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Costas A. Anastassiou

dblp:91/6231 · DBLP profile ↗
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3ranked-venue papers
0as first author
1since 2021 · last 2025
0000-0002-6793-0611ORCID · corroborated

Domains — the database's venue-derived domains; a paper can count in several

Applied, interdisciplinary, general and emerging computing · 2Artificial intelligence and machine learning · 1 · 1 since 2021

Expertise — from the expertise taxonomy: the topics of the expert's papers under the CCF categories. A weight counts papers with recency: 1 for a paper about the topic, 0.3 when the topic is its context, halved every five years.

Interdisciplinary, comprehensive, and emerging computing
1 paper
Bioinformatics and computational biology · 50% Computational science and engineering · 50%
Artificial intelligence
1 paper
Deep learning architectures and training · 100%

Topics — the 3 heaviest of 3, each with the papers that count most for it

TopicWeightPapersLastEvidence papers
Bioinformatics and computational biology
computational neuroscience
0.912025
NOBLE - Neural Operator with Biologically-informed Latent Embeddings to Capture Experimental Variability in Biological Neuron Models · NeurIPS 2025
Computational science and engineering › scientific machine learning
neural operator
0.912025
NOBLE - Neural Operator with Biologically-informed Latent Embeddings to Capture Experimental Variability in Biological Neuron Models · NeurIPS 2025
Machine learning › Deep learning architectures and training
neural operator
0.312025
NOBLE - Neural Operator with Biologically-informed Latent Embeddings to Capture Experimental Variability in Biological Neuron Models · NeurIPS 2025

Methods — techniques the papers use, named apart from their topics

neural operator · 1.7frequency-modulated embedding · 1.7
YearPublicationVenuePosition
2025 NOBLE - Neural Operator with Biologically-informed Latent Embeddings to Capture Experimental Variability in Biological Neuron Models
abstract
Characterizing the cellular properties of neurons is fundamental to understanding their function in the brain. In this quest, the generation of bio-realistic models is central towards integrating multimodal cellular data sets and establishing causal relationships. However, current modeling approaches remain constrained by the limited availability and intrinsic variability of experimental neuronal data. The deterministic formalism of bio-realistic models currently precludes accounting for the natural variability observed experimentally. While deep learning is becoming increasingly relevant in this space, it fails to capture the full biophysical complexity of neurons, their nonlinear voltage dynamics, and variability. To address these shortcomings, we introduce $\texttt{NOBLE}$, a neural operator framework that learns a mapping from a continuous frequency-modulated embedding of interpretable neuron features to the somatic voltage response induced by current injection. Trained on synthetic data generated from bio-realistic neuron models, $\texttt{NOBLE}$ predicts distributions of neural dynamics accounting for the intrinsic experimental variability. Unlike conventional bio-realistic neuron models, interpolating within the embedding space offers models whose dynamics are consistent with experimentally observed responses. $\texttt{NOBLE}$ enables the efficient generation of synthetic neurons that closely resemble experimental data and exhibit trial-to-trial variability, offering a $4200$× speedup over the numerical solver. $\texttt{NOBLE}$ is the first scaled-up deep learning framework that validates its generalization with real experimental data. To this end, $\texttt{NOBLE}$ captures fundamental neural properties in a unique and emergent manner that opens the door to a better understanding of cellular composition and computations, neuromorphic architectures, large-scale brain circuits, and general neuroAI applications.
Luca Ghafourpour, Valentin Duruisseaux, Bahareh Tolooshams, Costas A. Anastassiou, Anima Anandkumar
NeurIPS5
2015 Emergence of Slow-Switching Assemblies in Structured Neuronal Networks
abstract
Unraveling the interplay between connectivity and spatio-temporal dynamics in neuronal networks is a key step to advance our understanding of neuronal information processing. Here we investigate how particular features of network connectivity underpin the propensity of neural networks to generate slow-switching assembly (SSA) dynamics, i.e., sustained epochs of increased firing within assemblies of neurons which transition slowly between different assemblies throughout the network. We show that the emergence of SSA activity is linked to spectral properties of the asymmetric synaptic weight matrix. In particular, the leading eigenvalues that dictate the slow dynamics exhibit a gap with respect to the bulk of the spectrum, and the associated Schur vectors exhibit a measure of block-localization on groups of neurons, thus resulting in coherent dynamical activity on those groups. Through simple rate models, we gain analytical understanding of the origin and importance of the spectral gap, and use these insights to develop new network topologies with alternative connectivity paradigms which also display SSA activity. Specifically, SSA dynamics involving excitatory and inhibitory neurons can be achieved by modifying the connectivity patterns between both types of neurons. We also show that SSA activity can occur at multiple timescales reflecting a hierarchy in the connectivity, and demonstrate the emergence of SSA in small-world like networks. Our work provides a step towards understanding how network structure (uncovered through advancements in neuroanatomy and connectomics) can impact on spatio-temporal neural activity and constrain the resulting dynamics.
Michael T. Schaub, Yazan N. Billeh, Costas A. Anastassiou, Christof Koch, Mauricio Barahona
PLoS Comput. Biol.3
2015 Physiology of Layer 5 Pyramidal Neurons in Mouse Primary Visual Cortex: Coincidence Detection through Bursting
abstract
L5 pyramidal neurons are the only neocortical cell type with dendrites reaching all six layers of cortex, casting them as one of the main integrators in the cortical column. What is the nature and mode of computation performed in mouse primary visual cortex (V1) given the physiology of L5 pyramidal neurons? First, we experimentally establish active properties of the dendrites of L5 pyramidal neurons of mouse V1 using patch-clamp recordings. Using a detailed multi-compartmental model, we show this physiological setup to be well suited for coincidence detection between basal and apical tuft inputs by controlling the frequency of spike output. We further show how direct inhibition of calcium channels in the dendrites modulates such coincidence detection. To establish the singe-cell computation that this biophysics supports, we show that the combination of frequency-modulation of somatic output by tuft input and (simulated) calcium-channel blockage functionally acts as a composite sigmoidal function. Finally, we explore how this computation provides a mechanism whereby dendritic spiking contributes to orientation tuning in pyramidal neurons.
Adam Sol Shai, Costas A. Anastassiou, Matthew E. Larkum, Christof Koch
PLoS Comput. Biol.2