Demo Data from VLDB 2026 / reviewers in the wild / expert
Rainer Pepperkok
dblp:77/6680
· DBLP profile ↗
2ranked-venue papers
0as first author
1since 2021 · last 2021
0000-0002-9762-3583ORCID · corroborated
Domains — the database's venue-derived domains; a paper can count in several
Applied, interdisciplinary, general and emerging computing · 2 · 1 since 2021
Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.
| Interdisciplinary, comprehensive, and emerging computing
2 papers |
Medical and health informatics · 89% Bioinformatics and computational biology · 11% |
Topics — the 3 heaviest of 3, each with the papers that count most for it
| Topic | Weight | Papers | Last | Evidence papers |
|---|---|---|---|---|
Medical and health informatics
medical imaging |
0.5 | 1 | 2021 | BigDataProcessor2: a free and open-source Fiji plugin for inspection and processing of TB sized image data · Bioinform. 2021 |
Bioinformatics and computational biology › protein analysis › protein bioinformatics
protein annotation |
0.0 | 1 | 2004 | ??Harvester??: a fast meta search engine of human protein resources · Bioinform. 2004 |
Bioinformatics and computational biology › data integration
database integration |
0.0 | 1 | 2004 | ??Harvester??: a fast meta search engine of human protein resources · Bioinform. 2004 |
Methods — techniques the papers use, named apart from their topics
image processing · 0.5drift correction · 0.5chromatic correction · 0.5
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2021 | BigDataProcessor2: a free and open-source Fiji plugin for inspection and processing of TB sized image dataabstractSUMMARY: Modern bioimaging and related areas such as sensor technology have undergone tremendous development over the last few years. As a result, contemporary imaging techniques, particularly electron microscopy (EM) and light sheet microscopy, can frequently generate datasets attaining sizes of several terabytes (TB). As a consequence, even seemingly simple data operations such as cropping, chromatic- and drift-corrections and even visualisation, poses challenges when applied to thousands of time points or tiles. To address this we developed BigDataProcessor2-a Fiji plugin facilitating processing workflows for TB sized image datasets. AVAILABILITY AND IMPLEMENTATION: BigDataProcessor2 is available as a Fiji plugin via the BigDataProcessor update site. The application is implemented in Java and the code is publicly available on GitHub (https://github.com/bigdataprocessor/bigdataprocessor2). SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Christian Tischer 0001, Ashis Ravindran, Sabine Reither, Nicolas Chiaruttini, Rainer Pepperkok, Nils Norlin |
Bioinform. | 5 |
| 2004 | ??Harvester??: a fast meta search engine of human protein resourcesabstractSUMMARY: We have developed a Web-based tool named 'Harvester' that bulk-collects bioinformatic data on human proteins from various databases and prediction servers. The information on every single protein is assembled on a single HTML page as a combination of database screen-shots and plain text. A full text meta search engine, similar to Google trade mark, allows screening of the whole genome proteome for current protein functions and predictions in a few seconds. With Harvester it is now possible to compare and check the quality of different database entries and prediction algorithms on a single page. A feedback forum allows users to comment on Harvester and to report database inconsistencies. AVAILABILITY: The service is freely available to the academic community at http://harvester.embl.de. Urban Liebel, Bjoern Kindler, Rainer Pepperkok |
Bioinform. | 3 |