VLDB 2026 Research / reviewers in the wild / expert
Fenglong Ma
dblp:85/10856
· DBLP profile ↗
71ranked-venue papers in the field
8as first author
41since 2021 · last 2026
0000-0002-4999-0303ORCID · conflict
Domains — venue-derived; a paper can count in several
Data Mining & Knowledge Discovery · 45 (6 first)Information Retrieval & Web Search · 20 (2 first)Database Systems & Data Management · 3Big Data, Cloud & Distributed Data Systems · 3
| Year | Publication | Venue | Position |
|---|---|---|---|
| 2026 | CALM-ECG: Toward Accurate and Explainable ECG Analysis Through Deep Learning and Vision-Language Model Integration
Sileshi Nibret Zeleke, Mario A. Bochicchio, Aofei Chang, Fenglong Ma |
PAKDD (3) | 4 |
| 2026 | SEP-Attack: A Simple and Effective Paradigm for Transfer-Based Textual Adversarial Attack
Han Liu 0008, Zhi Xu 0008, Xiaotong Zhang 0003, Feng Zhang 0027, Xiaoming Xu 0003, Wei Wang 0077, Fenglong Ma, Hong Yu 0005 |
WWW | 7 |
| 2026 | GPR: Empowering Generation with Graph-Pretrained Retriever
Xiaochen Wang 0002, Zongyu Wu 0001, Yuan Zhong 0002, Xiang Zhang 0001, Suhang Wang, Fenglong Ma |
WWW | 6 |
| 2026 | Hierarchical Graph-Bag-Network for Self-Supervised Multi-Graph LearningabstractMulti-Graph Learning (MGL) is a fundamental machine learning paradigm that represents objects as bags-of-graphs, each encoding a distinct structural property, and has broad applications in bioinformatics, chemistry, computing power networks, and software defect detection. However, the inherent scarcity of labeled data poses a significant bottleneck for supervised MGL approaches. While self-supervised contrastive learning offers a compelling solution, its direct application to MGL faces three key challenges: (1) existing graph neural networks, primarily for single-graph modeling, struggle to yield discriminative bag-level representations from bags-of-graphs; (2) conventional contrastive objectives are limited to single-level settings, failing to capture cross-hierarchical dependencies; and (3) standard data augmentation often disrupts intrinsic graph and bag structures, undermining semantic consistency. To address these issues, we propose the Hierarchical Graph-Bag-Network (HGBN), a self-supervised MGL framework that constructs hierarchical representations in the form of a graph-bag-network. HGBN employs an asymmetric hierarchical graph neural network to learn discriminative graph-level and bag-level representations, introduces cross-hierarchical contrastive objectives to align graph-level and bag-level semantics, and leverages the asymmetric network outputs to form positive and negative pairs, preserving intrinsic structural and semantic consistency. Experiments on eight benchmark multi-graph datasets demonstrate that HGBN consistently outperforms both supervised and self-supervised state-of-the-art baselines, achieving average improvements of 4.82% in accuracy and F1 score. Meixia Wang, Yuhai Zhao, Zhengkui Wang, Fenglong Ma, Yejiang Wang, Miaomiao Huang, Fazal Wahab, Wen Shan, Xingwei Wang 0001 |
WWW | 4 |
| 2025 | MedDiTPro: A Prompt-Guided Diffusion Transformer for Multimodal Longitudinal Medical Data SynthesisabstractDiffusion models have recently emerged as a state-of-the-art approach for synthetic Electronic Health Record (EHR) generation, offering superior fidelity and diversity over traditional generative models. However, existing diffusion-based methods struggle with unique challenges: limited representation learning and modality utilization, where they fail to explicitly capture inter-modality dependencies and fine-grained code-level interactions, and constrained adaptability due to reliance on U-Net-based architectures, which are not well-suited for handling the heterogeneous and evolving nature of EHR data. Furthermore, current evaluation paradigms rely on either perplexity-based sequence modeling or global distributional measures, lacking robustness in assessing both intra-visit code relationships and inter-visit temporal patterns. To address these limitations, we propose MedDiTPro, a diffusion transformer-based framework that enhances multimodal EHR generation by integrating structured modality-aware guidance. Through a unified transformer for intra-visit representation learning, a modality-specific and datawise prompt learner, and a diffusion transformer with structured guidance, MedDiTPro achieves state-of-the-art performance in generating diverse and clinically meaningful synthetic records. Extensive experiments on publicly available datasets demonstrate that MedDiTPro achieves state-of-the-art fidelity, privacy preservation, and utility. Yuan Zhong 0002, Xiaochen Wang 0002, Jiaqi Wang 0002, Xiaokun Zhang 0001, Fenglong Ma |
KDD (2) | 5 |
| 2025 | Asymmetrical Reciprocity-based Federated Learning for Resolving Disparities in Medical DiagnosisabstractGeographic health disparities pose a pressing global challenge, particularly in underserved regions of low- and middle-income nations. Addressing this issue requires a collaborative approach to enhance healthcare quality, leveraging support from medically more developed areas. Federated learning emerges as a promising tool for this purpose. However, the scarcity of medical data and limited computation resources in underserved regions make collaborative training of powerful machine learning models challenging. Furthermore, there exists an asymmetrical reciprocity between underserved and developed regions. To overcome these challenges, we propose a novel cross-silo federated learning framework, named FedHelp, aimed at alleviating geographic health disparities and fortifying the diagnostic capabilities of underserved regions. Specifically, FedHelp leverages foundational model knowledge via one-time API access to guide the learning process of underserved small clients, addressing the challenge of insufficient data. Additionally, we introduce a novel asymmetric dual knowledge distillation module to manage the issue of asymmetric reciprocity, facilitating the exchange of necessary knowledge between developed large clients and underserved small clients. We validate the effectiveness and utility of FedHelp through extensive experiments on both medical image classification and segmentation tasks. The experimental results demonstrate significant performance improvement compared to state-of-the-art baselines, particularly benefiting clients in underserved regions. Jiaqi Wang 0002, Ziyi Yin 0003, Quanzeng You, Lingjuan Lyu, Fenglong Ma |
KDD (1) | 5 |
| 2025 | SEPTQ: A Simple and Effective Post-Training Quantization Paradigm for Large Language ModelsabstractLarge language models (LLMs) have shown remarkable performance in various domains, but they are constrained by massive computational and storage costs. Quantization, an effective technique for compressing models to fit resource-limited devices while preserving generative quality, encompasses two primary methods: quantization aware training (QAT) and post-training quantization (PTQ). QAT involves additional retraining or fine-tuning, thus inevitably resulting in high training cost and making it unsuitable for LLMs. Consequently, PTQ has become the research hotspot in recent quantization methods. However, existing PTQ methods usually rely on various complex computation procedures and suffer from considerable performance degradation under low-bit quantization settings. To alleviate the above issues, we propose a simple and effective post-training quantization paradigm for LLMs, named SEPTQ. Specifically, SEPTQ first calculates the importance score for each element in the weight matrix and determines the quantization locations in a static global manner. Then it utilizes the mask matrix which represents the important locations to quantize and update the associated weights column-by-column until the appropriate quantized weight matrix is obtained. Compared with previous methods, SEPTQ simplifies the post-training quantization procedure into only two steps, and considers the effectiveness and efficiency simultaneously. Experimental results on various datasets across a suite of models ranging from millions to billions in different quantization bit-levels demonstrate that SEPTQ significantly outperforms other strong baselines, especially in low-bit quantization scenarios. Han Liu 0008, Xiaotong Zhang 0003, Changya Li, Feng Zhang 0027, Wei Wang 0077, Fenglong Ma, Hong Yu 0005 |
KDD (1) | 7 |
| 2025 | Brain Effective Connectivity Estimation via Fourier Spatiotemporal AttentionabstractEstimating brain effective connectivity (EC) from functional magnetic resonance imaging (fMRI) data can aid in comprehending the neural mechanisms underlying human behavior and cognition, providing a foundation for disease diagnosis. However, current spatiotemporal attention modules handle temporal and spatial attention separately, extracting temporal and spatial features either sequentially or in parallel. These approach overlooks the inherent spatiotemporal correlations present in real world fMRI data. Additionally, the presence of noise in fMRI data further limits the performance of existing methods. In this paper, we propose a novel brain effective connectivity estimation method based on Fourier spatiotemporal attention (FSTA-EC), which combines Fourier attention and spatiotemporal attention to simultaneously capture inter-series (spatial) dynamics and intra-series (temporal) dependencies from high-noise fMRI data. Specifically, Fourier attention is designed to convert the high-noise fMRI data to frequency domain, and map the denoised fMRI data back to physical domain, and spatiotemporal attention is crafted to simultaneously learn spatiotemporal dynamics. Furthermore, through a series of proofs, we demonstrate that incorporating learnable filters into fast Fourier transform and inverse fast Fourier transform processes is mathematically equivalent to performing cyclic convolution. The experimental results on simulated and real-resting-state fMRI datasets demonstrate that the proposed method exhibits superior performance when compared to state-of-the-art methods. The code is available at https://github.com/XiongWenXww/FSTA. Jinduo Liu 0001, Junzhong Ji, Fenglong Ma |
KDD (1) | 4 |
| 2025 | Towards Collaborative Fairness in Federated Learning Under Imbalanced Covariate ShiftabstractCollaborative fairness is a crucial challenge in federated learning. However, existing approaches often overlook a practical yet complex form of heterogeneity: imbalanced covariate shift. We provide a theoretical analysis of this setting, which motivates the design of FedAKD (Federated Asynchronous Knowledge Distillation) - a simple yet effective approach that balances accurate prediction with collaborative fairness. FedAKD consists of client and server updates. In the client update, we introduce a novel asynchronous knowledge distillation strategy based on our preliminary analysis, which reveals that while correctly predicted samples exhibit similar feature distributions across clients, incorrectly predicted samples show significant variability. This suggests that imbalanced covariate shift primarily arises from misclassified samples. Leveraging this insight, our approach first applies traditional knowledge distillation to update client models while keeping the global model fixed. Next, we select the correctly predicted high-confidence samples and update the global model using these samples, while keeping the client models fixed. The server update simply aggregates all client models. We further provide a theoretical proof of FedAKD's convergence. Experimental results on both public datasets (FashionMNIST and CIFAR10) and a real-world Electronic Health Records (EHR) dataset demonstrate that FedAKD significantly improves collaborative fairness, enhances predictive accuracy, and fosters client participation, even under highly heterogeneous data distributions. Tianrun Yu, Jiaqi Wang 0002, Haoyu Wang 0004, Mingquan Lin, Han Liu 0008, Nelson S. Yee, Fenglong Ma |
KDD (2) | 7 |
| 2025 | A Survey on Side Information-Driven Session-Based Recommendation: From a Data-Centric PerspectiveabstractSession-based recommendation is gaining increasing attention due to its practical value in predicting the intents of anonymous users based on limited behaviors. Emerging efforts incorporate various side information to alleviate inherent data scarcity issues in this task, leading to impressive performance improvements. The core of side information-driven session-based recommendation is the discovery and utilization of diverse data. In this survey, we provide a comprehensive review of this task from a data-centric perspective. Specifically, this survey commences with a clear formulation of the task. This is followed by a detailed exploration of various benchmarks rich in side information that are pivotal for advancing research in this field. Afterwards, we delve into how different types of side information enhance the task, underscoring data characteristics and utility. Moreover, we discuss the usage of various side information, including data encoding, data injection, and involved techniques. A systematic review of research progress is then presented, with the taxonomy by the types of side information. Finally, we summarize the current limitations and present the future prospects of this vibrant topic. Xiaokun Zhang 0001, Bo Xu 0009, Chenliang Li 0005, Bowei He, Hongfei Lin, Chen Ma 0001, Fenglong Ma |
IEEE Trans. Knowl. Data Eng. | 7 |
| 2024 | Mitigating Pooling Bias in E-commerce Search via False Negative EstimationabstractEfficient and accurate product relevance assessment is critical for user experiences and business success. Training a proficient relevance assessment model requires high-quality query-product pairs, often obtained through negative sampling strategies. Unfortunately, current methods introduce pooling bias by mistakenly sampling false negatives, diminishing performance and business impact. To address this, we present Bias-mitigating Hard Negative Sampling (BHNS), a novel negative sampling strategy tailored to identify and adjust for false negatives, building upon our original False Negative Estimation algorithm. Our experiments in the Instacart search setting confirm BHNS as effective for practical e-commerce use. Furthermore, comparative analyses on public dataset showcase its domain-agnostic potential for diverse applications. Xiaochen Wang 0002, Ruhan Zhang, Taesik Na, Tejaswi Tenneti, Haixun Wang, Fenglong Ma |
KDD | 8 |
| 2024 | Synthesizing Multimodal Electronic Health Records via Predictive Diffusion ModelsabstractSynthesizing electronic health records (EHR) data has become a preferred strategy to address data scarcity, improve data quality, and model fairness in healthcare. However, existing approaches for EHR data generation predominantly rely on state-of-the-art generative techniques like generative adversarial networks, variational autoencoders, and language models. These methods typically replicate input visits, resulting in inadequate modeling of temporal dependencies between visits and overlooking the generation of time information, a crucial element in EHR data. Moreover, their ability to learn visit representations is limited due to simple linear mapping functions, thus compromising generation quality. To address these limitations, we propose a novel EHR data generation model called EHRPD. It is a diffusion-based model designed to predict the next visit based on the current one while also incorporating time interval estimation. To enhance generation quality and diversity, we introduce a novel time-aware visit embedding module and a pioneering predictive denoising diffusion probabilistic model (P-DDPM). Additionally, we devise a predictive U-Net (PU-Net) to optimize P-DDPM. We conduct experiments on two public datasets and evaluate EHRPD from fidelity, privacy, and utility perspectives. The experimental results demonstrate the efficacy and utility of the proposed EHRPD in addressing the aforementioned limitations and advancing EHR data generation. Yuan Zhong 0002, Xiaochen Wang 0002, Jiaqi Wang 0002, Xiaokun Zhang 0001, Yaqing Wang 0001, Mengdi Huai, Cao Xiao, Fenglong Ma |
KDD | 8 |
| 2024 | Rethinking Personalized Federated Learning with Clustering-Based Dynamic Graph Propagation
Jiaqi Wang 0002, Yuzhong Chen 0004, Yuhang Wu 0002, Mahashweta Das, Hao Yang 0007, Fenglong Ma |
PAKDD (3) | 6 |
| 2024 | Leveraging Foundation Models for Multi-modal Federated Learning with Incomplete Modality
Liwei Che, Jiaqi Wang 0002, Xinyue Liu 0002, Fenglong Ma |
ECML/PKDD (9) | 4 |
| 2024 | Automated Fusion of Multimodal Electronic Health Records for Better Medical PredictionsabstractThe widespread adoption of Electronic Health Record (EHR) systems in healthcare institutes has generated vast amounts of medical data, offering significant opportunities for improving healthcare services through deep learning techniques. However, the complex and diverse modalities and feature structures in real-world EHR data pose great challenges for deep learning model design. To address the multi-modality challenge in EHR data, current approaches primarily rely on hand-crafted model architectures based on intuition and empirical experiences, leading to sub-optimal model architectures and limited performance. Therefore, to automate the process of model design for mining EHR data, we propose a novel neural architecture search (NAS) framework named AutoFM, which can automatically search for the optimal model architectures for encoding diverse input modalities and fusion strategies. We conduct thorough experiments on real-world multi-modal EHR data and prediction tasks, and the results demonstrate that our framework not only achieves significant performance improvement over existing state-of-the-art methods but also discovers meaningful network architectures effectively. Suhan Cui, Jiaqi Wang 0002, Yuan Zhong 0002, Han Liu 0008, Ting Wang 0006, Fenglong Ma |
SDM | 6 |
| 2024 | MedDiffusion: Boosting Health Risk Prediction via Diffusion-based Data AugmentationabstractHealth risk prediction aims to forecast the potential health risks that patients may face using their historical Electronic Health Records (EHR). Although several effective models have developed, data insufficiency is a key issue undermining their effectiveness. Various data generation and augmentation methods have been introduced to mitigate this issue by expanding the size of the training data set through learning underlying data distributions. However, the performance of these methods is often limited due to their task-unrelated design. To address these shortcomings, this paper introduces a novel, end-to-end diffusion-based risk prediction model, named MedDiffusion. It enhances risk prediction performance by creating synthetic patient data during training to enlarge sample space. Furthermore, MedDiffusion discerns hidden relationships between patient visits using a step-wise attention mechanism, enabling the model to automatically retain the most vital information for generating high-quality data. Experimental evaluation on four real-world medical datasets demonstrates that MedDiffusion outperforms 14 cutting-edge baselines in terms of PR-AUC, F1, and Cohen's Kappa. We also conduct ablation studies and benchmark our model against GAN-based alternatives to further validate the rationality and adaptability of our model design. Additionally, we analyze generated data to offer fresh insights into the model's interpretability. The source code is available via https://shorturl.at/aerT0. Yuan Zhong 0002, Suhan Cui, Jiaqi Wang 0002, Xiaochen Wang 0002, Ziyi Yin 0003, Yaqing Wang 0001, Houping Xiao, Mengdi Huai, Ting Wang 0006, Fenglong Ma |
SDM | 10 |
| 2024 | Clinical Trial Retrieval via Multi-grained Similarity LearningabstractClinical trial analysis is one of the main business directions and services in IQVIA, and reviewing past similar studies is one of the most critical steps before starting a commercial clinical trial. The current review process is manual and time-consuming, requiring a clinical trial analyst to manually search through an extensive clinical trial database and then review all candidate studies. Therefore, it is of great interest to develop an automatic retrieval algorithm to select similar studies by giving new study information. To achieve this goal, we propose a novel group-based trial similarity learning network named GTSLNet, consisting of two kinds of similarity learning modules. The pair-wise section-level similarity learning module aims to compare the query trial and the candidate trial from the abstract semantic level via the proposed section transformer. Meanwhile, a word-level similarity learning module uses the word similarly matrix to capture the low-level similarity information. Additionally, an aggregation module combines these similarities. To address potential false negatives and noisy data, we introduce a variance-regularized group distance loss function. Experiment results show that the proposed GTSLNet significantly and consistently outperforms state-of-the-art baselines. Junyu Luo 0001, Cheng Qian 0001, Lucas Glass, Fenglong Ma |
SIGIR | 4 |
| 2024 | Disentangling ID and Modality Effects for Session-based RecommendationabstractSession-based recommendation aims to predict intents of anonymous users based on their limited behaviors. Modeling user behaviors involves two distinct rationales: co-occurrence patterns reflected by item IDs, and fine-grained preferences represented by item modalities (e.g., text and images). However, existing methods typically entangle these causes, leading to their failure in achieving accurate and explainable recommendations. To this end, we propose a novel framework DIMO to disentangle the effects of ID and modality in the task. DIMO aims to disentangle these causes at both item and session levels. At the item level, we introduce a co-occurrence representation schema to explicitly incorporate co-occurrence patterns into ID representations. Simultaneously, DIMO aligns different modalities into a unified semantic space to represent them uniformly. At the session level, we present a multi-view self-supervised disentanglement, including proxy mechanism and counterfactual inference, to disentangle ID and modality effects without supervised signals. Leveraging these disentangled causes, DIMO provides recommendations via causal inference and further creates two templates for generating explanations. Extensive experiments on multiple real-world datasets demonstrate the consistent superiority of DIMO over existing methods. Further analysis also confirms DIMO's effectiveness in generating explanations. Xiaokun Zhang 0001, Bo Xu 0009, Zhaochun Ren, Xiaochen Wang 0002, Hongfei Lin, Fenglong Ma |
SIGIR | 6 |
| 2024 | FineRec: Exploring Fine-grained Sequential RecommendationabstractSequential recommendation is dedicated to offering items of interest for users based on their history behaviors. The attribute-opinion pairs, expressed by users in their reviews for items, provide the potentials to capture user preferences and item characteristics at a fine-grained level. To this end, we propose a novel framework FineRec that explores the attribute-opinion pairs of reviews to finely handle sequential recommendation. Specifically, we utilize a large language model to extract attribute-opinion pairs from reviews. For each attribute, a unique attribute-specific user-opinion-item graph is created, where corresponding opinions serve as the edges linking heterogeneous user and item nodes. Afterwards, we devise a diversity-aware convolution operation to aggregate information within the graphs, enabling attribute-specific user and item representation learning. Ultimately, we present an interaction-driven fusion mechanism to integrate attribute-specific user/item representations across all attributes for generating recommendations. Extensive experiments conducted on several real-world datasets demonstrate the superiority of our FineRec over existing state-ofthe-art methods. Further analysis also verifies the effectiveness of our fine-grained manner in handling the task. Xiaokun Zhang 0001, Bo Xu 0009, Youlin Wu, Yuan Zhong 0002, Hongfei Lin, Fenglong Ma |
SIGIR | 6 |
| 2024 | Beyond Co-Occurrence: Multi-Modal Session-Based RecommendationabstractSession-based recommendation is devoted to characterizing preferences of anonymous users based on short sessions. Existing methods mostly focus on mining limited item co-occurrence patterns exposed by item ID within sessions, while ignoring what attracts users to engage with certain items is rich multi-modal information displayed on pages. Generally, the multi-modal information can be classified into two categories: descriptive information (e.g., item images and description text) and numerical information (e.g., price). In this paper, we aim to improve session-based recommendation by modeling the above multi-modal information holistically. There are mainly three issues to reveal user intent from multi-modal information: (1) How to extract relevant semantics from heterogeneous descriptive information with different noise? (2) How to fuse these heterogeneous descriptive information to comprehensively infer user interests? (3) How to handle probabilistic influence of numerical information on user behaviors? To solve above issues, we propose a novel multi-modal session-based recommendation (MMSBR) that models both descriptive and numerical information under a unified framework. Specifically, a pseudo-modality contrastive learning is devised to enhance the representation learning of descriptive information. Afterwards, a hierarchical pivot transformer is presented to fuse heterogeneous descriptive information. Moreover, we represent numerical information with Gaussian distribution and design a Wasserstein self-attention to handle the probabilistic influence mode. Extensive experiments on three real-world datasets demonstrate the effectiveness of the proposed MMSBR. Further analysis also proves that our MMSBR can alleviate the cold-start problem in SBR effectively. Xiaokun Zhang 0001, Bo Xu 0009, Fenglong Ma, Chenliang Li 0005, Liang Yang 0003, Hongfei Lin |
IEEE Trans. Knowl. Data Eng. | 3 |
| 2024 | Bi-preference Learning Heterogeneous Hypergraph Networks for Session-based RecommendationabstractSession-based recommendation intends to predict next purchased items based on anonymous behavior sequences. Numerous economic studies have revealed that item price is a key factor influencing user purchase decisions. Unfortunately, existing methods for session-based recommendation only aim at capturing user interest preference, while ignoring user price preference. Actually, there are primarily two challenges preventing us from accessing price preference. First, the price preference is highly associated to various item features (i.e., category and brand), which asks us to mine price preference from heterogeneous information. Second, price preference and interest preference are interdependent and collectively determine user choice, necessitating that we jointly consider both price and interest preference for intent modeling. To handle above challenges, we propose a novel approach Bi-Preference Learning Heterogeneous Hypergraph Networks (BiPNet) for session-based recommendation. Specifically, the customized heterogeneous hypergraph networks with a triple-level convolution are devised to capture user price and interest preference from heterogeneous features of items. Besides, we develop a Bi-Preference Learning schema to explore mutual relations between price and interest preference and collectively learn these two preferences under the multi-task learning architecture. Extensive experiments on multiple public datasets confirm the superiority of BiPNet over competitive baselines. Additional research also supports the notion that the price is crucial for the task. Xiaokun Zhang 0001, Bo Xu 0009, Fenglong Ma, Chenliang Li 0005, Yuan Lin 0001, Hongfei Lin |
ACM Trans. Inf. Syst. | 3 |
| 2023 | Boosting Meta-Learning Cold-Start Recommendation with Graph Neural NetworkabstractMeta-learning methods have shown to be effective in dealing with cold-start recommendation. However, most previous methods rely on an ideal assumption that there exists a similar data distribution between source and target tasks, which are unsuitable for the scenario that only extremely limited number of new user or item interactions are available. In this paper, we propose to boost meta-learning cold-start recommendation with graph neural network (MeGNN). First, it utilizes the global neighborhood translation learning to obtain consistent potential interactions for all new user and item nodes, which can refine their representations. Second, it employs the local neighborhood translation learning to predict specific potential interactions for each node, thus guaranteeing the personalized requirement. In experiments, we combine MeGNN with two representative meta-learning models MeLU and TaNP. Extensive results on two widely-used datasets show the superiority of MeGNN in four different scenarios. Han Liu 0008, Hongxiang Lin, Xiaotong Zhang 0003, Fenglong Ma, Hongyang Chen 0001, Lei Wang 0005, Hong Yu 0005, Xianchao Zhang 0001 |
CIKM | 4 |
| 2023 | ClinicalRisk: A New Therapy-related Clinical Trial Dataset for Predicting Trial Status and Failure ReasonsabstractClinical trials aim to study new tests and evaluate their effects on human health outcomes, which has a huge market size. However, carrying out clinical trials is expensive and time-consuming and often ends in no results. It will revolutionize clinical practice if we can develop an effective model to automatically estimate the status of a clinical trial and find out possible failure reasons. However, it is challenging to develop such a model because of the lack of a benchmark dataset. To address these challenges, in this paper, we first build a new dataset by extracting the publicly available clinical trial reports from ClinicalTrials.gov. The associated status of each report is treated as the status label. To analyze the failure reasons, domain experts help us manually annotate each failed report based on the description associated with it. More importantly, we examine several state-of-the-art text classification baselines on this task and find out that the unique format of the clinical trial protocols plays an essential role in affecting prediction accuracy, demonstrating the need for specially designed clinical trial classification models. Junyu Luo 0001, Zhi Qiao 0007, Lucas Glass, Cao Xiao, Fenglong Ma |
CIKM | 5 |
| 2023 | pADR: Towards Personalized Adverse Drug Reaction Prediction by Modeling Multi-sourced DataabstractPredicting adverse drug reactions (ADRs) of drugs is one of the most critical steps in drug development. By pre-estimating the adverse reactions, researchers and drug development companies can greatly prevent the potential ADR risks and tragedies. However, the current ADR prediction methods suffer from several limitations. First, the prediction results are based on pure drug-related information, which makes them impossible to be directly applied for the personalized ADR prediction task. The lack of personalization of models also makes rare adverse events hard to be predicted. Therefore, it is of great interest to develop a new personalized ADR prediction method by introducing additional sources, e.g., patient health records. However, few methods have tried to use additional sources. In the meantime, the variety of different source formats and structures makes this task more challenging. To address the above challenges, we propose a novel personalized multi-sourced-based drug adverse reaction prediction model named pADR. pADR first works on every single source to transform them into proper representations. Next, a hierarchical multi-sourced Transformer is designed to automatically model the interactions between different sources and fuse them together for the final adverse event prediction. Experimental results on a new multi-sourced ADR prediction dataset show that PADR outperforms state-of-the-art drug-based baselines. Moreover, the case and ablation studies also illustrate the effectiveness of our proposed fusion strategies and the reasonableness of each module design. Junyu Luo 0001, Cheng Qian 0001, Xiaochen Wang 0002, Lucas Glass, Fenglong Ma |
CIKM | 5 |
| 2023 | PAT: Geometry-Aware Hard-Label Black-Box Adversarial Attacks on TextabstractDespite a plethora of prior explorations, conducting text adversarial attacks in practical settings is still challenging with the following constraints: black box -- the inner structure of the victim model is unknown; hard label -- the attacker only has access to the top-1 prediction results; and semantic preservation - the perturbation needs to preserve the original semantics. In this paper, we present PAT, a novel adversarial attack method employed under all these constraints. Specifically, PAT explicitly models the adversarial and non-adversarial prototypes and incorporates them to measure semantic changes for replacement selection in the hard-label black-box setting to generate high-quality samples. In each iteration, PAT finds original words that can be replaced back and selects better candidate words for perturbed positions in a geometry-aware manner guided by this estimation, which maximally improves the perturbation construction and minimally impacts the original semantics. Extensive evaluation with benchmark datasets and state-of-the-art models shows that PAT outperforms existing text adversarial attacks in terms of both attack effectiveness and semantic preservation. Moreover, we validate the efficacy of PAT against industry-leading natural language processing platforms in real-world settings. Muchao Ye, Chenglin Miao, Han Liu 0008, Ting Wang 0006, Fenglong Ma |
KDD | 6 |
| 2023 | Knowledge-Enhanced Semi-Supervised Federated Learning for Aggregating Heterogeneous Lightweight Clients in IoTabstractFederated learning (FL) enables multiple clients to train models collaboratively without sharing local data, which has achieved promising results in different areas, including the Internet of Things (IoT). However, end IoT devices do not have abilities to automatically annotate their collected data, which leads to the label shortage issue at the client side. To collaboratively train an FL model, we can only use a small number of labeled data stored on the server. This is a new yet practical scenario in federated learning, i.e., labels-at-server semi-supervised federated learning (SemiFL). Although several SemiFL approaches have been proposed recently, none of them can focus on the personalization issue in their model design. IoT environments make SemiFL more challenging, as we need to take device computational constraints and communication cost into consideration simultaneously. To tackle these new challenges together, we propose a novel SemiFL framework named pFedKnow. pFedKnow generates lightweight personalized client models via neural network pruning techniques to reduce communication cost. Moreover, it incorporates pretrained large models as prior knowledge to guide the aggregation of personalized client models and further enhance the framework performance. Experiment results on both image and text datasets show that the proposed pFedKnow outperforms state-of-the-art baselines as well as reducing considerable communication cost. The source code of the proposed pFedKnow is available at https://github.com/JackqqWang/pfedknow/tree/master. Jiaqi Wang 0002, Shenglai Zeng, Zewei Long, Yaqing Wang 0001, Houping Xiao, Fenglong Ma |
SDM | 6 |
| 2022 | MedSkim: Denoised Health Risk Prediction via Skimming Medical Claims DataabstractHealth risk prediction is a challenge task that aims to predict whether patients would suffer from a certain disease/condition in the near future based on their historical EHR data. Although existing approaches can achieve better performance, none of them can deal with the noise existing in the EHR data explicitly. In this paper, we hypothesize that automatically removing noise from EHR data should help the models further improve the performance. Correspondingly, we propose a novel model named MedSkim, which is able to automatically rule out irrelevant visits and codes by effectively skimming through the EHR data. In particular, the proposed model has a code selection module that can directly make a skipping decision to each individual diagnosis codes and then remove the target-irrelevant ones. A backward probing RNN (BPRNN) is designed to reversely process the EHR data and provide a coarse grained representation learning for visits. Besides, a forward skipping RNN (FSRNN) is proposed to read the EHR in a preceding way and dynamically select important visits and codes based on the results of previous two modules. Finally, the risk prediction module uses the output hidden states from FSRNN for generating the final representation to make predictions. Additionally, we also design an extra regularization term based on the skip rate of the model and combine it with standard cross entropy loss to train the model in an end-to-end setting. Experimental results show that MedSkim achieves the best performance on three real-world datasets compared with the state-of-the-art baselines in terms of PR-AUC, F1 and Cohen’s Kappa. Moreover, the ablation study and case study confirm that the proposed MedSkim is reasonable and effective for removing noise from EHR data1.1The source code of the proposed MedSkim is available at https://github.com/SH-Src/MedSkim Suhan Cui, Junyu Luo 0001, Muchao Ye, Jiaqi Wang 0002, Ting Wang 0006, Fenglong Ma |
ICDM | 6 |
| 2022 | Heterogeneous Information Enhanced Prerequisite Learning in Massive Open Online CoursesabstractThe knowledge concept prerequisites describing the dependencies are critical for fundamental tasks such as material recommendations and there are a huge amount of concepts in Massive Open Online Courses (MOOCs). Thus it is necessary to develop automatic prerequisite relation annotation methods. Recently, a few methods have shown their effectiveness in discovering knowledge concept prerequisites in Moocs automatically. However, they suffer from two common issues, i.e., knowledge concepts are not thoroughly learnt, and informative supervision sources are ignored. To overcome these issues, we propose an end-to-end framework to incorporate the rich heterogeneous information in MOOCs, including the semantic, contextual and structural information of the learning materials as well as student video watching behaviors. Such useful information is not only used to derive entity representations but also as supervision to improve the prerequisite learning task. Experimental results on two public datasets show that the proposed framework outperforms state-of-the-art baselines in terms of precision, recall and F1 values and improves up to 9% in terms of F1 metrics. Besides, ablation study demonstrates the effectiveness of the proposed framework. Fenglong Ma, Yaqing Wang 0001, Jing Gao 0004 |
ICDM | 2 |
| 2022 | LeapAttack: Hard-Label Adversarial Attack on Text via Gradient-Based OptimizationabstractGenerating text adversarial examples in the hard-label setting is a more realistic and challenging black-box adversarial attack problem, whose challenge comes from the fact that gradient cannot be directly calculated from discrete word replacements. Consequently, the effectiveness of gradient-based methods for this problem still awaits improvement. In this paper, we propose a gradient-based optimization method named LeapAttack to craft high-quality text adversarial examples in the hard-label setting. To specify, LeapAttack employs the word embedding space to characterize the semantic deviation between the two words of each perturbed substitution by their difference vector. Facilitated by this expression, LeapAttack gradually updates the perturbation direction and constructs adversarial examples in an iterative round trip: firstly, the gradient is estimated by transforming randomly sampled word candidates to continuous difference vectors after moving the current adversarial example near the decision boundary; secondly, the estimated gradient is mapped back to a new substitution word based on the cosine similarity metric. Extensive experimental results show that in the general case LeapAttack can efficiently generate high-quality text adversarial examples with the highest semantic similarity and the lowest perturbation rate in the hard-label setting. Muchao Ye, Chenglin Miao, Ting Wang 0006, Fenglong Ma |
KDD | 5 |
| 2022 | Towards Federated COVID-19 Vaccine Side Effect Prediction
Jiaqi Wang 0002, Cheng Qian 0001, Suhan Cui, Lucas Glass, Fenglong Ma |
ECML/PKDD (6) | 5 |
| 2022 | Textbook Enhanced Student Learning Outcome PredictionabstractOnline learning platforms that can recommend tailored materials for different students have become increasingly popular recently. To enable personalized learning, it is critical and essential to automatically estimate the mastery levels of students, which motivates a new task in the education field, i.e., the student learning outcome prediction. Although several models have been proposed, most of them ignore the relations between questions and knowledge concepts. However, manually labeling the relations among questions only by experts is inefficient and impractical, due to the large volume of questions in the online learning platforms. Thus, an automatic inference of such relations is needed. In addition, different students may use different concepts when answering the same question, which makes the inferred relation between a question and concepts differ among students. To address these challenges, we propose to leverage information from a textbook to link questions with knowledge concepts that a student may retrieve. Correspondingly, we propose a novel framework named TESLOP, which can effectively utilize both textual and structural information in the textbook for student learning outcome prediction. The model simulates the process of a student picking an answer by recalling the knowledge obtained from the textbook and utilizing the knowledge to pick a correct answer. Experimental results show that the proposed TESLOP framework outperforms state-of-the-art baselines, which confirms the importance of leveraging textbook information in the student learning outcome prediction task. It also demonstrates that the proposed way of integrating such information is effective. Fenglong Ma, Jing Gao 0004 |
SDM | 2 |
| 2022 | Price DOES Matter!: Modeling Price and Interest Preferences in Session-based RecommendationabstractSession-based recommendation aims to predict items that an anonymous user would like to purchase based on her short behavior sequence. The current approaches towards session-based recommendation only focus on modeling users' interest preferences, while they all ignore a key attribute of an item, i.e., the price. Many marketing studies have shown that the price factor significantly influences users' behaviors and the purchase decisions of users are determined by both price and interest preferences simultaneously. However, it is nontrivial to incorporate price preferences for session-based recommendation. Firstly, it is hard to handle heterogeneous information from various features of items to capture users' price preferences. Secondly, it is difficult to model the complex relations between price and interest preferences in determining user choices. Xiaokun Zhang 0001, Bo Xu 0009, Liang Yang 0003, Chenliang Li 0005, Fenglong Ma, Haifeng Liu 0002, Hongfei Lin |
SIGIR | 5 |
| 2022 | Dynamic intent-aware iterative denoising network for session-based recommendation
Xiaokun Zhang 0001, Hongfei Lin, Bo Xu 0009, Chenliang Li 0005, Yuan Lin 0001, Haifeng Liu 0002, Fenglong Ma |
Inf. Process. Manag. | 7 |
| 2021 | FedTriNet: A Pseudo Labeling Method with Three Players for Federated Semi-supervised LearningabstractFederated Learning has shown great potentials for the distributed data utilization and privacy protection. Most existing federated learning approaches focus on the supervised setting, which means all the data stored in each client has labels. However, in real-world applications, the client data are impossible to be fully labeled. Thus, how to exploit the unlabeled data should be a new challenge for federated learning. Although a few studies are attempting to overcome this challenge, they may suffer from information leakage or misleading information usage problems. To tackle these issues, in this paper, we propose a novel federated semi-supervised learning method named FedTriNet, which consists of two learning phases. In the first phase, we pre-train FedTriNet using labeled data with FedAvg. In the second phase, we aim to make most of the unlabeled data to help model learning. In particular, we propose to use three networks and a dynamic quality control mechanism to generate high-quality pseudo labels for unlabeled data, which are added to the training set. Finally, FedTriNet uses the new training set to retrain the model. Experimental results on three publicly available datasets show that the proposed FedTriNet outperforms state-of-the-art baselines under both IID and Non-IID settings. Liwei Che, Zewei Long, Jiaqi Wang 0002, Yaqing Wang 0001, Houping Xiao, Fenglong Ma |
IEEE BigData | 6 |
| 2021 | MedRetriever: Target-Driven Interpretable Health Risk Prediction via Retrieving Unstructured Medical TextabstractThe broad adoption of electronic health record (EHR) systems and the advances of deep learning technology have motivated the development of health risk prediction models, which mainly depend on the expressiveness and temporal modeling capacity of deep neural networks (DNNs) to improve prediction performance. Some further augment the prediction by using external knowledge, however, a great deal of EHR information inevitably loses during the knowledge mapping. In addition, prediction made by existing models usually lacks reliable interpretation, which undermines their reliability in guiding clinical decision-making. To solve these challenges, we propose MedRetriever, an effective and flexible framework that leverages unstructured medical text collected from authoritative websites to augment health risk prediction as well as to provide understandable interpretation. Besides, MedRetriever explicitly takes the target disease documents into consideration, which provide key guidance for the model to learn in a target-driven direction, i.e., from the target disease to the input EHR. To specify, MedRetriever can flexibly choose its backbone from major predictive models to learn the EHR embedding for each visit. After that, the EHR embedding and features of target disease documents are aggregated into a query by self-attention to retrieve highly relevant text segments from the medical text pool, which is stored in the dynamically updated text memory. Finally, the comprehensive EHR embedding and the text memory are used for prediction and interpretation. We evaluate MedRetriever against nine state-of-the-art approaches across three real-world EHR datasets, which consistently achieves the best performance in AUC and recall metrics and outperforms the best baseline by at least 4.8% in recall on three test datasets. Furthermore, we conduct case studies to show the easy-to-understand interpretation by MedRetriever. Muchao Ye, Suhan Cui, Yaqing Wang 0001, Junyu Luo 0001, Cao Xiao, Fenglong Ma |
CIKM | 6 |
| 2021 | Advances in Mining Heterogeneous Healthcare DataabstractThanks to the explosion of heterogeneous healthcare data and advanced machine learning and data mining techniques, specifically deep learning methods, we now have an opportunity to make difference in healthcare. In this tutorial, we will present state-of-the-art deep learning methods and their real-world applications, specifically focusing on exploring the unique characteristics of different types of healthcare data. The first half will be spent on introducing recent advances in mining structured healthcare data, including computational phenotyping, disease early detection/risk prediction and treatment recommendation. In the second half, we will focus on challenges specific to the unstructured healthcare data, and introduce advanced deep learning methods in automated ICD coding, understandable medical language translation, clinical trial mining, and medical report generation. This tutorial is intended for students, engineers and researchers who are interested in applying deep learning methods to healthcare, and prerequisite knowledge will be minimal. The tutorial will be concluded with open problems and a Q&A session. Fenglong Ma, Muchao Ye, Junyu Luo 0001, Cao Xiao, Jimeng Sun 0001 |
KDD | 1 |
| 2021 | Multimodal Emergent Fake News Detection via Meta Neural Process NetworksabstractFake news travels at unprecedented speeds, reaches global audiences and puts users and communities at great risk via social media platforms. Deep learning based models show good performance when trained on large amounts of labeled data on events of interest, whereas the performance of models tends to degrade on other events due to domain shift. Therefore, significant challenges are posed for existing detection approaches to detect fake news on emergent events, where large-scale labeled datasets are difficult to obtain. Moreover, adding the knowledge from newly emergent events requires to build a new model from scratch or continue to fine-tune the model, which can be challenging, expensive, and unrealistic for real-world settings. In order to address those challenges, we propose an end-to-end fake news detection framework named MetaFEND, which is able to learn quickly to detect fake news on emergent events with a few verified posts. Specifically, the proposed model integrates meta-learning and neural process methods together to enjoy the benefits of these approaches. In particular, a label embedding module and a hard attention mechanism are proposed to enhance the effectiveness by handling categorical information and trimming irrelevant posts. Extensive experiments are conducted on multimedia datasets collected from Twitter and Weibo. The experimental results show our proposed MetaFEND model can detect fake news on never-seen events effectively and outperform the state-of-the-art methods. Yaqing Wang 0001, Fenglong Ma, Haoyu Wang 0004, Kishlay Jha, Jing Gao 0004 |
KDD | 2 |
| 2021 | ConCAD: Contrastive Learning-Based Cross Attention for Sleep Apnea Detection
Guanjie Huang, Fenglong Ma |
ECML/PKDD (5) | 2 |
| 2021 | Towards Learning Outcome Prediction via Modeling Question Explanations and Student ResponsesabstractPredicting the current learning outcome of a student based on his/her responses to previous questions is a vital task for personalized education.Deep learning based models have achieved satisfactory performance on this task as they can automatically extract meaningful signals related to student learning outcome predictions.However, these models are unable to leverage the following critical pieces of information.First, the correct choice to a question is often accompanied by a textual explanation on why this choice is correct.This explanation text contains valuable informa- Fenglong Ma, Yaqing Wang 0001, Jing Gao 0004 |
SDM | 2 |
| 2021 | UNITE: Uncertainty-based Health Risk Prediction Leveraging Multi-sourced DataabstractSuccessful health risk prediction demands accuracy and reliability of the model. Existing predictive models mainly depend on mining electronic health records (EHR) with advanced deep learning techniques to improve model accuracy. However, they all ignore the importance of publicly available online health data, especially socioeconomic status, environmental factors, and detailed demographic information for each location, which are all strong predictive signals and can definitely augment precision medicine. To achieve model reliability, the model needs to provide accurate prediction and uncertainty score of the prediction. However, existing uncertainty estimation approaches often failed in handling high-dimensional data, which are present in multi-sourced data. Chacha Chen, Fenglong Ma, Lucas Glass, Jimeng Sun 0001, Cao Xiao |
WWW | 3 |
| 2021 | MedPath: Augmenting Health Risk Prediction via Medical Knowledge PathsabstractThe broad adoption of electronic health records (EHR) data and the availability of biomedical knowledge graphs (KGs) on the web have provided clinicians and researchers unprecedented resources and opportunities for conducting health risk predictions to improve healthcare quality and medical resource allocation. Existing methods have focused on improving the EHR feature representations using attention mechanisms, time-aware models, or external knowledge. However, they ignore the importance of using personalized information to make predictions. Besides, the reliability of their prediction interpretations needs to be improved since their interpretable attention scores are not explicitly reasoned from disease progression paths. In this paper, we propose MedPath to solve these challenges and augment existing risk prediction models with the ability to use personalized information and provide reliable interpretations inferring from disease progression paths. Firstly, MedPath extracts personalized knowledge graphs (PKGs) containing all possible disease progression paths from observed symptoms to target diseases from a large-scale online medical knowledge graph. Next, to augment existing EHR encoders for achieving better predictions, MedPath learns a PKG embedding by conducting multi-hop message passing from symptom nodes to target disease nodes through a graph neural network encoder. Since MedPath reasons disease progression by paths existing in PKGs, it can provide explicit explanations for the prediction by pointing out how observed symptoms can finally lead to target diseases. Experimental results on three real-world medical datasets show that MedPath is effective in improving the performance of eight state-of-the-art methods with higher F1 scores and AUCs. Our case study also demonstrates that MedPath can greatly improve the explicitness of the risk prediction interpretation.1 Muchao Ye, Suhan Cui, Yaqing Wang 0001, Junyu Luo 0001, Cao Xiao, Fenglong Ma |
WWW | 6 |
| 2020 | Efficient Knowledge Graph Validation via Cross-Graph Representation LearningabstractRecent advances in information extraction have motivated the automatic construction of huge Knowledge Graphs (KGs) by mining from large-scale text corpus. However, noisy facts are unavoidably introduced into KGs that could be caused by automatic extraction. Yaqing Wang 0001, Fenglong Ma, Jing Gao 0004 |
CIKM | 2 |
| 2020 | LSAN: Modeling Long-term Dependencies and Short-term Correlations with Hierarchical Attention for Risk PredictionabstractRisk prediction using electronic health records (EHR) is a challenging data mining task due to the two-level hierarchical structure of EHR data. EHR data consist of a set of time-ordered visits, and within each visit, there is a set of unordered diagnosis codes. Existing approaches focus on modeling temporal visits with deep neural network (DNN) techniques. However, they ignore the importance of modeling diagnosis codes within visits, and a lot of task-unrelated information within visits usually leads to unsatisfactory performance of existing approaches. To minimize the effect caused by noise information of EHR data, in this paper, we propose a novel DNN for risk prediction termed as LSAN, which consists of a Hierarchical Attention Module (HAM) and a Temporal Aggregation Module (TAM). Particularly, LSAN applies HAM to model the hierarchical structure of EHR data. Using the attention mechanism in the hierarchy of diagnosis code, HAM is able to retain diagnosis details and assign flexible attention weights to different diagnosis codes by their relevance to corresponding diseases. Moreover, the attention mechanism in the hierarchy of visit learns a comprehensive feature throughout the visit history by paying greater attention to visits with higher relevance. Based on the foundation laying by HAM, TAM uses a two-pathway structure to learn a robust temporal aggregation mechanism among all visits for LSAN. It extracts long-term dependencies by a Transformer encoder and short-term correlations by a parallel convolutional layer among different visits. With the construction of HAM and TAM, LSAN achieves the state-of-the-art performance on three real-world datasets with larger AUCs, recalls and F1 scores. Furthermore, the model analysis results demonstrate the effectiveness of the network construction with good interpretability and robustness of decision making by LSAN. Muchao Ye, Junyu Luo 0001, Cao Xiao, Fenglong Ma |
CIKM | 4 |
| 2020 | LP-Explain: Local Pictorial Explanation for OutliersabstractOutlier detection is of vital importance for various fields and applications. Existing works mainly focus on identifying outliers from underlying datasets, while how to provide sense-making explanations is largely ignored. In this paper, we propose to visualize data points in a set of scatter plots on two-dimensional (2-D) feature spaces that can provide meaningful explanations about the outlying behavior of outliers. Data are typically multidimensional and the number of 2-D combinations could be huge. Also, outliers may have diverse characteristics, and thus the global scatter plots containing all of outliers may degrade the explanation effectiveness for those outliers having idiosyncratic abnormal 2-D spaces. To address this problem, we propose a new outlier explanation approach, called LP-Explain, which tries to identify the set of best Local Pictorial explanations (defined as the scatter plots in the 2-D space of the feature pairs) that can Explain the behavior for cluster of outliers. We first define an effective measure to quantify the similarity between outliers, and then cluster outliers into different groups based on their abnormal feature pairs. We then propose to weigh the importance of feature pairs within each cluster through a multi-task learning framework to select the set of top feature pairs that best explain various outlier clusters. By adjusting a user-defined parameter indicating the “localization level”, the proposed method can attain both global and local results for the explanation of the outliers. 2-D visual explanations can be plotted for the top-weighted feature pairs of each cluster. We conduct experiments on various public datasets, which show that the proposed approach can provide more meaningful explanations about the outlying behavior in a dataset. Haoyu Liu 0002, Fenglong Ma, Yaqing Wang 0001, Shibo He, Jiming Chen 0001, Jing Gao 0004 |
ICDM | 2 |
| 2020 | DETERRENT: Knowledge Guided Graph Attention Network for Detecting Healthcare MisinformationabstractTo provide accurate and explainable misinformation detection, it is often useful to take an auxiliary source (e.g., social context and knowledge base) into consideration. Existing methods use social contexts such as users' engagements as complementary information to improve detection performance and derive explanations. However, due to the lack of sufficient professional knowledge, users seldom respond to healthcare information, which makes these methods less applicable. In this work, to address these shortcomings, we propose a novel knowledge guided graph attention network for detecting health misinformation better. Our proposal, named as DETERRENT, leverages on the additional information from medical knowledge graph by propagating information along with the network, incorporates a Medical Knowledge Graph and an Article-Entity Bipartite Graph, and propagates the node embeddings through Knowledge Paths. In addition, an attention mechanism is applied to calculate the importance of entities to each article, and the knowledge guided article embeddings are used for misinformation detection. DETERRENT addresses the limitation on social contexts in the healthcare domain and is capable of providing useful explanations for the results of detection. Empirical validation using two real-world datasets demonstrated the effectiveness of DETERRENT. Comparing with the best results of eight competing methods, in terms of F1 Score, DETERRENT outperforms all methods by at least 4.78% on the diabetes dataset and 12.79% on cancer dataset. We release the source code of DETERRENT at: https://github.com/cuilimeng/DETERRENT. Limeng Cui, Haeseung Seo, Maryam Tabar, Fenglong Ma, Suhang Wang, Dongwon Lee 0001 |
KDD | 4 |
| 2020 | HiTANet: Hierarchical Time-Aware Attention Networks for Risk Prediction on Electronic Health RecordsabstractDeep learning methods especially recurrent neural network based models have demonstrated early success in disease risk prediction on longitudinal patient data. Existing works follow a strong assumption to implicitly assume the stationary disease progression during each time period, and thus, take a homogeneous way to decay the information from previous time steps for all patients. However,in reality, disease progression is non-stationary. Besides, the key time steps for a target disease vary among patients. To leverage time information for risk prediction in a more reasonable way, we propose a new hierarchical time-aware attention network, named HiTANet, which imitates the decision making process of doctors inrisk prediction. Particularly, HiTANet models time information in local and global stages. The local evaluation stage has a time aware Transformer that embeds time information into visit-level embed-ding and generates local attention weight for each visit. The global synthesis stage further adopts a time-aware key-query attention mechanism to assign global weights to different time steps. Finally, the two types of attention weights are dynamically combined to generate the patient representations for further risk prediction. We evaluate HiTANet on three real-world datasets. Compared with the best results among twelve competing baselines, HiTANet achieves over 7% in terms of F1 score on all datasets, which demonstrates the effectiveness of the proposed model and the necessity of modeling time information in risk prediction task. Junyu Luo 0001, Muchao Ye, Cao Xiao, Fenglong Ma |
KDD | 4 |
| 2020 | Attackability Characterization of Adversarial Evasion Attack on Discrete DataabstractEvasion attack on discrete data is a challenging, while practically interesting research topic. It is intrinsically an NP-hard combinatorial optimization problem. Characterizing the conditions guaranteeing the solvability of an evasion attack task thus becomes the key to understand the adversarial threat. Our study is inspired by the weak submodularity theory. We characterize the attackability of a targeted classifier on discrete data in evasion attack by bridging the attackability measurement and the regularity of the targeted classifier. Based on our attackability analysis, we propose a computationally efficient orthogonal matching pursuit-guided attack method for evasion attack on discrete data. It provides provably computational efficiency and attack performances. Substantial experimental results on real-world datasets validate the proposed attackability conditions and the effectiveness of the proposed attack method. Yufei Han 0001, Hongyan Bao, Fenglong Ma, Jin Li 0002, Xiangliang Zhang 0001 |
KDD | 5 |
| 2020 | Rare Disease Prediction by Generating Quality-Assured Electronic Health RecordsabstractPredicting diseases for patients is an important and practical task in healthcare informatics. Existing disease prediction models focus on common diseases, i.e., there are enough available EHR data and prior medical knowledge for analyzing them. However, those models may not work for rare disease prediction as it is extremely hard to collect enough EHR data with such diseases. To tackle these issues, in this paper, we design a novel rare disease prediction system, which not only generates EHR data but also automatically selects high-quality generated data to further improve the predictive performance. Three components are designed in the system: data generation, data selection, and prediction. In particular, we propose MaskEHR to generate diverse EHR data based on the data from patients suffering from the given diseases. To remove noise information in the generated EHR data, we further design a reinforcement learning-based data selector, called RL-Selector, which can automatically choose the high-quality generated EHR data. Finally, the prediction component is used to identify patients who will potentially suffer the given diseases. These three components work together and enhance each other. Experiments on three real healthcare datasets show that the proposed system outperforms existing approaches on rare disease prediction task. Fenglong Ma, Yaqing Wang 0001, Jing Gao 0004, Houping Xiao |
SDM | 1 |
| 2020 | Learning with Small DataabstractIn the era of big data, it is easy for us collect a huge number of image and text data. However, we frequently face the real-world problems with only small (labeled) data in some domains, such as healthcare and urban computing. The challenge is how to make machine learn algorithms still work well with small data? To solve this challenge, in this tutorial, we will cover the state-of-the-art machine learning techniques to handle small data issue. In particular, we focus on the following three aspects: (1) Providing a comprehensive review of recent advances in exploring the power of knowledge transfer, especially focusing on meta-learning; (2) introducing the cutting-edge techniques of incorporating human/expert knowledge into machine learning models; and (3) identifying the open challenges to data augmentation techniques, such as generative adversarial networks. We believe this is an emerging and potentially high-impact topic in computational data science, which will attract both researchers and practitioners from academia and industry. Zhenhui Li, Huaxiu Yao, Fenglong Ma |
WSDM | 3 |
| 2019 | Online Federated Multitask LearningabstractWith the popular use of mobile devices, it becomes increasingly important to conduct analysis on distributed data collected from multiple devices. Federated learning is a distributed learning framework which takes advantage of the training data and computational ability of scattered mobile devices to learn prediction models, and multi-task learning infers personalized but shared models among devices. Some recent work has integrated federated and multi-task learning, but such approaches may be impractical and inefficient in the online scenario, e.g., when new mobile devices keep joining the mobile computing system. To address this challenge, we propose OFMTL, an online federated multi-task learning algorithm, which learns the model parameters for the new device without revisiting the data of existing devices. The model parameters are derived by an effective way that combines the information inferred from local data and information borrowed from existing models. Through extensive experiments on three real datasets, we show that the proposed OFMTL framework achieves comparable accuracy to the existing algorithms but with much smaller computation, transmission and storage cost. Fenglong Ma, Jing Gao 0004 |
IEEE BigData | 2 |
| 2019 | IProWA: A Novel Probabilistic Graphical Model for Crowdsourcing AggregationabstractCrowdsourcing has become a popular way to obtain a large volume of labeled data due to its low cost and high efficiency. Usually the crowdsourcing process enables redundancy in the collected labels in order to ensure the correctness of item labels. However, workers on the crowdsourcing platform may make mistakes on some items, leading to inconsistent labels. In this case, it is important to aggregate these noisy labels and obtain the true labels of the items. The correctness of the item label provided by a worker depends on both the worker's ability and the property of the item. However, most of the existing models consider the effect of workers' abilities but ignore that of the item properties. In this paper, we propose a novel crowdsourcing aggregation method (IProWA) which incorporates the modeling of not only worker expertise level but also item property. In particular, items are represented by a K dimensional vector (i.e., item parameter), where K is the number of possible categories and each dimension represents a category. The proposed model transforms the true label estimation into the estimation of item parameters as it connects the true label and the parameters of an item. In worker modeling, it models the different category propensities among different worker groups. Experimental results show that the performance of the proposed model is comparable to that of the state-of-the-art baselines and the learned item parameters can help interpret the property of that item. Houping Xiao, Fenglong Ma, Jing Gao 0004 |
IEEE BigData | 3 |
| 2019 | Optimizing the Wisdom of the Crowd: Inference, Learning, and TeachingabstractThe increasing need for labeled data has brought the booming growth of crowdsourcing in a wide range of high-impact real-world applications, such as collaborative knowledge (e.g., data annotations, language translations), collective creativity (e.g., analogy mining, crowdfunding), and reverse Turing test (e.g., CAPTCHA-like systems), etc. In the context of supervised learning, crowdsourcing refers to the annotation procedure where the data items are outsourced and processed by a group of mostly unskilled online workers. Thus, the researchers or the organizations are able to collect large amount of information via the feedback of the crowd in a short time with a low cost. Yao Zhou 0003, Fenglong Ma, Jing Gao 0004, Jingrui He |
KDD | 2 |
| 2019 | MCVAE: Margin-based Conditional Variational Autoencoder for Relation Classification and Pattern GenerationabstractRelation classification is a basic yet important task in natural language processing. Existing relation classification approaches mainly rely on distant supervision, which assumes that a bag of sentences mentioning a pair of entities and extracted from a given corpus should express the same relation type of this entity pair. The training of these models needs a lot of high-quality bag-level data. However, in some specific domains, such as medical domain, it is difficult to obtain sufficient and high-quality sentences in a text corpus that mention two entities with a certain medical relation between them. In such a case, it is hard for existing discriminative models to capture the representative features (i.e., common patterns) from diversely expressed entity pairs with a given relation. Thus, the classification performance cannot be guaranteed when limited features are obtained from the corpus. To address this challenge, in this paper, we propose to employ a generative model, called conditional variational autoencoder (CVAE), to handle the pattern sparsity. We define that each relation has an individually learned latent distribution from all possible sentences expressing this relation. As these distributions are learned based on the purpose of input reconstruction, the model's classification ability may not be strong enough and should be improved. By distinguishing the differences among different relation distributions, a margin-based regularizer is designed, which leads to a margin-based CVAE (MCVAE) that can significantly enhance the classification ability. Besides, MCVAE can automatically generate semantically meaningful patterns that describe the given relations. Experiments on two real-world datasets validate the effectiveness of the proposed MCVAE on the tasks of relation classification and relation-specific pattern generation. Fenglong Ma, Yaliang Li, Jing Gao 0004, Nan Du 0001, Wei Fan 0001 |
WWW | 1 |
| 2019 | Towards Confidence Interval Estimation in Truth DiscoveryabstractThe demand for automatic extraction of true information (i.e., truths) from conflicting multi-source data has soared recently. A variety of truth discovery methods have witnessed great successes via jointly estimating source reliability and truths. All existing truth discovery methods focus on providing a point estimator for each object's truth, but in many real-world applications, confidence interval estimation of truths is more desirable, since confidence interval contains richer information. To address this challenge, in this paper, we propose a novel truth discovery method (ETCIBoot) to construct confidence interval estimates as well as identify truths, where the bootstrapping techniques are nicely integrated into the truth discovery procedure. Due to the properties of bootstrapping, the estimators obtained by ETCIBoot are more accurate and robust compared with the state-of-the-art truth discovery approaches. The proposed framework is further adapted to deal with large-scale truth discovery task in distributed paradigm. Theoretically, we prove the asymptotical consistency of the confidence interval obtained by ETCIBoot. Experimentally, we demonstrate that ETCIBoot is not only effective in constructing confidence intervals but also able to obtain better truth estimates. Houping Xiao, Jing Gao 0004, Qi Li 0012, Fenglong Ma, Lu Su 0001, Yunlong Feng, Aidong Zhang 0001 |
IEEE Trans. Knowl. Data Eng. | 4 |
| 2018 | Leveraging the Power of Informative Users for Local Event DetectionabstractDetecting local events (e.g., protests, accidents) in real-time is an important task needed by a wide spectrum of real-world applications. In recent years, with the proliferation of social media platforms, we can access massive geo- tagged social messages, which can serve as a precious resource for timely local event detection. However, existing local event detection methods either suffer from unsatisfactory performances or need intensive annotations. These limitations make existing methods impractical for large-scale applications. Through the analysis of real-world datasets, we found that the informativeness level of social media users, which is neglected by existing work, plays a highly critical role in distilling event-related information from noisy social media contexts. Motivated by this finding, we propose an unsupervised framework, named LEDetect, to estimate the informativeness level of social media users and leverage the power of highly informative users for local event detection. Experiments on a large-scale real-world dataset show that the proposed LEDetect model can improve the performance of event detection compared with the state-of-the-art unsupervised approach. Also, we use case studies to show that the events discovered by the proposed model are of high quality and the extracted highly informative users are reasonable. Hengtong Zhang, Fenglong Ma, Yaliang Li, Chao Zhang 0014, Yaqing Wang 0001, Jing Gao 0004, Lu Su 0001 |
ASONAM | 2 |
| 2018 | KAME: Knowledge-based Attention Model for Diagnosis Prediction in HealthcareabstractThe goal of diagnosis prediction task is to predict the future health information of patients from their historical Electronic Healthcare Records (EHR). The most important and challenging problem of diagnosis prediction is to design an accurate, robust and interpretable predictive model. Existing work solves this problem by employing recurrent neural networks (RNNs) with attention mechanisms, but these approaches suffer from the data sufficiency problem. To obtain good performance with insufficient data, graph-based attention models are proposed. However, when the training data are sufficient, they do not offer any improvement in performance compared with ordinary attention-based models. To address these issues, we propose KAME, an end-to-end, accurate and robust model for predicting patients' future health information. KAME not only learns reasonable embeddings for nodes in the knowledge graph, but also exploits general knowledge to improve the prediction accuracy with the proposed knowledge attention mechanism. With the learned attention weights, KAME allows us to interpret the importance of each piece of knowledge in the graph. Experimental results on three real world datasets show that the proposed KAME significantly improves the prediction performance compared with the state-of-the-art approaches, guarantees the robustness with both sufficient and insufficient data, and learns interpretable disease representations. Fenglong Ma, Quanzeng You, Houping Xiao, Radha Chitta, Jing Gao 0004 |
CIKM | 1 |
| 2018 | Multi-task Sparse Metric Learning for Monitoring Patient Similarity ProgressionabstractA clinically meaningful distance metric, which is learned from measuring patient similarity, plays an important role in clinical decision support applications. Several metric learning approaches have been proposed to measure patient similarity, but they are mostly designed for learning the metric at only one time point/interval. It leads to a problem that those approaches cannot reflect the similarity variations among patients with the progression of diseases. In order to capture similarity information from multiple future time points simultaneously, we formulate a multi-task metric learning approach to identify patient similarity. However, it is challenging to directly apply traditional multi-task metric learning methods to learn such similarities due to the high dimensional, complex and noisy nature of healthcare data. Besides, the disease labels often have clinical relationships, which should not be treated as independent. Unfortunately, traditional formulation of the loss function ignores the degree of labels' similarity. To tackle the aforementioned challenges, we propose mtTSML, a multi-task triplet constrained sparse metric learning method, to monitor the similarity progression of patient pairs. In the proposed model, the distance for each task can be regarded as the combination of a common part and a task-specific one in the transformed low-rank space. We then perform sparse feature selection for each individual task to select the most discriminative information. Moreover, we use triplet constraints to guarantee the margin between similar and less similar pairs according to the ordered information of disease severity levels (i.e. labels). The experimental results on two real-world healthcare datasets show that the proposed multi-task metric learning method significantly outperforms the state-of-the-art baselines, including both single-task and multi-task metric learning methods. Qiuling Suo, Weida Zhong, Fenglong Ma, Ye Yuan 0006, Mengdi Huai, Aidong Zhang 0001 |
ICDM | 3 |
| 2018 | eOTD: An Efficient Online Tucker Decomposition for Higher Order TensorsabstractA tensor (i.e., an N-mode array) is a natural representation for multidimensional data. Tucker Decomposition (TD) is one of the most popular methods, and a series of batch TD algorithms have been extensively studied and widely applied in signal/image processing, bioinformatics, etc. However, in many applications, the large-scale tensor is dynamically evolving at all modes, which poses significant challenges for existing approaches to track the TD for such dynamic tensors. In this paper, we propose an efficient Online Tucker Decomposition (eOTD) approach to track the TD of dynamic tensors with an arbitrary number of modes. We first propose corollaries on the multiplication of block tensor matrix. Based on this corollary, eOTD allows us 1) to update the projection matrices using those projection matrices from the previous timestamp and the auxiliary matrices from the current timestamp, and 2) to update the core tensor by a sum of tensors that are obtained by multiplying smaller tensors with matrices. The auxiliary matrices are obtained by solving a series of least square regression tasks, not by performing Singular Value Decompositions (SVD). This overcomes the bottleneck in computation and storage caused by computing SVDs on largescale data. A Modified Gram-Schmidt (MGS) process is further applied to orthonormalize the projection matrices. Theoretically, the output of the eOTD framework is guaranteed to be lowrank. We further prove that the MGS process will not increase Tucker decomposition error. Empirically, we demonstrate that the proposed eOTD achieves comparable accuracy with a significant speedup on both synthetic and real data, where the speedup can be more than 1,500 times on large-scale data. Houping Xiao, Fenglong Ma, Jing Gao 0004 |
ICDM | 3 |
| 2018 | MuVAN: A Multi-view Attention Network for Multivariate Temporal DataabstractRecent advances in attention networks have gained enormous interest in time series data mining. Various attention mechanisms are proposed to soft-select relevant timestamps from temporal data by assigning learnable attention scores. However, many real-world tasks involve complex multivariate time series that continuously measure target from multiple views. Different views may provide information of different levels of quality varied over time, and thus should be assigned with different attention scores as well. Unfortunately, the existing attention-based architectures cannot be directly used to jointly learn the attention scores in both time and view domains, due to the data structure complexity. Towards this end, we propose a novel multi-view attention network, namely MuVAN, to learn fine-grained attentional representations from multivariate temporal data. MuVAN is a unified deep learning model that can jointly calculate the two-dimensional attention scores to estimate the quality of information contributed by each view within different timestamps. By constructing a hybrid focus procedure, we are able to bring more diversity to attention, in order to fully utilize the multi-view information. To evaluate the performance of our model, we carry out experiments on three real-world benchmark datasets. Experimental results show that the proposed MuVAN model outperforms the state-of-the-art deep representation approaches in different real-world tasks. Analytical results through a case study demonstrate that MuVAN can discover discriminative and meaningful attention scores across views over time, which improves the feature representation of multivariate temporal data. Ye Yuan 0006, Guangxu Xun, Fenglong Ma, Yaqing Wang 0001, Nan Du 0001, Kebin Jia, Lu Su 0001, Aidong Zhang 0001 |
ICDM | 3 |
| 2018 | Risk Prediction on Electronic Health Records with Prior Medical KnowledgeabstractPredicting the risk of potential diseases from Electronic Health Records (EHR) has attracted considerable attention in recent years, especially with the development of deep learning techniques. Compared with traditional machine learning models, deep learning based approaches achieve superior performance on risk prediction task. However, none of existing work explicitly takes prior medical knowledge (such as the relationships between diseases and corresponding risk factors) into account. In medical domain, knowledge is usually represented by discrete and arbitrary rules. Thus, how to integrate such medical rules into existing risk prediction models to improve the performance is a challenge. To tackle this challenge, we propose a novel and general framework called PRIME for risk prediction task, which can successfully incorporate discrete prior medical knowledge into all of the state-of-the-art predictive models using posterior regularization technique. Different from traditional posterior regularization, we do not need to manually set a bound for each piece of prior medical knowledge when modeling desired distribution of the target disease on patients. Moreover, the proposed PRIME can automatically learn the importance of different prior knowledge with a log-linear model.Experimental results on three real medical datasets demonstrate the effectiveness of the proposed framework for the task of risk prediction Fenglong Ma, Jing Gao 0004, Qiuling Suo, Quanzeng You, Aidong Zhang 0001 |
KDD | 1 |
| 2018 | EANN: Event Adversarial Neural Networks for Multi-Modal Fake News DetectionabstractAs news reading on social media becomes more and more popular, fake news becomes a major issue concerning the public and government. The fake news can take advantage of multimedia content to mislead readers and get dissemination, which can cause negative effects or even manipulate the public events. One of the unique challenges for fake news detection on social media is how to identify fake news on newly emerged events. Unfortunately, most of the existing approaches can hardly handle this challenge, since they tend to learn event-specific features that can not be transferred to unseen events. In order to address this issue, we propose an end-to-end framework named Event Adversarial Neural Network (EANN), which can derive event-invariant features and thus benefit the detection of fake news on newly arrived events. It consists of three main components: the multi-modal feature extractor, the fake news detector, and the event discriminator. The multi-modal feature extractor is responsible for extracting the textual and visual features from posts. It cooperates with the fake news detector to learn the discriminable representation for the detection of fake news. The role of event discriminator is to remove the event-specific features and keep shared features among events. Extensive experiments are conducted on multimedia datasets collected from Weibo and Twitter. The experimental results show our proposed EANN model can outperform the state-of-the-art methods, and learn transferable feature representations. Yaqing Wang 0001, Fenglong Ma, Zhiwei Jin, Ye Yuan 0006, Guangxu Xun, Kishlay Jha, Lu Su 0001, Jing Gao 0004 |
KDD | 2 |
| 2018 | TextTruth: An Unsupervised Approach to Discover Trustworthy Information from Multi-Sourced Text DataabstractTruth discovery has attracted increasingly more attention due to its ability to distill trustworthy information from noisy multi-sourced data without any supervision. However, most existing truth discovery methods are designed for structured data, and cannot meet the strong need to extract trustworthy information from raw text data as text data has its unique characteristics. The major challenges of inferring true information on text data stem from the multifactorial property of text answers (i.e., an answer may contain multiple key factors) and the diversity of word usages (i.e., different words may have the same semantic meaning). To tackle these challenges, in this paper, we propose a novel truth discovery method, named "TextTruth", which jointly groups the keywords extracted from the answers of a specific question into multiple interpretable factors, and infers the trustworthiness of both answer factors and answer providers. After that, the answers to each question can be ranked based on the estimated trustworthiness of factors. The proposed method works in an unsupervised manner, and thus can be applied to various application scenarios that involve text data. Experiments on three real-world datasets show that the proposed TextTruth model can accurately select trustworthy answers, even when these answers are formed by multiple factors. Hengtong Zhang, Yaliang Li, Fenglong Ma, Jing Gao 0004, Lu Su 0001 |
KDD | 3 |
| 2018 | Online Truth Discovery on Time Series DataabstractTruth discovery, with the goal of inferring true information from massive data through aggregating the information from multiple data sources, has attracted significant attention in recent years. It has demonstrated great advantages in real applications since it can automatically learn the reliability degrees of the data sources without supervision and in turn helps to find more reliable information. In many applications, however, the data may arrive in a stream and present various temporal patterns. Unfortunately, there is no existing truth discovery work that can handle such time series data. To tackle this challenge, we propose a novel online truth discovery framework that incorporates the predictions on the time series data into the truth estimation process. By jointly considering the multi-source information and the temporal patterns of the time series data, the proposed framework can improve the accuracy of the truth discovery results as well as the time series prediction. The effectiveness of the proposed framework is validated on both synthetic and real-world datasets. Liuyi Yao, Lu Su 0001, Qi Li 0012, Yaliang Li, Fenglong Ma, Jing Gao 0004, Aidong Zhang 0001 |
SDM | 5 |
| 2017 | Discovering Truths from Distributed DataabstractIn the big data era, the information about the same object collected from multiple sources is inevitably conflicting. The task of identifying true information (i.e., the truths) among conflicting data is referred to as truth discovery, which incorporates the estimation of source reliability degrees into the aggregation of multi-source data. However, in many real-world applications, large-scale data are distributed across multiple servers. Traditional truth discovery approaches cannot handle this scenario due to the constraints of communication overhead and privacy concern. Another limitation of most existing work is that they ignore the differences among objects, i.e., they treat all the objects equally. This limitation would be exacerbated in distributed environments where significant differences exist among the objects. To tackle the aforementioned issues, in this paper, we propose a novel distributed truth discovery framework (DTD), which can effectively and efficiently aggregate conflicting data stored across distributed servers, with the differences among the objects as well as the importance level of each server being considered. The proposed framework consists of two steps: the local truth computation step conducted by each local server and the central truth estimation step taking place in the central server. Specifically, we introduce the uncertainty values to model the differences among objects, and propose a new uncertainty-based truth discovery method (UbTD) for calculating the true information of objects in each local server. The outputs of the local truth computation step include the estimated local truths and the variances of objects, which are the input information of the central truth estimation step. To infer the final true information in the central server, we propose a new algorithm to aggregate the outputs of all the local servers with the quality of different local servers taken into account. The proposed distributed truth discovery framework can infer object truths without delivering any raw data to the central server, and thus can reduce communication overhead as well as preserve data privacy. Experimental results on three real world datasets show that the proposed DTD framework can efficiently estimate object truths with accuracy guarantee, and the proposed UbTD algorithm significantly outperforms the state-of-the-art batch truth discovery approaches. Yaqing Wang 0001, Fenglong Ma, Lu Su 0001, Jing Gao 0004 |
ICDM | 2 |
| 2017 | Dipole: Diagnosis Prediction in Healthcare via Attention-based Bidirectional Recurrent Neural NetworksabstractPredicting the future health information of patients from the historical Electronic Health Records (EHR) is a core research task in the development of personalized healthcare. Patient EHR data consist of sequences of visits over time, where each visit contains multiple medical codes, including diagnosis, medication, and procedure codes. The most important challenges for this task are to model the temporality and high dimensionality of sequential EHR data and to interpret the prediction results. Existing work solves this problem by employing recurrent neural networks (RNNs) to model EHR data and utilizing simple attention mechanism to interpret the results. However, RNN-based approaches suffer from the problem that the performance of RNNs drops when the length of sequences is large, and the relationships between subsequent visits are ignored by current RNN-based approaches. To address these issues, we propose Dipole, an end-to-end, simple and robust model for predicting patients' future health information. Dipole employs bidirectional recurrent neural networks to remember all the information of both the past visits and the future visits, and it introduces three attention mechanisms to measure the relationships of different visits for the prediction. With the attention mechanisms, Dipole can interpret the prediction results effectively. Dipole also allows us to interpret the learned medical code representations which are confirmed positively by medical experts. Experimental results on two real world EHR datasets show that the proposed Dipole can significantly improve the prediction accuracy compared with the state-of-the-art diagnosis prediction approaches and provide clinically meaningful interpretation. Fenglong Ma, Radha Chitta, Quanzeng You, Tong Sun 0001, Jing Gao 0004 |
KDD | 1 |
| 2017 | Unsupervised Discovery of Drug Side-Effects from Heterogeneous Data SourcesabstractDrug side-effects become a worldwide public health concern, which are the fourth leading cause of death in the United States. Pharmaceutical industry has paid tremendous effort to identify drug side-effects during the drug development. However, it is impossible and impractical to identify all of them. Fortunately, drug side-effects can also be reported on heterogeneous platforms (i.e., data sources), such as FDA Adverse Event Reporting System and various online communities. However, existing supervised and semi-supervised approaches are not practical as annotating labels are expensive in the medical field. In this paper, we propose a novel and effective unsupervised model Sifter to automatically discover drug side-effects. Sifter enhances the estimation on drug side-effects by learning from various online platforms and measuring platform-level and user-level quality simultaneously. In this way, Sifter demonstrates better performance compared with existing approaches in terms of correctly identifying drug side-effects. Experimental results on five real-world datasets show that Sifter can significantly improve the performance of identifying side-effects compared with the state-of-the-art approaches. Fenglong Ma, Chuishi Meng, Houping Xiao, Qi Li 0012, Jing Gao 0004, Lu Su 0001, Aidong Zhang 0001 |
KDD | 1 |
| 2016 | Influence-Aware Truth DiscoveryabstractIn the age of big data, information for the same entity can be obtained from different sources, which is inevitably conflicting. Therefore, aggregation methods are needed to identify the trustworthy information from such conflicting data. Truth discovery, which improves the aggregation results by estimating source trustworthiness and discovering truths simultaneously, has become an emerging field. Most truth discovery methods assume that sources make their claims independently, which may not be true in practice. As a matter of fact, influences among sources are ubiquitous and the claims made by one source may be influenced by others. Although there is some work that considers source correlation, those methods are designed to handle categorical claims, which is not general enough to represent the complicated real world applications. To tackle these challenges in truth discovery, we propose an unsupervised probabilistic model named IATD. The model takes source correlations as prior for influence derivation. To model influences among sources, we introduce "claim trustworthiness", which fuses the trustworthiness of the source which provides the claim and the trustworthiness of its influencers. Besides, the proposed model can handle different data types using different distributions in the probabilistic model. Experiments on real-world datasets show that IATD model can improve the aggregation performance compared with the state-of-the-art truth discovery approaches. The properties of IATD model are further illustrated using simulated datasets. Hengtong Zhang, Qi Li 0012, Fenglong Ma, Houping Xiao, Yaliang Li, Jing Gao 0004, Lu Su 0001 |
CIKM | 3 |
| 2016 | Topic Discovery for Short Texts Using Word EmbeddingsabstractDiscovering topics in short texts, such as news titles and tweets, has become an important task for many content analysis applications. However, due to the lack of rich context information in short texts, the performance of conventional topic models on short texts is usually unsatisfying. In this paper, we propose a novel topic model for short text corpus using word embeddings. Continuous space word embeddings, which is proven effective at capturing regularities in language, is incorporated into our model to provide additional semantics. Thus we model each short document as a Gaussian topic over word embeddings in the vector space. In addition, considering that background words in a short text are usually not semantically related, we introduce a discrete background mode over word types to complement the continuous Gaussian topics. We evaluate our model on news titles from data sources like abcnews, showing that our model is able to extract more coherent topics from short texts compared with the baseline methods and learn better topic representation for each short document. Guangxu Xun, Vishrawas Gopalakrishnan, Fenglong Ma, Yaliang Li, Jing Gao 0004, Aidong Zhang 0001 |
ICDM | 3 |
| 2016 | Towards Confidence in the Truth: A Bootstrapping based Truth Discovery ApproachabstractThe demand for automatic extraction of true information (i.e., truths) from conflicting multi-source data has soared recently. A variety of truth discovery methods have witnessed great successes via jointly estimating source reliability and truths. All existing truth discovery methods focus on providing a point estimator for each object's truth, but in many real-world applications, confidence interval estimation of truths is more desirable, since confidence interval contains richer information. To address this challenge, in this paper, we propose a novel truth discovery method (ETCIBoot) to construct confidence interval estimates as well as identify truths, where the bootstrapping techniques are nicely integrated into the truth discovery procedure. Due to the properties of bootstrapping, the estimators obtained by ETCIBoot are more accurate and robust compared with the state-of-the-art truth discovery approaches. Theoretically, we prove the asymptotical consistency of the confidence interval obtained by ETCIBoot. Experimentally, we demonstrate that ETCIBoot is not only effective in constructing confidence intervals but also able to obtain better truth estimates. Houping Xiao, Jing Gao 0004, Qi Li 0012, Fenglong Ma, Lu Su 0001, Yunlong Feng, Aidong Zhang 0001 |
KDD | 4 |
| 2016 | Crowdsourcing High Quality Labels with a Tight BudgetabstractIn the past decade, commercial crowdsourcing platforms have revolutionized the ways of classifying and annotating data, especially for large datasets. Obtaining labels for a single instance can be inexpensive, but for large datasets, it is important to allocate budgets wisely. With limited budgets, requesters must trade-off between the quantity of labeled instances and the quality of the final results. Existing budget allocation methods can achieve good quantity but cannot guarantee high quality of individual instances under a tight budget. However, in some scenarios, requesters may be willing to label fewer instances but of higher quality. Moreover, they may have different requirements on quality for different tasks. To address these challenges, we propose a flexible budget allocation framework called Requallo. Requallo allows requesters to set their specific requirements on the labeling quality and maximizes the number of labeled instances that achieve the quality requirement under a tight budget. The budget allocation problem is modeled as a Markov decision process and a sequential labeling policy is produced. The proposed policy greedily searches for the instance to query next as the one that can provide the maximum reward for the goal. The Requallo framework is further extended to consider worker reliability so that the budget can be better allocated. Experiments on two real-world crowdsourcing tasks as well as a simulated task demonstrate that when the budget is tight, the proposed Requallo framework outperforms existing state-of-the-art budget allocation methods from both quantity and quality aspects. Qi Li 0012, Fenglong Ma, Jing Gao 0004, Lu Su 0001, Christopher J. Quinn |
WSDM | 2 |
| 2015 | FaitCrowd: Fine Grained Truth Discovery for Crowdsourced Data AggregationabstractIn crowdsourced data aggregation task, there exist conflicts in the answers provided by large numbers of sources on the same set of questions. The most important challenge for this task is to estimate source reliability and select answers that are provided by high-quality sources. Existing work solves this problem by simultaneously estimating sources' reliability and inferring questions' true answers (i.e., the truths). However, these methods assume that a source has the same reliability degree on all the questions, but ignore the fact that sources' reliability may vary significantly among different topics. To capture various expertise levels on different topics, we propose FaitCrowd, a fine grained truth discovery model for the task of aggregating conflicting data collected from multiple users/sources. FaitCrowd jointly models the process of generating question content and sources' provided answers in a probabilistic model to estimate both topical expertise and true answers simultaneously. This leads to a more precise estimation of source reliability. Therefore, FaitCrowd demonstrates better ability to obtain true answers for the questions compared with existing approaches. Experimental results on two real-world datasets show that FaitCrowd can significantly reduce the error rate of aggregation compared with the state-of-the-art multi-source aggregation approaches due to its ability of learning topical expertise from question content and collected answers. Fenglong Ma, Yaliang Li, Qi Li 0012, Minghui Qiu, Jing Gao 0004, Shi Zhi, Lu Su 0001, Bo Zhao 0001, Heng Ji 0001, Jiawei Han 0001 |
KDD | 1 |