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Pierre-Yves Chibon

dblp:80/11251 · DBLP profile ↗
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1ranked-venue papers
1as first author
0since 2021 · last 2012
—ORCID · none

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 1 · 1 first-author

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology › genomics › computational genomics
gene prioritization
0.112012
Marker2sequence, mine your QTL regions for candidate genes · Bioinform. 2012
Bioinformatics and computational biology › multi-omics data integration
genomic data integration
0.112012
Marker2sequence, mine your QTL regions for candidate genes · Bioinform. 2012
Bioinformatics and computational biology › statistical genetics
quantitative trait locus analysis
0.012012
Marker2sequence, mine your QTL regions for candidate genes · Bioinform. 2012

Methods — techniques the papers use, named apart from their topics

keyword-based filtering · 0.1data integration · 0.1
YearPublicationVenuePosition
2012 Marker2sequence, mine your QTL regions for candidate genes
abstract
UNLABELLED: Marker2sequence (M2S) aims at mining quantitative trait loci (QTLs) for candidate genes. For each gene, within the QTL region, M2S uses data integration technology to integrate putative gene function with associated gene ontology terms, proteins, pathways and literature. As a typical QTL region easily contains several hundreds of genes, this gene list can then be further filtered using a keyword-based query on the aggregated annotations. M2S will help breeders to identify potential candidate genes for their traits of interest. AVAILABILITY: Marker2sequence is freely accessible at http://www.plantbreeding.wur.nl/BreeDB/marker2seq/. The source code can be obtained at https://github.com/PBR/Marker2Sequence. CONTACT: [email protected]
Pierre-Yves Chibon, Heiko Schoof, Richard G. F. Visser, Richard Finkers
Bioinform.1