accuracy.
Tomasz Lukaszewski, Szymon Wilk
KES2
2013 Using Constraint Logic Programming to Implement Iterative Actions and Numerical Measures during Mitigation of Concurrently Applied Clinical Practice Guidelines
Martin Michalowski, Szymon Wilk, Wojtek Michalowski, Di Lin 0001, Ken Farion, Subhra Mohapatra
AIME2
2013 Mitigation of adverse interactions in pairs of clinical practice guidelines using constraint logic programming
Szymon Wilk, Wojtek Michalowski, Martin Michalowski, Ken Farion, Marisela Mainegra Hing, Subhra Mohapatra
J. Biomed. Informatics1
2012 Discovering the Preferences of Physicians with Regards to Rank-Ordered Medical Documents
Dympna O'Sullivan, Szymon Wilk, Wojtek Michalowski, Roman Slowinski, Roland Thomas, Ken Farion
IPMU (3)2
2012 Predicting the need for CT imaging in children with minor head injury using an ensemble of Naive Bayes classifiers
William Klement, Szymon Wilk, Wojtek Michalowski, Ken Farion, Martin H. Osmond, Vedat Verter
Artif. Intell. Medicine2
2012 IIvotes ensemble for imbalanced data
abstract
In the paper we present IIvotes – a new framework for constructing an ensemble of classifiers from imbalanced data. IIvotes incorporates the SPIDER method for selective data pre-processing into the adaptive Ivotes ensemble. Such an integration is aimed at improving balance between sensitivity and s pecificity (evaluated by the G-mean measure) for the minority class in comparison with single classifiers also combined with SPIDER. Using SPIDER to pre-process specific learning samples inside the ensemble improves sensitivity of derived component classifiers. At the same time the controlling mechanism of IIvotes ensures that overall accuracy (and thus specificity) is kept at a reasonable level. The new proposed IIvotes ensemble was thoroughly evaluated in a series of experiments where we tested it with symbolic (decision trees and rules) and non-symbolic (Naive Bayes) component classifiers. The results confirmed that combining SPIDER with an ensemble improved the performance (in terms of the G-mean measures) in comparison to a single classifier with SPIDER for all tested types of classifiers and two SPIDER pre-processing options (weak and strong amplification). These advantages were especially evident for decision trees and rules where differences between single and ensemble classifiers with SPIDER were more significant for both pre-processing options than for Naive Bayes. Moreover, the results demonstrated advantages of using a special abstaining classification strategy inside IIvotes rule ensembles, where component rule-based classifiers may refrain from predicting a class when in doubt. Abstaining rule ensembles performed much better with regard to G-mean than their non-abstaining variants.
Jerzy Blaszczynski, Magdalena Deckert, Jerzy Stefanowski, Szymon Wilk
Intell. Data Anal.4
2011 A Constraint Logic Programming Approach to Identifying Inconsistencies in Clinical Practice Guidelines for Patients with Comorbidity
Martin Michalowski, Marisela Mainegra Hing, Szymon Wilk, Wojtek Michalowski, Ken Farion
AIME3
2010 Automatic indexing and retrieval of encounter-specific evidence for point-of-care support
Dympna O'Sullivan, Szymon Wilk, Wojtek Michalowski, Ken Farion
J. Biomed. Informatics2
2008 A Constraint Satisfaction Approach to Data-Driven Implementation of Clinical Practice Guidelines
Craig E. Kuziemsky, Dympna O'Sullivan, Wojtek Michalowski, Szymon Wilk, Ken Farion
AMIA4
2008 Engineering of a Clinical Decision Support Framework for the Point of Care Use
Szymon Wilk, Wojtek Michalowski, Dympna O'Sullivan, Ken Farion, Stan Matwin
AMIA1
2008 Selective Pre-processing of Imbalanced Data for Improving Classification Performance
Jerzy Stefanowski, Szymon Wilk
DaWaK2
2006 Rough Sets for Handling Imbalanced Data: Combining Filtering and Rule-based Classifiers
Jerzy Stefanowski, Szymon Wilk
Fundam. Informaticae2
2005 Mining Clinical Data: Selecting Decision Support Algorithm for the MET-AP System
Jerzy Blaszczynski, Ken Farion, Wojtek Michalowski, Szymon Wilk, Steven Rubin, Dawid Weiss
AIME4
2004 Mobile Emergency Triage Support System
Wojtek Michalowski, Roman Slowinski, Szymon Wilk
AAAI3
2004 A Comparison of Two Approaches to Data Mining from Imbalanced Data
Jerzy W. Grzymala-Busse, Jerzy Stefanowski, Szymon Wilk
KES3
2003 Mobile clinical support system for pediatric emergencies
Wojtek Michalowski, Steven Rubin, Roman Slowinski, Szymon Wilk
Decis. Support Syst.4
1999 Rough Set Based Data Exploration Using ROSE System
Bartlomiej Predki, Szymon Wilk
ISMIS2